Names & Information
Knowledge of BnaA06G0328400GG:
| Gene Name | BnaA06G0328400GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: probable disease resistance protein At5g66900 [Brassica rapa] |
| Best Hit (SwissProt) | Probable disease resistance protein At5g66900 OS=Arabidopsis thaliana GN=At5g66900 PE=3 SV=1 |
| NT seq | Len:2466 nt ATGAGCGATTGGCTTGGGGGAGCTTTGGTCTCTGAGGTTCTGAAAGGTTTGATCCAAGAGGCTAAGACGATGATAGACTT CAAACTATTGTCTGAAGATCTCGCATCAACTATGGAGAGAATGATTCCTCTTACGGAACAGATCGATACGATCCAAGGTA AGGCAGACTTCTTTGATTATGGGGATCTCAAGGTACTGAAGCAAACCATCCAAAGAGCTAGGAAAGTGCTTGATAAGTGT CAACGAGGAGGCGTCTGGTTTTACGAGAAACCTCTGGTCTCAAGAAAGATTAAGGGAATCAATAAGGATATGGTCAAGTT CTGCCAGATGGACCTGCAGCTTCATCAGTACAGGAACCAGTTGGGATTGTCCGTTGTGGTGGGGAACATTGATGATAAGG TGGAGGGTTGGAGTAAGAGAATGGACAGCTTGAGTGTTGCTCCTGTGCCAGCTTTTACGGATCATCTTTGTTCTGTTCCA AAGCTTGATAAGCCTCCCGTTGGATTGGATTGGCCTTTGATGGACCTTAAGAAGAGATTCATTGACAATACTACTGCGGC TAGTCTCGTGGTGTCTGCTCCTCCGGGGTGCGGCAAGACCACTCTCGTTACCCACCTTTGCAACAATGTAGATGTCAAAA GGCATTTCAAGCATATCTTGTTTAATGTTGTGTCAAGTACTCCTAACTTTAGGACCATAGTACAGAATCTAATCCAGTAC AACGGTCACGCTCCGCAAACGTTTGAGAACGATACTCAAGCAACCGTTGCCTTGAGAAAAGTGCTGGAGAAACTCACTGA AGACGGTGGTCCTATATTGTTGGTGTTGGATGATGTCTGGCAGGGAGCTGATTCTTTCCTTGAGAAATTTCGTATTAGCG TACGGAATTATAAGGTTTTGGTGACTTCTAGGTCTGAGTTTCGGAGCTTTGGCCCCACTTATAGTCTGAAACCTTTGGAA TATGAAAATGCCAGAGCCCTTCTCGTTCAATGGGCATCACGGCCTATTCCTAACAACGCCTCTCCAGATGAGTACGAAAA TCTTCTCAAAAAGATATTGAAACGTTGCAATGGATTCCCAATCGTAATTGAAGTAGTTGGCGTTTCACTTAAGGGAAAAT CTATAAATACATGGAAAGGCCAAGTGGAGAGCTGGTCTGGAGGAAAAAAAACAATTCTAGATAGCCCTCGGCCTAGTGTG CTTCAATGTCTGCAGCCTAGCTTCAATGCCCTGGATCCTGATCTTAAGGAGTGTTTCATGGACATGGGCTCATTTCTTGA GGACCAAAAGATACGTGCTTCTGTAATTATTGACATATGGATGGAACTATACGGTATTAGCAGCAGTGTCGTGTGCATGA AGTACCTTGAAGACCTTGCCTCCCAGAATCTACTTAAACTTGTTCCTCTCGGAAATGAGCAGGAAGAGGGTTTCTACAAT GAGTATTTAGTCACTCAACATGATATCCTTAGGGAGTTGGCTATCCATCAAAGCGGATTAGAAACATTCTTTGAAAGAAA