Names & Information
Knowledge of BnaA06G0340800ZS:
| Gene Name | BnaA06G0340800ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaA06g28070D [Brassica napus] |
| Best Hit (SwissProt) | Probable disease resistance protein At5g66900 OS=Arabidopsis thaliana GN=At5g66900 PE=3 SV=1 |
| NT seq | Len:2466 nt ATGAGCGATTGGCTTGGGGGAGCTTTGGTCTCTGAGGTTCTGAAAGGTTTGATCCAAGAGGCTAAGACGATGATAGACTT CAAACTATTGTCTGAAGATCTCGCATCAACTATGGAGAGAATGATTCCTCTTACGGAACAGATCGATACGATCCAAGGTA AGGCAGACTTCTTTGATCATGGGGATCTCAAGGTACTGAAGCAAACCATCCAAAGAGCTAGGAAAGTGCTTGATAAGTGT CAACGAGGAGGCGTCTGGTTTTACGAGAAACCTCTGGTCTCAAGAAAGATTAAGGGAATCAATAAGGATATGGTCAAGTT CTGCCAGATGGACCTGCAGCTTCATCAGTACAGGAACCAGTTGGGATTGTCCGTTGTGGTGGGGAACATTGATGATAAGG TGGAGGGTTTGAGTAAGAGAATGGACAGCTTGAGTGTTGCTCCTGTTCCAGTTTTTACGGATCATTTTTGTTCTGTTCCA AAGCTTGATAAGCCTCCCGTTGGATTGGATTGGCCTTTGATGGACCTTAAGAAGAGATTCATTGACAATACTACTGCGGC TAGTCTCGTGGTGTCTGCTCCTCCTGGGTGCGGCAAGACCACTCTCGTTACCCACCTTTGCAACAATGTACATGTCAAAA GGCATTTCAAGCATATCTTGTTTAATGTTGTGTCAAGTACTCCTAACTTTAGGACCATAGTACAGAATCTAATCCAGTAC AACGGTCACGCTCCGCAAACGTTTGAGAACGATACTCAAGCAACCGTTGCCTTGAGAAAACTGCTGGAGAAACTCACTGA AGACGGTGGTCCTATATTGTTGGTGTTGGATGATGTCTGGCAGGGAGCTGATTCTTTCCTTGAGAAATTTCGTATTAGCG TACGGAATTATAAGGTTTTGGTGACTTCTAGGTCTGAGTTTCAGAGCTTTGGCCCCACTTATTGTCTGAAACCTTTGGAA TATGAAAATGCCAGAGCCCTTCTCGTTCAATGGGCATCACGGCCTGTTCCTAACAACGCCTCTCCAGATGAGTACGAAAA TCTTCTCAAAAAGATATTGAAACGTTGCAATGGATTCCCAATCGTAATTGAAGTAGTTGGCGTTTCACTTAAGGGAAAAT CTATAAATACATGGAAAGGCCAAGTGGAGAGCTGGTCTGGAGGGAAAAAAACAATTCTCGATAGCCCTCGGCCTAGCGTG CTTCAATGTCTGCAGCCTAGCTTCAATGCCCTGGATCCTGATCTTAAGGAGTGTTTCATGGACATGGGCTCATTTCTTGA GGACCAAAAGATACGTGCTTCTGTTATTATTGACATATGGATGGAACTATACGGTATTAGCAGCAGTGTCGTGTGCATGA AGTACCTTGAAGACCTTGCCTCCCAGAATCTACTTAAACTTGTTCCTCTCGGAAATGAGCAGGAAGAGGGTTTCTACAAT GAGTATTTAGTCACTCAACATGATATCCTCAGGGAGTTGGCTATCCATCAAAGCGGATTAGAAACATTCTTTGAAAGAAA AAGATTGAATTTGGAGATAAGAGAGGATCAATTTCCAGACTGGTGTTGTTTGAATCAAATGGAGCCTATTATCATCAATG