Names & Information
Knowledge of BnaA07G0144400ZS:
| Gene Name | BnaA07G0144400ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaA07g12270D [Brassica napus] |
| Best Hit (SwissProt) | Probable disease resistance protein At5g66900 OS=Arabidopsis thaliana GN=At5g66900 PE=3 SV=1 |
| NT seq | Len:2613 nt ATGAGCGAGATGATTGGGGGAGCTGTGGTCGCTGAGGGTCTGAAACAGTTGATTGCAGAGGCAAAGAAGTTCAAAAATTT CAAACCCTTGTCCAAGGAACTCATATCGACCATGGAGGAATTGGTCCCGTTAACCGAAACGATCAATTGTTTGCAAAACC AGCAGAACCTTGATGCTGGGGAACTAAAGGGGCTGATGGAAAGGATCGAGAAAGCGAAGATTGTGGTTCGTAAATGTCAA GACGTCCCGTTCTTGAAGAGATCTTTGGCCACAAGAGAAATCGAGCAAGTCAATAAGGATATGCTTAATTATTGTCAGAT TGTTATACAGCTTATTCAGTCAAAGAACCAGTTGCAGTCTATGGAGGCCAATAACAACAATTTCCAAACCGTCTTTAAGA AGCTCGACCAATTGAGTGCTCCTGCGCCCGCTTTTAGGCAGCTTTGTTCCGTTCCAGAGCTTAAAACGGCTCCAGTTGGA TTTGCTTTGCCGTTGATGATGCTCAAGAAGAAGCTACTTGATGCTGCCGTGGTCAGACTTGTGGTGTCCGCTCCTGCCGG GTGCGGCAAGACCACGCTAGTTAGGCACCTTTGTCACGACCAAGATATCAAAAGGAAGTTCCAACATATTTTCTACAGCG TTGTGTCAAGTACTCCTAACTTTAGGAAGATAGTACAGCGTTTACTCGAGCACAACGGTCACCAAGCACCCACATTTGAT AACGATACCCAAGCAGCTAATGTCTTAAAAACACTGCTAGAGGAACTTGATGGGAATGATCAGATATTGTTGGTGTTGGA TGATGTTTGGTCGGCTGGAGCGCCGTCTTTTCTTGAGAATTTTCCCACTGACATACCCAATCTCAAGATCTTGCTGACTT CTCGGTTTAACTCGCTTGATTTCGGTGACACTTTTAAATTGGAACCTTTGAAAAAGGAACATGCCAAGACCCTTCTCATT CAATATGCATCGCGTCCTGATCACGCATCTGATGCCGAGTATGAACGTCTTTTCCAGAAGATATTGGAACGATGCGCGGG ATTCCCACTCTTGATCAAAGTAATAGGCGGTTCGCTTAGAAAACAATCTCTAAATCAATGGCAAGGCCAAGTCATAGAAT GGTCTGGAGGAGGCTCGGTTCTTAATAGTCGTGAAGTGATAGAACGTCTGAAGCCTAGTTTCGATGCTCTAGACTCCAAT CTCAAACAGTGTTTCTTGGACATGGGTTTGTTTCTTGAGGACCAAGTAATCCGTGCCTGGATGATAACAGACATATGGGC CGAGTTATATGGTGGTAACGGTAAGACGGAGAAAGATAAAATCATCGTATCTGTGAAATACCTTGAAGACCTTGCCTCCC ATAATCTTCTTGATCTTGTTCCTCTCGGGAAAAAGGAGCACGAAGACGGTTTCTACAATGACTTCTTAGTCACTCAACAT GATATCCTCAGGGAGTTGGCTATCAATCAAAACAAATCAGAAGCAATACTGGAGCTGAAGAGGAAAAGACTGACTCTGGA GATAAGAGATAATAGATTTCCAGACTGGTGTTTGAATTCAATACACCCTGTTGTTGTTAATGCCTCTCTGCTGTCTATCT TTACAGATAATGAATTCTCATCTCCATGGTTTGAGATGGACTGCCCCAATGTTGAGGCTTTAGTTCTTAATATCTCTTCA