Names & Information
Knowledge of BnaA06G0381000NO:
| Gene Name | BnaA06G0381000NO |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: probable disease resistance protein At5g66900 [Brassica rapa] |
| Best Hit (SwissProt) | Probable disease resistance protein At5g66910 OS=Arabidopsis thaliana GN=At5g66910 PE=2 SV=1 |
| NT seq | Len:3567 nt ATGAACGATGTGGTAAGTTTGGGAGTAGGTTCTGTTGCAGGAGCTGTGGTCTCTGAGCTCCTCAAAGTCGTTATTGAAGA GGCTAAGATGGTGGTGTCGTTCAAATCTGTGTATATGGAGCTCGCATCGACGATGGAGGATGTGCTTCCAGCAGTCATAG AGATCGAGATGTTGCAAGGTGCAGGAGAACTAAAGAAACTCAAGGATATAATCGATGAAGCTCTTGTACTGGTTCGTAAG TGTTCACAAGTCAAGCGGTGGAACCTACCCTCAAAAGCTAAATATACAAGAAAAATAGAGGAAATCAACAAGAAGGTGCT CAAGTTCTGTCAGATTCAACTTCAGCTTATTATGCTTCGGAACCAACGGCTGATTATGCATCAATCCGGATTTTTTTCTT ACATGAGTATGCCGTTGGAGGGGTCTACCATGATGTCTGATATTCTGCCTGAGGATACGAGGGAAGCCATTGAGAGTCAT CTCAAAAGCATCAATATGAAGATCGATGGTTTGAGTGTTTATCCGCCTGTTTATAGGGATCTTTGTTCGGTCCCCAAGCT TGATAAGGTTCTCGTTGGTTTGGATTTGCCATTGTTGGAAATAAAGACGAAGCTCTTTAAGGATGATGATCCAGTGGTTA GTCTTGTGGTCTCTGCTCCTCCCGGGTGCGGGAAAACCACATTGGTCACTCAGCTTTGTCATGATGATGAGATCAAAGAA AAGTTCGAGTATATCTTCTTTTGTGTCATGTCAAGTGCTCCTACCTTCAGAACCATAGTACAGAATTTACTCCAGCACAA CGGTTATGAAGCACCTACATTTGAGAACGATTCTCAAGCAGCTGATGGTTTAAGAAATCTGCTTGAGGAACTTCAAGAAG AGGGTCCTATATTGTTGATTTTGAAACGTTGCTATGGATTTCCATTCTTAATTGAAGAAATTGGCGTTCGACTTGTAAAA GAAGCTATGAGGCAGAGTCGGATCATGGAGTTACTGGTTTTTGTGTCTGTGTCTGATTCAAACACGAGTGAAAAGAGAGT GAAATTGTGCCAAGATTTCATGCACAACACCGATTTGGACGATGATCAGCAGATAGTAGTGAATCCTTATAAAATAGAAA TGTTGGTGATTCAGATTCTACAGACAAAATCTGAGAGTTATAAGTTTTTGGGGCTTGTGAGAGAAGAAATGAACGATGTG GTTAGTTTGGGGGTAGGTTCTGTTGCAGGAGCTGTGGTCTCTGAGCTCCTGAAAGTTGTTATTGAAGAGGCTAAGATGGT GTTGACTTTCAAATCTGTGTATATGGAGCTTGCATCGACGATGGAGGATGTGCTTCCGATAATCGAAGAGATCGAGATGT TGCCAGGTGCTGGAGAACTAAAGAAATTCAAGGATATAATCGATGAAGCTCTTGTACTGGTTCGGAAGTGTTCACAAGTC AAGCGGTGGAACCTACCCTCAAAAGCTAAATATACAAGAAAAATAGACGAAATCAACAAGAAGATGCTCAAGTACTGTCA GATTCAACTTCAGCTTATTATGCTTCGGAACCAACGGCTGATGATGCGTCAACAGGGATTGTTAGCTTGCCAGATTGTAC CTGACGAGGTGTCTACCCTGCCCCCTGACATGCTATCTGACATGCCGCCCAACGTGCCGTCTGACTGTCTGCCCGTGTAT ACGAGGGAAGCCATTGAGAGTCATCTCAAAAGCATCAAAAAGAAGCTCGATTATTTTACTGTTTCTCCGCCTGTTTATGT GGATCTCTGTTCGGTCCCCAAGCTTGAAAAGGTTCTCGTTGGCTTGGATTTGCCACTGATGGAGGTAAAGAAGAAGTTCC TTGGTGATGATGATCTCGTGGTCTCTGCTCCACCCGGGTGTGGGAAAACCACTTTGGTTACTCAGCTTTGTCATGATGAT GAGATCAAAGAAAAATTCGAGTACATCTTCTTTTGTGATGTGTCAAGGGTTCCTACCTTCAGGACCATCGTACAGACTTT ACTCCAGCACAGCGGTTACGAAGCACCAACATTTGAGAACGATTTTCAAGCAGTTGGTGGCTTAAGGAAGCTCATTGAGG AACTTACAGAAGATGGTCCTATATTGTTGGTGTTGGATGATACTCTGAAATGTTGCTATGGATTACCACTTTTGATTGAA GTAATCGGTGTTCAGCTTGTAAGAAAATCTATAGATGGTTTAGGAGAAGTGATAAGCCGGTCTGAAGAGGAAACAGTTCT TGATCTTCAGCTTATAAGAAAATTTGTAAATTGGGCCACAGACAAAGTGAAAAGCTGGTTTGAAGAGAAAACAATTCTTG