Names & Information
Knowledge of BnaA08G0027100ZS:
| Gene Name | BnaA08G0027100ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: putative disease resistance protein At1g50180 [Brassica rapa] |
| Best Hit (SwissProt) | Putative disease resistance protein At1g50180 OS=Arabidopsis thaliana GN=At1g50180 PE=3 SV=2 |
| NT seq | Len:2778 nt ATGGCAGAAGCTATTGTTTCCGTGACAGTGCAGAAGCTAGGGGAGTTTCTCCTTGAAGAACCTTTGTTCTTGTTTGGTAT AGGCGACCAGGTGAAGCAGCTGCAAGACGAACTGAAGCGTTTGAGGTGCTTCTTGAAAGATGCAGATGAGAAGCAGCGTA AAAGCGAGAGAGTGCGGAATTGGATTGCAGAGATTAGAGAAGCTGCTTATGATGCAGAAGATCTCCTCGAAGCATTTTTC CTCAAGGCGGAATCAAAGAAAGGAAAAGGGATCAAAAAGGTGTTTAGGAGGCTTTCTTGCATCATGAGCGAGGCAGTTTC GCTTCATAGTGTTGGCTCAGAGATTAGAGAGATCACCACCAGGCTTACCAAGATAGCAGCGAGCATGAAAGACTATGGTA TAAAAGAAGCTATGGACGGAGAAAGTTTGAGTTTGTTTGATAGTTTAAGAGAGCAGAGGCAGTCCTTTCCATATGCCGTT GAGCACAATCTTGTTGGGTTAGAGCAGAGTCTTGAGAAGTTAGTGAATGATTTAGTTTCCGGCGGTGAGAAACTAAGGGT CATGTCCATCTATGGAATGGGTGGTTTAGGGAAGACAACTCTCGCCAGACAGGTTTTCCATCATAGTATAGTGAGGCGTC ATTTCGATAGGTTTGCATGGGTTTATGTTTCTCAAGAGTGTAGACGGAGGCACGTTTGGCAAGAGATTCTTTTGAACCTT AGCTATAAAGATGAGAACCAAAGGATACTTAGCTTGAGAGATGAACAGCTTGGAGAGGAGTTGCATCGGTTCTTGAAAAG GACTAAATGTCTCGTTGTGCTTGATGATATATGGGGCACTGATGCTTGGGATGGTCTGAAACATGTCTTTCCACATGAAA CAGGAAGCAACATAGTACTCACCACAAGGAACAAAGAGGTTGCTTTGTACGCTGATCCGAGAGGTGTACTCCATGAGCCG AGATTGCTAACACATGAAGAGAGTTGGGAGCTGTTGGAGAAAATTTCATTACAGGGACGAGATAATTTAGAGCCAATGTT GGTCAAGAAACTGGAGGAGATTGGGAAACAGATGGCCATAAAGTGTGGAGGTTTACCTCTAGCTATAACGGTTCTAGGAG GACTTTTGGCGATGAAAAACACATTGAACCAATGGCAGAGAGTGCAAGAGAACATCACACCATATGTTTCAAATGGAGGA AGTAGCAATGGAAGTAAGAGTATGATGGTTGCAGATGTGTTGTCCTTGAGTTATGAGGACTTGCCTGCCCATTTGAAGCA GTGTTTCCTATACTTTGCTCACTATCCTGAAGATTTTGAGGTTCATGTGGGAACATTGGTTAGTTACTGGATCGCAGAGG GAATGGTTATGCCTGTAAAACACACGGAAGAATCTGGGATGACAGTAGAGGATATAGGGCAAGATTACCTTGAAGAGTTG GTAAAGAGAAGCATTGTGATGGTTGGGAAAAGAGACATTGTAACCTCGGAAGTGATGACATGCCGTATGCATGATCTAAT GAGGGAGGTGTGTTTACAGAAAGCTGAACAAGAAAGCTTTGTGCAAGTTGTTGATTCAAGGCAACAAGAAGAAGATGAAG CTTTACGGTCTCTTTTGACCAATACATCTCGCAGAATCTCTGTACAAATACATGGTGGTGCGGAGGAACACCGGATCGAG AGACTTTACATGAGTTCTCAGTGTAGATCTCTTGTGTATTTGATGAAAAATCAAGGAAGTCAATGGACACTTCTTGGTAA