AAGATTGAATTTGGAGATAAGAGAGGATCAATTTCCAGACTGGTGTTGTTTGAATCAAATGGAGCCTATTATCATCAATG CCTCTCTCTTGTCTATCACTACAGATGATTTGTTCTCAGCGAATTGGATTGAAATGGAATGTCCCAATGTTGAGACTTTG ATTCTCAACATCTCTTCACAAAACTTTGCATTACCGAGCTTCATTGCTGGAATGAAGAAGCTAAAGGTTCTGATAATCAC AAACCACGGTTCTTATCCAGCGAGACTGACCAAATTCTCTTGCCTCAGCTTATTACCGAACCTGAAACGGATCAGACTGG AGAAAGTTTCAGTAACGTTGCTGGACATTCTCCACATGCAGCTCGTCAGACTGAAGAAGTTGTCTTTGGTTATGTGTAGC TTCGGTGAGGATTTCTACGACATTGAAGATGAAACAGTAGATGTCTCTAGAGCTCTTCCTAGTTTACAAGAGATCGATAT AGACTACTGCTACGATCTTGATGAGGTGCCGTATTGGGTCTGTGAAGTTGTTTCGTTGAAGTCACTTAGCATCACGAATT GTAACAAGCTCTCTCTACTTCCTGAAGCTATAGGCAACTTGAGTAGACTACAAGTGTTGAGGCTGAGTTCTTGTATTAAT CTCTCTGCGCTGCCTGAAACCATGGAGAGACTCGGGCAATTGCAGTTTCTGGATATTTCTCATTGCTTAGGACTGAGAAA GTTGCCTCTAGAGATTGGGAAGCTGCAGAAGCTGAAGAAGATGTCGATGAGGAAATGTTGGAGATGCCAGCTGCCGGACT CAGTGAAGAATCTAGAGGATCTGGTGGTTAAATGCGATGAAGAAACTGGGTTGGTCTTGTGGGAAAGGTTGAAGCCGAAA ATGAGAAGCTTGAGAGTTCATGTGGAGGAAATAGAGCATAACCTGAACTTACTTCATATGTTTTAA |
| AA seq | Len:822 aa MSDWLGGALVSEVLKGLIQEAKTMIDFKLLSEDLASTMERMIPLTEQIDTIQGKADFFDYGDLKVLKQTIQRARKVLDKC QRGGVWFYEKPLVSRKIKGINKDMVKFCQMDLQLHQYRNQLGLSVVVGNIDDKVEGWSKRMDSLSVAPVPAFTDHLCSVP KLDKPPVGLDWPLMDLKKRFIDNTTAASLVVSAPPGCGKTTLVTHLCNNVDVKRHFKHILFNVVSSTPNFRTIVQNLIQY NGHAPQTFENDTQATVALRKVLEKLTEDGGPILLVLDDVWQGADSFLEKFRISVRNYKVLVTSRSEFRSFGPTYSLKPLE YENARALLVQWASRPIPNNASPDEYENLLKKILKRCNGFPIVIEVVGVSLKGKSINTWKGQVESWSGGKKTILDSPRPSV LQCLQPSFNALDPDLKECFMDMGSFLEDQKIRASVIIDIWMELYGISSSVVCMKYLEDLASQNLLKLVPLGNEQEEGFYN EYLVTQHDILRELAIHQSGLETFFERKRLNLEIREDQFPDWCCLNQMEPIIINASLLSITTDDLFSANWIEMECPNVETL ILNISSQNFALPSFIAGMKKLKVLIITNHGSYPARLTKFSCLSLLPNLKRIRLEKVSVTLLDILHMQLVRLKKLSLVMCS FGEDFYDIEDETVDVSRALPSLQEIDIDYCYDLDEVPYWVCEVVSLKSLSITNCNKLSLLPEAIGNLSRLQVLRLSSCIN LSALPETMERLGQLQFLDISHCLGLRKLPLEIGKLQKLKKMSMRKCWRCQLPDSVKNLEDLVVKCDEETGLVLWERLKPK MRSLRVHVEEIEHNLNLLHMF* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | hypothetical protein; K19613 leucine-rich repeat protein SHOC2 (A) |