ATAATCCCCAACCTAATGTGCTCGAATGGCTGCAGCCTAGCTTGAATATCTTGGACCCTCATCTTAAAGATTTTTTTTTG GACATTGGCTCATTTTTTACACAAGGAAAGATACGTGTTTCCAGTATAATTGACATATGGATGGAATTATACGGTAAAAG TAGTAAAAGTAGTGCCGTGTACGTGAAGTACCTCAATGAACTGGCTTTCCGTAATCTTCTTGAACTTGATCCTCCAAGGA TAAGTGAAAACAAAGACGGTTTCTACGATGGATTCTTAGATAGTCAACATAGTATTCTGAGGGACTTGGCTATCTGCCAA AGCAAATCTGAGGAACACTATGAAAGAGAAAGGCTCAACCTGGAGATAAGAGAGGATACATTTCCAGATTGGTGTTTGGA TCTAATGCAGCCTATAAGTGCTCGTCTTTTGTCTATCTCTACAGATGATTTGTTCTCATCGACGTGGGCTGAAATGGATT GCCCCAATGTTGAGGCTTTAGTTCTTAATCTCTCCTCATCAAGCTATGCATTACCAAACTTCATTGCAACTATGAAGAAA CTAAAGGTTGTGGCTATCATAAATCACGGTCTTGGTCCTGCAAAACTGACCAACTTGTCGTGTCTCAGCTCATTACCCAA CTTAAAACGGATCATATTTGAAAATGTTTCAATCACCATGCTGGACGTTCTCCTTTCACGACTCGGCAGTCTCGAGAAGC TATCTTTGTTCATGTGCAGAGTCGGCCTTGAGGTTTCCTACAACATAAAAGAGATAGCTATCCCTGAAGCTCTACCGAGT TTACAGGAGATTGACATAAATTATTGCTATGATCTTGATGAGTTACCGGATTGGGTCTGTGAAGTTGTTTCATTGAAGAA ACTAAGCATCACAAACTGTGGCAAGTTCTCTGTACTTCCAAAGTCTATAGGTAACTTGAGTAATCTTGAAGTGTTGAGGT TGTGTTCTTGTATTAATCTCTATGAGCTGCCGGAATCAACTGAGAGGCTCAGCAATTTACGGTTTCTGGATATTTCTGAT TGTTTGGCACTGAAGAAGTTGCCTTTAGAGATTGGGAAGTTGCAGAAGCTGAAAAAAATCTCGATGAGGATGTGTTTGGG ATGCGAATTACCGGATTCTGTGAAGAATTTAAGCAATTTGAAGGTAGATTGTGATGAAGATACTCGACTGTTGTGGGAAA GGTTGAAGCCAGAAATGGGAAGTTGGAGAATCCTGATGGGAATGTAG |
| AA seq | Len:1189 aa MNDVVSLGVGSVAGAVVSELLKVVIEEAKMVVSFKSVYMELASTMEDVLPAVIEIEMLQGAGELKKLKDIIDEALVLVRK CSQVKRWNLPSKAKYTRKIEEINKKVLKFCQIQLQLIMLRNQRLIMHQSGFFSYMSMPLEGSTMMSDILPEDTREAIESH LKSINMKIDGLSVYPPVYRDLCSVPKLDKVLVGLDLPLLEIKTKLFKDDDPVVSLVVSAPPGCGKTTLVTQLCHDDEIKE KFEYIFFCVMSSAPTFRTIVQNLLQHNGYEAPTFENDSQAADGLRNLLEELQEEGPILLILKRCYGFPFLIEEIGVRLVK EAMRQSRIMELLVFVSVSDSNTSEKRVKLCQDFMHNTDLDDDQQIVVNPYKIEMLVIQILQTKSESYKFLGLVREEMNDV VSLGVGSVAGAVVSELLKVVIEEAKMVLTFKSVYMELASTMEDVLPIIEEIEMLPGAGELKKFKDIIDEALVLVRKCSQV KRWNLPSKAKYTRKIDEINKKMLKYCQIQLQLIMLRNQRLMMRQQGLLACQIVPDEVSTLPPDMLSDMPPNVPSDCLPVY TREAIESHLKSIKKKLDYFTVSPPVYVDLCSVPKLEKVLVGLDLPLMEVKKKFLGDDDLVVSAPPGCGKTTLVTQLCHDD EIKEKFEYIFFCDVSRVPTFRTIVQTLLQHSGYEAPTFENDFQAVGGLRKLIEELTEDGPILLVLDDTLKCCYGLPLLIE VIGVQLVRKSIDGLGEVISRSEEETVLDLQLIRKFVNWATDKVKSWFEEKTILDNPQPNVLEWLQPSLNILDPHLKDFFL DIGSFFTQGKIRVSSIIDIWMELYGKSSKSSAVYVKYLNELAFRNLLELDPPRISENKDGFYDGFLDSQHSILRDLAICQ SKSEEHYERERLNLEIREDTFPDWCLDLMQPISARLLSISTDDLFSSTWAEMDCPNVEALVLNLSSSSYALPNFIATMKK LKVVAIINHGLGPAKLTNLSCLSSLPNLKRIIFENVSITMLDVLLSRLGSLEKLSLFMCRVGLEVSYNIKEIAIPEALPS LQEIDINYCYDLDELPDWVCEVVSLKKLSITNCGKFSVLPKSIGNLSNLEVLRLCSCINLYELPESTERLSNLRFLDISD CLALKKLPLEIGKLQKLKKISMRMCLGCELPDSVKNLSNLKVDCDEDTRLLWERLKPEMGSWRILMGM* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0006952 |
| Pfam | NB-ARC domain |
| KEGG | hypothetical protein; K19613 leucine-rich repeat protein SHOC2 (A) |