GGTCTCCTTCAGAAAGATGAAACTCCTTAGAGTTTTAGATCTTGAGGGAGCTCAGATCAAAGGAGGGAAGTTGCCAGATG ATGTAGGAGATCTCATCCATTTGAGAAACTTTAGTTTGAGGTTGACAAATGTGAAGGAACTAACATCATGTATTGGAAAC TTAACGTTGATGATCACTCTAGACTTGTTCGTGAAAGGGAGACTGTATATTCCAGATGTGATATGGAAGCTAAAGCGGCT GAGACATCTGTGCATGCCTTCAGAGCTTGATCCAAGAACGAAGCTGGACTTGAGTACTCTAAGAAACCTGCAACAGCTCT GGGACTTCCCTGTTGGTCAATGCAATCCAAGGGATCTTTTAGCAATGACGAGTCTCAGAAGATTGTCCATCAATCTTTCT TCTCAGAACACAGACTTTGAGGTTGTGTCTTCTTTGAGTAGAGTCTTGAAACGTCTCCGTGGCTTGACGATTAACGTTCC CTGCGAACCTATGCCTCCACCAGTTGATATAACACAGCTGGTTTCTGCTTTTACTAATCTCTCTGAGCTGGAACTCTTCC TTAAACTAGAAAAGCTCCCTGGGGAACAGAGTTTCTCCTCTGATCTCGGTGCCTTGCGGTTGTGGCAATGCGGGTTAGTG GATGACCCGTTTTTGGTTCTTGAGAAGCTTCCGAACTTAAAGATTCTTCAGCTGTTTGAAGGATCATTTGTTGGTAGTGA ACTTCATTGTTCTGTAAATGGTTTCCCTCAGCTGCATTCTTTGACATTGTCACAGCTTGAGAATCTAGAAGAGTGGACTG TAGAAGACGGTGCCATGATCCGTCTTGTTTCTTTGGAACTGAAGTGTTGTAAGAAATTGAAGTCGGTTCCTGAAGGAACG AGGTTCTTGAAGAATCTACAAGAAGTGGAGATTGGGAACATGACAAAAGCATTCAAAGACAAGCTGGCGTCTGGTGGTGA AGACTTTTACAAGATTCAACATGTGCCTTGTGTTGTTTTTGAGTATTGTGACCTTTAA |
| AA seq | Len:926 aa MAEAIVSVTVQKLGEFLLEEPLFLFGIGDQVKQLQDELKRLRCFLKDADEKQRKSERVRNWIAEIREAAYDAEDLLEAFF LKAESKKGKGIKKVFRRLSCIMSEAVSLHSVGSEIREITTRLTKIAASMKDYGIKEAMDGESLSLFDSLREQRQSFPYAV EHNLVGLEQSLEKLVNDLVSGGEKLRVMSIYGMGGLGKTTLARQVFHHSIVRRHFDRFAWVYVSQECRRRHVWQEILLNL SYKDENQRILSLRDEQLGEELHRFLKRTKCLVVLDDIWGTDAWDGLKHVFPHETGSNIVLTTRNKEVALYADPRGVLHEP RLLTHEESWELLEKISLQGRDNLEPMLVKKLEEIGKQMAIKCGGLPLAITVLGGLLAMKNTLNQWQRVQENITPYVSNGG SSNGSKSMMVADVLSLSYEDLPAHLKQCFLYFAHYPEDFEVHVGTLVSYWIAEGMVMPVKHTEESGMTVEDIGQDYLEEL VKRSIVMVGKRDIVTSEVMTCRMHDLMREVCLQKAEQESFVQVVDSRQQEEDEALRSLLTNTSRRISVQIHGGAEEHRIE RLYMSSQCRSLVYLMKNQGSQWTLLGKVSFRKMKLLRVLDLEGAQIKGGKLPDDVGDLIHLRNFSLRLTNVKELTSCIGN LTLMITLDLFVKGRLYIPDVIWKLKRLRHLCMPSELDPRTKLDLSTLRNLQQLWDFPVGQCNPRDLLAMTSLRRLSINLS SQNTDFEVVSSLSRVLKRLRGLTINVPCEPMPPPVDITQLVSAFTNLSELELFLKLEKLPGEQSFSSDLGALRLWQCGLV DDPFLVLEKLPNLKILQLFEGSFVGSELHCSVNGFPQLHSLTLSQLENLEEWTVEDGAMIRLVSLELKCCKKLKSVPEGT RFLKNLQEVEIGNMTKAFKDKLASGGEDFYKIQHVPCVVFEYCDL* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0006952 |
| Pfam | NB-ARC domain |
| KEGG | POPTRDRAFT_554585; disease resistance family protein; K13457 disease resistance protein RPM1 (A) |