Names & Information
Knowledge of BnaA08G0020200GG:
| Gene Name | BnaA08G0020200GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: putative disease resistance protein At1g50180 [Brassica rapa] |
| Best Hit (SwissProt) | Putative disease resistance protein At1g50180 OS=Arabidopsis thaliana GN=At1g50180 PE=3 SV=2 |
| NT seq | Len:2739 nt ATGAGTTCAATGGCAGCGACTCAATCTCACTTCTTCATCAACCTGAGAATCTCCTCCCAACGCAATCTCAGAGCAGATGC TCCTGTTTCATCTTCTTCTTGTGAGATGAATCGGCCATGGGCTTTGCCATGTTCCTTAAAAGTTGACAACGTTCAATCCC GACGAATAAAGAGAAGAGGATCTCCATGTTTGGCGAGGTTCGAGAATGGCGAGTTGCTCAGAAGTGGGATTGGTGATGCT GATGGGATTATAATCGTAGACCACGGTTCTCGTCGCCGAGAATCTAATATCATGCTTGAGGAGTTTGTGAAGATGTTCAA AGACAACACTGGCTACCCTATTGTGGAGCCTGCTCATATGGAATTGGCTGAGCCGTCTATAAAAAGTGCATTCAGTCTGT GTGTACAACAAGGAGCGAAACGTGTTGTTGTTAGCCCGTTTTTTCTGTTTCCTGGAAGACACTGGCATCAGGACATTCCT GCTTTGACGGCTGATGCTGCAAAGGAGTTCCCTTCCATCTCATACCTCATTACTGCACCTCTCGGCCTCCATAATCTCCT CATTGACGTGGTAAACGACAGAATCCAACATTGTCTGAGTCATGTTGAAGGTGATGCAGACGAATGTCTCGTTTGTGCTG GAACAAACAAGTGCAAGCTCTACAATAGTTCTGAGGCTCAAATCTATAAAGATGAGAACCAAAGGATACTTAGCTTGAGA GATGAACAGCTTGGAGAGGAGTTGCATCGGTTCTTGAAAAGGACTAAATGTCTCGTTGTGCTTGATGATATATGGGGCAC TGATGCTTGGGATGGTCTGAAACATGTCTTTCCACATGAAACAGGAAGCAACATAGTACTCACCACAAGGAACAAAGAGG TTGCTTTGTACGCTGATCCGAGAGGTGTACTCCATGAGCCGAGATTGCTAACACATGAAGAGAGTTGGGAGCTGTTGGAG AAAATTTCATTACAGGGACGAGATAATTTAGAGCCAATGTTGGTCAAGAAACTGGAGGAGATTGGGAAACAGATGGCCAT AAAGTGTGGAGGTTTACCTCTAGCTATAACGGTTCTAGGAGGACTTTTGGCGATGAAAAACACATTGAACCAATGGCAGA GAGTGCAAGAGAACATCACACCATATGTTTCAAATGGAGGAAGTAGCAATGGAAGTAAGAGTATGATGGTTGCAGATGTG TTGTCCTTGAGTTATGAGGACTTGCCTGCCCATTTGAAGCAGTGTTTCCTATACTTTGCTCACTATCCTGAAGATTTTGA GGTTCATGTGGGAACATTGGTTAGTTACTGGATCGCAGAGGGAATGGTTATGCCTGTAAAACACACGGAAGAATCTGGGA TGACAGTAGAGGATATAGGGCAAGATTACCTTGAAGAGTTGGTAAAGAGAAGCATTGTGATGGTTGGGAAAAGAGACATT GTAACCTCGGAAGTGATGACATGCCGTATGCATGATCTAATGAGGGAGGTGTGTTTACAGAAAGCTGAACAAGAAAGCTT TGTGCAAGTTGTTGATTCAAGGCAACAAGAAGAAGATGAAGCTTTACGGTCTCTTTTGACCAATACATCTCGCAGAATCT CTGTACAAATACATGGTGGTGCGGAGGAACACCGGATCGAGAGACTTTACATGAGTTCTCAGTGTAGATCTCTTGTGTAT TTGATGAAAAATCAAGGAAGTCAATGGACACTTCTTGGTAAGGTCTCCTTCAGAAAGATGAAACTCCTTAGAGTTTTAGA