Names & Information
Knowledge of BnaA06G0366300QU:
| Gene Name | BnaA06G0366300QU |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: probable disease resistance protein At5g66900 [Brassica rapa] |
| Best Hit (SwissProt) | Probable disease resistance protein At5g66900 OS=Arabidopsis thaliana GN=At5g66900 PE=3 SV=1 |
| NT seq | Len:2418 nt ATGAGGCAGAGTCGGATCATGGAGTTACTGGTTTTTGTGTCTGTGTCTGATTCAAACACGAGTGAAAAGAGAGTGAAATT GTGCCAAGATTTCATGCACAACACCGATTTGGACGATGATCAGCAGATAGTAGTGAATCCTTATAAAATAGAAATGTTGG TGATTCAGATTCTACAGACAAAATCTGAGAGTTATAAGTTTTTGGGGCTTGTGAGAGAAGAAATGAACGATGTGGTTAGT TTGGGGGTAGGTTCTGTTGCAGGAGCTGTGGTCTCTGAGCTCCTGAAAGTTGTTATTGAAGAGGCTAAGATGGTGTTGAC TTTCAAATCTGTGTATATGGAGCTTGCATCGACGATGGAGGATGTGCTTCCGATAATCGAAGAGATCGAGATGTTGCCAG GTGCTGGAGAACTAAAGAAATTCAAGGATATAATCGATGAAGCTCTTGTACTGGTTCGGAAGTGTTCACAAGTCAAGCGG TGGAACCTACCCTCAAAAGCTAAATATACAAGAAAAATAGACGAAATCAACAAGAAGATGCTCAAGTACTGTCAGATTCA ACTTCAGCTTATTATGCTTCGGAACCAACGGCTGATGATGCGTCAACAGGGATTGTTAGCTTGCCAGATTGTACCTGACG AGGTGTCTACCCTGCCCCCTGACATGCTATCTGACATGCCGCCCAACGTGCCGTCTGACTGTCTGCCCGTGTATACGAGG GAAGCCATTGAGAGTCATCTCAAAAGCATCAAAAAGAAGCTCGATTATTTTACTGTTTCTCCGCCTGTTTATGTGGATCT CTGTTCGGTCCCCAAGCTTGAAAAGGTTCTCGTTGGCTTGGATTTGCCACTGATGGAGGTAAAGAAGAAGTTCCTTGGTG ATGATGATCTCGTGGTCTCTGCTCCACCCGGGTGTGGGAAAACCACTTTGGTTACTCAGCTTTGTCATGATGATGAGATC AAAGGATATCACACTCTGAAATGTTGCTATGGATTACCACTTTTGATTGAAGTAATCGGTGTTCAGCTTGTAAGAAAATC TATAGATGGTTTAGGAGAAGTGATAAGCCGGTCTGAAGAGGAAACAGTTCTTGATCTTCAGCTTATAAGAAAATTTGTAA ATTGGGCCACAGACAAAGTGAAAAGCTGGTTTGAAGAGAAAACAATTCTTGATAATCCCCAACCTAATGTGCTCGAATGG CTGCAGCCTAGCTTGAATATCTTGGACCCTCATCTTAAAGATTTTTTTTTGGACATTGGCTCATTTTTTACACAAGGAAA GATACGTGTTTCCAGTATAATTGACATATGGATGGAATTATACGGTAAAAGTAGTAAAAGTAGTGCCGTGTACGTGAAGT ACCTCAATGAACTGGCTTTCCGTAATCTTCTTGAACTTGATCCTCCAAGGATAAGTGAAAACAAAGACGGTTTCTACGAT GGATTCTTAGATAGTCAACATAGTATTCTGAGGGACTTGGCTATCTGCCAAAGCAAATCTGAGGAACACTATGAAAGAGA