Names & Information
Knowledge of BnaA08G0107200GG:
| Gene Name | BnaA08G0107200GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like [Camelina sativa] |
| Best Hit (SwissProt) | Disease resistance-like protein CSA1 OS=Arabidopsis thaliana GN=CSA1 PE=3 SV=1 |
| NT seq | Len:3594 nt ATGGCTTTTCCCTCTTCTTCTTCTTTTTCTTCTTCTTCATCCAAGCGCCAGTTTGACGTGTTTGTGAGTTTCAGAGGGGC TGACACGCGCAATACCTTCACCTCTCACCTCCTCAAGTCCCTACGTGGGAAAGGTATCGACGCTTTCTCTGATGGGAAAC TCCTGAGAGGTGTTGACCTCTCGGTTCTATTTGATAGGATCGAGCAATCAAAGATGTCGATCGTTGTCTTCTCAGAGAAA TACGCCAACTCCACCTGGTGCTTGGAGGAACTCTGGAAGATCATGCAGTGCAGGAAGAAATCTGGGCATGGGGTTATACC CATCTTCTACAAGGTCAAGAAATCTGATGTGGAAACTCAGAAAGGGAGTTTCGGAGCTCCATTTCAAAGCCCTAAAGAGA GTTTCAAGGGAGATGGCCACAAGATTGAGGAATGGAAGGAAGCTCTGAGGACTGCTTCCAATGTTCTTGGCTTTGTATAT CCTGAGGACAGACCGGAGACTGACTTTCTCGATGACATCGCCAAGGATACCCTCAGGATGCTCAATGATTTGTCTCCATG TGAAACCAGTGGTTTACCGGGAATTGAATCACGTTCCAAGGAACTGGAGAAGTTACTCATGTTTGGTAATGATGAATGTG TCCGTACCATCGGAGTTCTTGGGATGACTGGAATCGGCAAGACACTGGTTGCTGATATCGTCTATAAGCGAAATTGCAGG CAATTTGATGGTTACGATTTCGTTGATGACGTTGACAGGGAGTTGGAATTGCAACAGTTGCCTCACCTACGGGAGAAGCT CCTCTGTAAAGTATTGGATGTTGCAAGCTTGGATGATAGAGCGCACGGAAGATCGGAGAATTATCTTCGGAACAAGAAGT TGTTTATTGTTCTGGATAACGTGACTGATAAAGAACAGATAGATGTTCTCATCGGAAAGAAAGCAGTGTACCGTAAAGGA ACCAGGATTGTCATAATAACCAGAGACAAGAAGCTGTTGGAGAACAAAGTTGATGCAACATATGTAGTCCCCAGACTAAA TGACAGAGAAGCTAGGAAGCTTTTCTGTCTTAGTGCATTCCCTGGCAACCTTTACCCGCCGGAAGAATTTTTGGATCTGT CTGAAAAATTTGTATATTATGCTAAGGGTCATCCATCAGCTTTGAAGTGTTTAGGTTCGGGTCTAATTCAAAAAGATAAA TCATACTGGATGAAGAAATGGGAGGGTTTAAAGGTAAGGCCAGACAAGGAGATTCAGAGAGTGCTAGAAAAGAGTTATAA AACACTGGATGATCAACAGAAGAGAATGTTTCTGGACATAGCATGCTTTTTCAAATCAGAAAAAGCAGATTTCGTTACAA GCATCCTGAAATCAGACAAGTTCAATGCTGCAGATGTGATGCAAGAGCTTGTAGATAAATGCTTGTTAACTATTTCATAT AATAGGCTTGAGATGCATGATCTACTGCATATAATGGGAAAGGATATCGGATGTGAATCATCCATCAAAAAGGTCGGCAA ACGTAGTCGGCTGTGGGAACACAAAGATATTCGTCATATCCTGGAGCGGAACAAGGGTACTGAATATGTTAGAGGCATCT