Names & Information
Knowledge of BnaA08G0107100GG:
| Gene Name | BnaA08G0107100GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC01g11870D [Brassica napus] |
| Best Hit (SwissProt) | Probable WRKY transcription factor 19 OS=Arabidopsis thaliana GN=WRKY19 PE=2 SV=1 |
| NT seq | Len:3009 nt ATGGCGAGCGATTCCGTAAGGCCGGGCTCATTCTTCCGGTTGAATAAGTGGATCATTAGTTCGGCTAAGGCACTCAAATC CGGTGATCAGACAAAGAGCTCCGACTACTGCTGGGAGAAGAACCAGAATGAAGTTGTTATCCGAATTGATCTAACTTCTG ATAGGATGAAAAATAAGGCCATGAGTATAATGACTCGGTGTTCAGGAGTCTATTCCGTAGAGTTAGACATGGAGAACCGG AGGATGACCTTGATTACGGATCAGAGCGTGGATGTCGTTGAGATAATAAGAAAGCTGAGAAGGCTCTGCCAAGCCGACTT AGTTTCGGTTCTTCACAGGAAGAAAGTCGAGCCAGAGAAGGAAAGAGCCGACAAGCAACCAACGAAAGAAGATCAAAACA TGGTTTTTGAAGCTAAGCTTTCAGGAGGAGAAGCCTTGAGTGTTGGCCCAGTTTCAAGAACCGTTAGTACATCCGGTGCA GACAATTGCATCACTACAGCTGTCAACAAAAGGACCCAGGGAGATGACTGGTACTCCTTCTGTGAGTTCCTCAAGAACCG CTTGCGTCCATTGACTCTCTCTGGGTGCAGAGCCAAAGACGCCATTGATTTTCTCCGCATGGGGAAGACTTCCACTGACT CCAATGTCCTCGTTCGCCGCCTCAGGGCTGGATGTGAGGCATACGGCATAAAACCAAAGGACAACCCTTTTCGCAGCCTG GCTGTAATAACATACCTAAAGGAGGCGAGGGAGGCGACTCGAGAAACTGAATGCATTTTGTTTGTTTCGAGTAACGGCAT CCTTGATGTGGAGGAAACGTCTTTCAACGAAGCTATCTTAACAGAGTTGTACGAGCGAGATGTCACTCCTTTGACATATA ATCTATCAGGGAGAGGGAACCTGGACGCGGATATGCTTTACAGATCTAGTGTTGCTATAATTGTACTTTCAAATTCTGCT CGTAGTAGTCAGTCCTTGGATCAGCTGGTGGCAGTTATGGATCATTGGAAAGAAAAAGACCTTGTAATTATTCCTGTGTA TTTTAAGGTAACACTTTCAGACATTTTTGGGCTGGAAGGTCAGTTTGAAGCAGGTAGAGTTCAGAAATGGAAGTTAGCTA TGACTGAAATGGCGTCCATCGATGGACATCAATGGTCCAAGGGGGCTCAGTTTATGCTTGCCAAGAAAATTGTAAGGAAT ACATGCTTAAGGCTAGATCTGAAAAATAGCAAGAATCTGGTCAGAATCTTAGAACGGTTAAATCATCCCCAGCCTCCAGA TGCGGAATTTGAGGGAATCTGGGGCATGGCAGGAATAGGTAAGACATCCATTGCTAGGGAAGTTTTTGAAATACTAGCTC CACAATATGATTTCTGTTACTTTCTGGAAGACTTTCATCTAATGTGTCAGAGCAAAGGGCTCAGGCAAATACGTGATGAT TTCTTCTCCAAAGTATTTAGGGAAGAAAAACTAAGTATAGGCGCTTCTGATGCAAAACCGAGTTTCATGAGGGACTGTTT CCAAAATAAAGCTATTCTCGTTGTTCTCGATGGCGTGAGTAATGCCAGTGATGCAGAATATGTTGTTGGAGGGTTTGGCT GGTTTTCTCATGGACACAGAATTATCTTAACCTCTAGGAGACGACAAGTTCTTCTACAATGCAAGGTAAAAGAACCATAT GATATCCAAAAATTATGGGCGTTTGAGTCCTTTCGTCTATGCAAGCAATATATAAAAGAAGAAAGTGAGGTCATCTCAGA GCTTATGAGCTGCAGTAGTGGTATACCACTGGCTCTCAAAGTTTTGGCTTCTTCTGTATCAAAGCAGCATATAAACAATA TGAACGAACATCTCCAAAGCTTGCGGAATAATCCTCCAACCAAGATTCAAAAAGCATTCCAGAGAAGCTTTGATGGCCTA