AAGGCTCAACCTGGAGATAAGAGAGGATACATTTCCAGATTGGTGTTTGGATCTAATGCAGCCTATAAGTGCTCGTCTTT TGTCTATCTCTACAGATGATTTGTTCTCATCGACGTGGGCTGAAATGGATTGCCCCAATGTTGAGGCTTTAGTTCTTAAT CTCTCCTCATCAAGCTATGCATTACCAAACTTCATTGCAACTATGAAGAAACTAAAGGTTGTGGCTATCATAAATCACGG TCTTGGTCCTGCAAAACTGACCAACTTGTCGTGTCTCAGCTCATTACCCAACTTAAAACGGATCATATTTGAAAATGTTT CAATCACCATGCTGGACGTTCTCCTTTCACGACTCGGCAGTCTCGAGAAGCTATCTTTGTTCATGTGCAGAGTCGGCCTT GAGGTTTCCTACAACATAAAAGAGATAGCTATCCCTGAAGCTCTACCGAGTTTACAGGAGATTGACATAAATTATTGCTA TGATCTTGATGAGTTACCGGATTGGGTCTGTGAAGTTGTTTCATTGAAGAAACTAAGCATCACAAACTGTGGCAAGTTCT CTGTACTTCCAAAGTCTATAGGTAACTTGAGTAATCTTGAAGTGTTGAGGTTGTGTTCTTGTATTAATCTCTATGAGCTG CCGGAATCAACTGAGAGGCTCAGCAATTTACGGTTTCTGGATATTTCTGATTGTTTGGCACTGAAGAAGTTGCCTTTAGA GATTGGGAAGTTGCAGAAGCTGAAAAAAATCTCGATGAGGATGTGTTTGGGATGCGAATTACCGGATTCTGTGAAGAATT TAAGCAATTTGAAGGTAGATTGTGATGAAGATACTCGACTGTTGTGGGAAAGGTTGAAGCCAGAAATGGGAAGTTGGAGA ATCCTGATGGGAATGTAG |
| AA seq | Len:806 aa MRQSRIMELLVFVSVSDSNTSEKRVKLCQDFMHNTDLDDDQQIVVNPYKIEMLVIQILQTKSESYKFLGLVREEMNDVVS LGVGSVAGAVVSELLKVVIEEAKMVLTFKSVYMELASTMEDVLPIIEEIEMLPGAGELKKFKDIIDEALVLVRKCSQVKR WNLPSKAKYTRKIDEINKKMLKYCQIQLQLIMLRNQRLMMRQQGLLACQIVPDEVSTLPPDMLSDMPPNVPSDCLPVYTR EAIESHLKSIKKKLDYFTVSPPVYVDLCSVPKLEKVLVGLDLPLMEVKKKFLGDDDLVVSAPPGCGKTTLVTQLCHDDEI KGYHTLKCCYGLPLLIEVIGVQLVRKSIDGLGEVISRSEEETVLDLQLIRKFVNWATDKVKSWFEEKTILDNPQPNVLEW LQPSLNILDPHLKDFFLDIGSFFTQGKIRVSSIIDIWMELYGKSSKSSAVYVKYLNELAFRNLLELDPPRISENKDGFYD GFLDSQHSILRDLAICQSKSEEHYERERLNLEIREDTFPDWCLDLMQPISARLLSISTDDLFSSTWAEMDCPNVEALVLN LSSSSYALPNFIATMKKLKVVAIINHGLGPAKLTNLSCLSSLPNLKRIIFENVSITMLDVLLSRLGSLEKLSLFMCRVGL EVSYNIKEIAIPEALPSLQEIDINYCYDLDELPDWVCEVVSLKKLSITNCGKFSVLPKSIGNLSNLEVLRLCSCINLYEL PESTERLSNLRFLDISDCLALKKLPLEIGKLQKLKKISMRMCLGCELPDSVKNLSNLKVDCDEDTRLLWERLKPEMGSWR ILMGM* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | -- |
| Pfam | Arabidopsis broad-spectrum mildew resistance protein RPW8 |
| KEGG | hypothetical protein; K19613 leucine-rich repeat protein SHOC2 (A) |