TCAAACTATGCATTACCTAGCTTCATTGCTACAATGAAGAAACTCAAGGTTGTGATTATCATAAATCACGGTCCTGGTCC TGCCACATTGACCAACTTGTCGTGTCTCAGCTCCTTACCGAAACTGAAAAGGATCAGACTGGAGAAAGTTGCAATCACTT TTCTGGACATTCTCCAGTTGCAGCTCGTCAGTCTGAAGAAGATGTTTTTTGTTATGTGTAGCTTTGGTGAGGTTTCTAAT GACAAAAATGAAATAGACGTCTCCAAAGCTCTATCGAGCTTACAAGAGATTGACATAGACTATTGTTATGATCTCGAGAA GTTGCCTAACTGGATCTCTGAAGCTGTTTCATTGCAGTCACTTAGCATCACAAACTGTCATAAACTCTCTACACTTCCTG AAGCTATAGGCAACTTGAGTAAGTTGGAATTGCTGAGGTTGTCTTCTTGTATTAATCTCACCGAGCTGCCTGAAACTATT GTTAGACTCAGCAACTTGCAGTTTCTGGATATTTCTGATTGCTTAGGATTGAGAAAGTTGCCTGTAGAGATTGGGAGACT GAAGAAGCTGAAGAAGATCTCCATGAACAAGTGTTGGAAATGTGAACTGCCGGATTCAGTGAAGAATCTAGAGAATCTGG AGGTGAAATGCGATGAAGAAACTGCGGTGGTCTTGTGGAAAGGTTTAGAGCAAAAAATGATAAATTTGAAAGTTCAAGTG GAGGAAAGAGAGCACAACCTGAACTTGCTTCGACTGTTTTTAGTTTCAATATTTTCAACTGCTAAAGTGGCAGAAGAGAA AACAGGGCATGACCTCCACTTGTTTCAGAGCATAAACTATCTCTCCGCTACCGGCAATGTCAATTTCAGACTCGGAATCA AAGTCGTCCATGTCATCATCAAGATCAAGATTGTCTGTCATGAAATCGTCTAG |
| AA seq | Len:871 aa MSEMIGGAVVAEGLKQLIAEAKKFKNFKPLSKELISTMEELVPLTETINCLQNQQNLDAGELKGLMERIEKAKIVVRKCQ DVPFLKRSLATREIEQVNKDMLNYCQIVIQLIQSKNQLQSMEANNNNFQTVFKKLDQLSAPAPAFRQLCSVPELKTAPVG FALPLMMLKKKLLDAAVVRLVVSAPAGCGKTTLVRHLCHDQDIKRKFQHIFYSVVSSTPNFRKIVQRLLEHNGHQAPTFD NDTQAANVLKTLLEELDGNDQILLVLDDVWSAGAPSFLENFPTDIPNLKILLTSRFNSLDFGDTFKLEPLKKEHAKTLLI QYASRPDHASDAEYERLFQKILERCAGFPLLIKVIGGSLRKQSLNQWQGQVIEWSGGGSVLNSREVIERLKPSFDALDSN LKQCFLDMGLFLEDQVIRAWMITDIWAELYGGNGKTEKDKIIVSVKYLEDLASHNLLDLVPLGKKEHEDGFYNDFLVTQH DILRELAINQNKSEAILELKRKRLTLEIRDNRFPDWCLNSIHPVVVNASLLSIFTDNEFSSPWFEMDCPNVEALVLNISS SNYALPSFIATMKKLKVVIIINHGPGPATLTNLSCLSSLPKLKRIRLEKVAITFLDILQLQLVSLKKMFFVMCSFGEVSN DKNEIDVSKALSSLQEIDIDYCYDLEKLPNWISEAVSLQSLSITNCHKLSTLPEAIGNLSKLELLRLSSCINLTELPETI VRLSNLQFLDISDCLGLRKLPVEIGRLKKLKKISMNKCWKCELPDSVKNLENLEVKCDEETAVVLWKGLEQKMINLKVQV EEREHNLNLLRLFLVSIFSTAKVAEEKTGHDLHLFQSINYLSATGNVNFRLGIKVVHVIIKIKIVCHEIV* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | putative disease resistance protein RGA3; K19613 leucine-rich repeat protein SHOC2 (A) |