GATGAAAACGAAAGAAACATATTTTTGGACCTTGCGTGTTTTTTCAGAGGGGAGAACAAAGATCATGTGGTGCAATTACT TGATGCTTGCGGGTTTCTTACGTATTTGGGCATTTGTGATCTCATTGACGAGTCTCTCATTAGCCTTATGGACAATAGGA TAGAGATTCCTCTTCCTTTTCAAGACATGGGTAGATTTATTGTTCATGAAGAAGATGAGGATCCATGTGAACGTAGCAGA TTATGGGACTCAGTTGACATTGTCGATGTCTTGACAAACAGTTCAGGAACAGAAGCAATTGAGGGCATCTTCCTGGATGC ATCTGACTTGACCTGTGAGTTGAGTCCTACTGTGTTTGATAATATGTATAGACTTAGACTGCTGAAGTTCTGTTCTTCCA CCTCTGAGAATGAGGGCAAGCTAAATCTACCTGAAGGTTTAAACAGTTTGCCTAATGAGCTAAGGCTACTTCACTGGGAA AATTACCCTCTGGAATGCTTGCCTTGCAAATTCAATCCTGAGAACCTCTTAGAGGTAAACATGCCACATAGCAACATGAA GAAGTTATGGGCAGGAAAGAAAAATCTCGAGCAGCTAAAGAAAATCAAGCTGAGTCACTCCAGCAACTTAACTGATATTC TGATGCTATCAGATGCCGTGAACCTTGAACATATTGATCTGGAAGGATGTACGAGTCTGGTTGACATTAGCACATCCATT CCTCGTTGTGGGAAGCTTGTTTCTTTAAATATGAAAGACTGCTGTCATTTGCGAACTTTGCCTTCCATGGTTCATTTGAC GTCTCTCAAGATTCTTAATTTGTCTGGCTGCCTCCAGCTGGAGGAGATTCAGGATTTTGCATCAAACTTGAAAGAGGTAT ATCTAGCTGGGACTCCCATAAGAGAGCTTCCATTGTCAATCGTGAATATCACTGAACTTGTTACGCTAGACCTAGAGAAC TGCAGAAGGCTTCAGAAACTGCCATTCGGGATAAGGAACTCGAGGTCTATTGTTGAGCTTAAGCTCTCTGGTTGCACAAG CCTCGTGAACCTTCCAAACCTCGAGGCCTTAGATTGTGGACCATCTTAA |
| AA seq | Len:1003 aa MASDSVRPGSFFRLNKWIISSAKALKSGDQTKSSDYCWEKNQNEVVIRIDLTSDRMKNKAMSIMTRCSGVYSVELDMENR RMTLITDQSVDVVEIIRKLRRLCQADLVSVLHRKKVEPEKERADKQPTKEDQNMVFEAKLSGGEALSVGPVSRTVSTSGA DNCITTAVNKRTQGDDWYSFCEFLKNRLRPLTLSGCRAKDAIDFLRMGKTSTDSNVLVRRLRAGCEAYGIKPKDNPFRSL AVITYLKEAREATRETECILFVSSNGILDVEETSFNEAILTELYERDVTPLTYNLSGRGNLDADMLYRSSVAIIVLSNSA RSSQSLDQLVAVMDHWKEKDLVIIPVYFKVTLSDIFGLEGQFEAGRVQKWKLAMTEMASIDGHQWSKGAQFMLAKKIVRN TCLRLDLKNSKNLVRILERLNHPQPPDAEFEGIWGMAGIGKTSIAREVFEILAPQYDFCYFLEDFHLMCQSKGLRQIRDD FFSKVFREEKLSIGASDAKPSFMRDCFQNKAILVVLDGVSNASDAEYVVGGFGWFSHGHRIILTSRRRQVLLQCKVKEPY DIQKLWAFESFRLCKQYIKEESEVISELMSCSSGIPLALKVLASSVSKQHINNMNEHLQSLRNNPPTKIQKAFQRSFDGL DENERNIFLDLACFFRGENKDHVVQLLDACGFLTYLGICDLIDESLISLMDNRIEIPLPFQDMGRFIVHEEDEDPCERSR LWDSVDIVDVLTNSSGTEAIEGIFLDASDLTCELSPTVFDNMYRLRLLKFCSSTSENEGKLNLPEGLNSLPNELRLLHWE NYPLECLPCKFNPENLLEVNMPHSNMKKLWAGKKNLEQLKKIKLSHSSNLTDILMLSDAVNLEHIDLEGCTSLVDISTSI PRCGKLVSLNMKDCCHLRTLPSMVHLTSLKILNLSGCLQLEEIQDFASNLKEVYLAGTPIRELPLSIVNITELVTLDLEN CRRLQKLPFGIRNSRSIVELKLSGCTSLVNLPNLEALDCGPS* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Heavy-metal-associated domain |
| KEGG | hypothetical protein; K16225 probable WRKY transcription factor 52 (A) |