TCTTGAGGGAGCTCAGATCAAAGGAGGGAAGTTGCCAGATGATGTAGGAGATCTCATCCATTTGAGAAACTTTAGTTTGA GGTTGACAAATGTGAAGGAACTAACATCATGTATTGGAAACTTAACGTTGATGATCACTCTAGACTTGTTCGTGAAAGGG AGACTGTATATTCCAGATGTGATATGGAAGCTAAAGCGGCTGAGACATCTGTGCATGCCTTCAGAGCTTGATCCAAGAAC GAAGCTGGACTTGAGTACTCTAAGAAACCTGCAACAGCTCTGGGACTTCCCTGTTGGTCAATGCAATCCAAGGGATCTTT TAGCAATGACGAGTCTCAGAAGATTGTCCATCAATCTTTCTTCTCAGAACACAGACTTTGAGGTTGTGTCTTCTTTGAGT AGAGTCTTGAAACGTCTCCGTGGCTTGACGATTAACGTTCCCTGCGAACCTATGCCTCCACCAGTTGATATAACACAGCT GGTTTCTGCTTTTACTAATCTCTCTGAGCTGGAACTCTTCCTTAAACTAGAAAAGCTCCCTGGGGAACAGAGTTTCTCCT CTGATCTCGGTGCCTTGCGGTTGTGGCAATGCGGGTTAGTGGATGACCCGTTTTTGGTTCTTGAGAAGCTTCCGAACTTA AAGATTCTTCAGCTGTTTGAAGGATCATTTGTTGGTAGTGAACTTCATTGTTCTGTAAATGGTTTCCCTCAGCTGCATTC TTTGACATTGTCACAGCTTGAGAATCTAGAAGAGTGGACTGTAGAAGACGGTGCCATGATCCGTCTTGTTTCTTTGGAAC TGAAGTGTTGTAAGAAATTGAAGTCGGTTCCTGAAGGAACGAGGTTCTTGAAGAATCTACAAGAAGTGGAGATTGGGAAC ATGACAAAAGCATTCAAAGACAAGCTGGCGTCTGGTGGTGAAGACTTTTACAAGATTCAACATGTGCCTTGTGTTGTTTT TGAGTATTGTGACCTTTAA |
| AA seq | Len:913 aa MSSMAATQSHFFINLRISSQRNLRADAPVSSSSCEMNRPWALPCSLKVDNVQSRRIKRRGSPCLARFENGELLRSGIGDA DGIIIVDHGSRRRESNIMLEEFVKMFKDNTGYPIVEPAHMELAEPSIKSAFSLCVQQGAKRVVVSPFFLFPGRHWHQDIP ALTADAAKEFPSISYLITAPLGLHNLLIDVVNDRIQHCLSHVEGDADECLVCAGTNKCKLYNSSEAQIYKDENQRILSLR DEQLGEELHRFLKRTKCLVVLDDIWGTDAWDGLKHVFPHETGSNIVLTTRNKEVALYADPRGVLHEPRLLTHEESWELLE KISLQGRDNLEPMLVKKLEEIGKQMAIKCGGLPLAITVLGGLLAMKNTLNQWQRVQENITPYVSNGGSSNGSKSMMVADV LSLSYEDLPAHLKQCFLYFAHYPEDFEVHVGTLVSYWIAEGMVMPVKHTEESGMTVEDIGQDYLEELVKRSIVMVGKRDI VTSEVMTCRMHDLMREVCLQKAEQESFVQVVDSRQQEEDEALRSLLTNTSRRISVQIHGGAEEHRIERLYMSSQCRSLVY LMKNQGSQWTLLGKVSFRKMKLLRVLDLEGAQIKGGKLPDDVGDLIHLRNFSLRLTNVKELTSCIGNLTLMITLDLFVKG RLYIPDVIWKLKRLRHLCMPSELDPRTKLDLSTLRNLQQLWDFPVGQCNPRDLLAMTSLRRLSINLSSQNTDFEVVSSLS RVLKRLRGLTINVPCEPMPPPVDITQLVSAFTNLSELELFLKLEKLPGEQSFSSDLGALRLWQCGLVDDPFLVLEKLPNL KILQLFEGSFVGSELHCSVNGFPQLHSLTLSQLENLEEWTVEDGAMIRLVSLELKCCKKLKSVPEGTRFLKNLQEVEIGN MTKAFKDKLASGGEDFYKIQHVPCVVFEYCDL* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0006952 |
| Pfam | CbiX |
| KEGG | Disease resistance protein RPH8A, putative; K13457 disease resistance protein RPM1 (A) |