CCTCTCTCTTGTCTATCACTACAGATGATTTGTTCTCAGCGAATTGGATTGAAATGGAATGTCCCAATGTTGAGACTTTG ATTCTCAACATCTCTTCACAAAACTTTGCATTACCGAGCTTCATTGCTGGAATGAAGAAGCTAAAGGTTCTGATAATCAC AAACCACGGTTCTTATCCAGCGAGACTGACCAAATTCTCGTGCCTCAGCTTATTACCGAACCTGAAACGAATCAGACTGG AGAAAGTTTCAGTAACGTTGCTGGACATTCTCCACTTGCAGCTCGTCAGACTGAAGAAGTTGTCTTTGGTTATGTGTAGC TTCGGTGAGGATTTCTACGACATTGAAGATGAAACAGTAGATGTCTCTAGAGCTCTTCCTAGCTTACAAGAGATCGATAT AGACTATTGCTACGATCTTGATGAGGTGCCGTATTGGGTGTGTGAAGTTGTTTCGTTGAAGTCACTTAGCATCACGAATT GTAACAAGCTCTCTCTACTTCCTGAAGCTATAGGCAACTTGAGAAGACTACAAGTGTTGAGGCTGAGTTCTTGTATTAAT CTCTCTGAGCTGCCTGAAACCATGAAGAGACTCGGGCAATTGCAGTTTCTGGATATTTCTCATTGCTTAGGACTGAGAAA GTTGCCTCTAGAGATTGGGAAGCTGCAGAAGCTGAAGAAGATGTCGATGAGGAAATGTTGGAGATGCCAGCTGCCGGACT CAGTGAAGAATCTAGAGGATCTGGTGGTTAAATGCGATGAAGAAACTGGGTTGGTCTTGTGGGAAAGGTTGAAGCCGAAA ATGAGAAGCTTGAGAGTTCATGTGGAGGAAATGGAGCATAATCTGAACTTACTTCATATGTTTTAA |
| AA seq | Len:822 aa MSDWLGGALVSEVLKGLIQEAKTMIDFKLLSEDLASTMERMIPLTEQIDTIQGKADFFDHGDLKVLKQTIQRARKVLDKC QRGGVWFYEKPLVSRKIKGINKDMVKFCQMDLQLHQYRNQLGLSVVVGNIDDKVEGLSKRMDSLSVAPVPVFTDHFCSVP KLDKPPVGLDWPLMDLKKRFIDNTTAASLVVSAPPGCGKTTLVTHLCNNVHVKRHFKHILFNVVSSTPNFRTIVQNLIQY NGHAPQTFENDTQATVALRKLLEKLTEDGGPILLVLDDVWQGADSFLEKFRISVRNYKVLVTSRSEFQSFGPTYCLKPLE YENARALLVQWASRPVPNNASPDEYENLLKKILKRCNGFPIVIEVVGVSLKGKSINTWKGQVESWSGGKKTILDSPRPSV LQCLQPSFNALDPDLKECFMDMGSFLEDQKIRASVIIDIWMELYGISSSVVCMKYLEDLASQNLLKLVPLGNEQEEGFYN EYLVTQHDILRELAIHQSGLETFFERKRLNLEIREDQFPDWCCLNQMEPIIINASLLSITTDDLFSANWIEMECPNVETL ILNISSQNFALPSFIAGMKKLKVLIITNHGSYPARLTKFSCLSLLPNLKRIRLEKVSVTLLDILHLQLVRLKKLSLVMCS FGEDFYDIEDETVDVSRALPSLQEIDIDYCYDLDEVPYWVCEVVSLKSLSITNCNKLSLLPEAIGNLRRLQVLRLSSCIN LSELPETMKRLGQLQFLDISHCLGLRKLPLEIGKLQKLKKMSMRKCWRCQLPDSVKNLEDLVVKCDEETGLVLWERLKPK MRSLRVHVEEMEHNLNLLHMF* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | hypothetical protein; K19613 leucine-rich repeat protein SHOC2 (A) |