Names & Information
Knowledge of BnaA07G0144500ZS:
| Gene Name | BnaA07G0144500ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: probable disease resistance protein At5g66900 isoform X1 [Brassica rapa] |
| Best Hit (SwissProt) | Probable disease resistance protein At5g66900 OS=Arabidopsis thaliana GN=At5g66900 PE=3 SV=1 |
| NT seq | Len:2373 nt ATGAACAAGGCAACTGAATTGGTGGTAGATGCTGGTGTGGGAGCTGTTGCCTCTGAGATCCTGAAAGTAGTGATTACAGA GGCGAAGCTGGTGTTAGCTTTCAAATCTGTGTCTAAGGATCTCGCATCGACTATGGAGGAATTGGTTCCGATAGTCAGAG AGATCGAACAGACGCAAGGTGTGGAGGAAGTAGAGGAACTAAAGACGCTGAAGGATACTATCGACAAAGCTCGTGTGGTG GTTGAGGAGTGTAAAAGCGTCAAGAAGTGGGAGATACACTTAAAACATTATTATACAAGAAGAGTTTATAAAATCAACAA GAAGATGCTCGACTTCTGTCAGGATCGATCTTATGGATGTTCGCCGCGCGTTTACACGAAGCTTTCTTCAGTTCCCAAGA TTGATGATAAGGTTCATGTTGGACTGGATTGGCCATTGATGAAGCTTAAAATGAAGGTCCTTGATGATTCCCTGGACCGT CTTCTGGTGTCTGCTTTCCCTGGATGCGGAAAGACCACCCTCGTTACTCATCTTTGCCACAACCAAAAAATCAAAGATAA GTTCAACCATATCTTCTATAGCCTAGTGTCAGGTACTCCTAACTTTAGGAAGATAGTGCAAAATTTACTCCAGCACAATG GTTACGAAGCAGTTACATTTGAGAACGATCCTCAAGCAGCTAATGCCTTGATAGATCTGATTGAGGAACTCACAGAAGAC GGTCCTGTATTGTTGGTGTTGGATGATGTGTGGCTTGGAGCTGATGATTTTCTTAAGTATTTTCGGTTCAAGTTACCAGG TTATAAGATTTTGGTGACCTCTCGGTCTGACTTACCGAGTTTTGATTACACTTACCCTTTACAACCTTTGAATGAAAAAG ATGCTAAAGCCCTTCTCCTTCACGTTGCACCGCGGCCTTATAACGCGCCTCAAGCTGAGTATGAAGAACTTCTCCAAAAG ATATTGAAACGTTGCAGTGGACTCCCACTCGTAATTGAAGTAGTTGGCGTCCCACTTAAAGGAAAACCTCTCTATTATTG GAAAGGCCAAGTGGGAAGCTGGTCTGAAGGGAAAACAATTCTTCGTAATCCTCGTCCTAGTGTGCTAGAATGTCTGGAGC CCAGCTTCACTGCCCTGGAACCCCATCTTAAAGACTGTTTCATGGACATGGGCTCATTTCTTGAGGACCAAAAGATACGT GCTTCCGTTATAATTGACATATGGGTGGAACTATATGGTAAAGGTACTCCTGATAGTAGTTTCGAGTACATGAAATACTT GCATGACCTTGCTTCCCAGAACCTGCTTAGACTTATTCCTCTCGGGAGAAATGATCACGAGGATTGTTTCTACAATGAGC TCCTAGTCACTCAACATGATATCTTGAGGGAGCTTGCCATCCATGAAAGCAAATCAGAAGCAGTCCTGGAACGAAAAAGA CTCAGTTTGGTGATACAAGGAGATGACTATCCTGACTTGTCTTTGAGTAAAAGGGAGTCTACCCGCTTCCTCTCTGTCTC TGCAGATGATTTGTTCTCGTCGAGTTGGGAGGAAATGGATTCATTTCAGTTCCCTAATGTCGAGGCTTTACTTCTTAACA TCTCTTCATCAAACTACGCATTGCCACGCTTCATTGATACAATGCAGAAACTCAAAGTTGTGATTATCATAAATCACGGT CCTGGTCCTGCAATATTGACCAACTTGTCGTGTCTCAGCTCGTTAAAGAAACTGAAACGGATCAGACTGGATAAAGTTTC AATCACTTTTCTGGACATTCTCCAGTTGCAGCTTGTCAGTCTGAAGAAGCTGTCTTTGTTCATGTGTTGTTTCGGCGAGG TTTCTCATGACAAAAATGAAATAGATGTCTCTAAAGCTCTATCAAGTTTACAAGAAATGGATCTAGACTACTGCTATGAT CTCGAGAAGTTACCTAACTGGATCTCTGAAGCTGTTTCGTTGGAGAAACTTAGCATCACAAACTGTAATAAGCTCTCTAT GCTTCCTAAAGCTATAGGCAACTTGAGTAAGTTGGAAGTGCTGAGGTTGTCTTCTTGTATTAGTCTCTCTGAGCTACCCG AAACAACTGCGAGACTCAACAACCTGCAGTTTCTGGATCTTTCTGATTGCTTAGGATTGAGAAAGTTGCCTCTAGAGATT GGGAGACTGGAGAAGCTGAAGAAGATCTCTATGAACAAGTGTTGGAAATGTGAACTGCCGGATTCAGTGAGGAATCTAGA GAATCTCGAGGTGAAATGCGATGAAGAAACTGCGGTGGTCCTGTGGAAATTGTTGAAGCTAAAAATGAGGAACTTGGATG TTCAAGTGGAGGAAACAGAGCACAACCTGAACTTGCTTCGACATTGTCACTAG |
| AA seq | Len:791 aa MNKATELVVDAGVGAVASEILKVVITEAKLVLAFKSVSKDLASTMEELVPIVREIEQTQGVEEVEELKTLKDTIDKARVV VEECKSVKKWEIHLKHYYTRRVYKINKKMLDFCQDRSYGCSPRVYTKLSSVPKIDDKVHVGLDWPLMKLKMKVLDDSLDR LLVSAFPGCGKTTLVTHLCHNQKIKDKFNHIFYSLVSGTPNFRKIVQNLLQHNGYEAVTFENDPQAANALIDLIEELTED GPVLLVLDDVWLGADDFLKYFRFKLPGYKILVTSRSDLPSFDYTYPLQPLNEKDAKALLLHVAPRPYNAPQAEYEELLQK ILKRCSGLPLVIEVVGVPLKGKPLYYWKGQVGSWSEGKTILRNPRPSVLECLEPSFTALEPHLKDCFMDMGSFLEDQKIR ASVIIDIWVELYGKGTPDSSFEYMKYLHDLASQNLLRLIPLGRNDHEDCFYNELLVTQHDILRELAIHESKSEAVLERKR LSLVIQGDDYPDLSLSKRESTRFLSVSADDLFSSSWEEMDSFQFPNVEALLLNISSSNYALPRFIDTMQKLKVVIIINHG PGPAILTNLSCLSSLKKLKRIRLDKVSITFLDILQLQLVSLKKLSLFMCCFGEVSHDKNEIDVSKALSSLQEMDLDYCYD LEKLPNWISEAVSLEKLSITNCNKLSMLPKAIGNLSKLEVLRLSSCISLSELPETTARLNNLQFLDLSDCLGLRKLPLEI GRLEKLKKISMNKCWKCELPDSVRNLENLEVKCDEETAVVLWKLLKLKMRNLDVQVEETEHNLNLLRHCH* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | TMV resistance protein N-like; K19613 leucine-rich repeat protein SHOC2 (A) |