TCTTGAACATGTCTGATGTCGAAAGGATCAAGCTTAGTCCTGCTGCTTTCATGGAGATGTCAAATCTTAAATTCCTGAAA TTCCACAATTCTCATTGTTCTCAGTGGTGTGAAATTGACCATAAATTTCAGTTCTGCGAAGGGCTCGATCAGTTTCCAGA TGAGCTTGTGTATCTTCACTGGCAGGGGTACCCTTACAATCACCTTCCATCAGACTTCAATCCGGAGCAACTTGTGAACT TAAATCTGCGTTATAGCCGCATCCAAAAACTGTGGAAAGAGGAACAGAATACAAAAAATCTAAGATGGATTGACCTCAGT CAGTCAAAATACTTCCTGAACTTATCAGGTTTATCTAAGGCCAAAAATCTTGAAAGACTGGATCTCGAAGGATGCAATAG TTTGGATACATTGGGCCCATCAATCGAACAGATGAACAAGCTTATTTACCTGAACCTCCGAGACTGCACTAGCCTCAAGA GTCTCCCGGAGGGAGTCAACTTAGAATCTCTGAAGACTCTGATCCTCAGTGGCTGCTCAAACCTTCAGCACTTTCGTATC ATATCAGAGAGTATCGAATCCCTTTTTTTGGAAGGCTCAGCAATCGAACAAGTCGTTGAACACATCCAGAGTCTTCGGAG TCTCATTTTACTGAATCTCAAGAATTGTCGCAGGTTGAGGTGTCTTCCAAACGATCTTTACAAGCTGAAATCTCTTCAAG AACTGATTCTCTCTGGCTGTTCAGCGCTGGAGAGTCTTCCACCCATCAAAGAGGAAATGGAATGCTTAGAGATCTTGCTT ATGGATGGAACGTCCATCAAACAGACACCTGAAACCATTTGTTTGAGTAACCTCAAGATTTTTTCGTTCTGTGAATCTAG CATCGAGGATTCCACAGGGTTGGTATTGCTGCCTTTCTCTGGCAGTTCTCGTCTATCGGACCTCTATCTCGCGAGTTGCA ATATCAACAAATTGCCGAACAACTTCAGCTCCTTACACTCGTTGCGGTGTTTATGCTTAAGCAGAAACGATATTGAGACT CTACCTGAAAGCATCGAGAAACTTTATTCTCTGTTGTTGCTTGACTTGAAGCATTGCCGCAGGCTCAATTCTCTCCCGGT GCTTCCATCTAATCTACAGTACTTAGATGCTCATGGGTGCGTTTCCTTGGAAAAAGTTGCAAAACCAGTGGCAGTTCCCC TGGTAACTGAGAGGATGCATACTACTTTCATTTTCACGGATTGCTTCAAACTGAACCAAGCTGAGCAGGAAGCTATTGTA TCTCAGGCCCAACTCAAGAGTCAGCTAGTGGCAAGTACATCTATTCAACAAAATCATAAGGGACTAGTTACGGATCCTCT GGTTGCCGTATGCTTTCCAGGAAATGACATACCTTCATGGTTATGCGATCAGAGAATGGGATCTTCCATAGAAACCGACC TGGTTTCACACTGGTGTAACAGTAAATTTATTGGAGTTTCCCTAAGTGTTGTTGTCAGCTTCGAGGGTCATGAAGATTGT CATGTCAACCGTTTATCTGTAAGATGCAAATGCAACTTCAAAAATCATAACAATCAGTCTATCAGCTTTAGTTTCTGTCT TGGGGGATGGAATGAGTCATGTGGATCATCTTGCCATGAACCACGGAAACTTGGATCTGACCATGTGTTTGTTAGTTATA ACAACTGTAATGTGCCAGTTTTCCAATGGAGTGAAGAGAGTAATGACGGTAATAGATGTCGTCCCACTAGTGCCTCATTT GAATTCTACCTTACTGATGGCACTGAAAGGAAACTAGAAAGCTGCAAGGTGACAAGGTGTGGGATGAGTTTGCTATATGC TCCTGATGAGAATGACCGTGGATTCCAGGGAACACGGGTTACAGATATATTTGAGAGTTCAACAAGTGAAGCTTTTGTTC CCATAAGAGGTTGGTCACACTCACAAGTTGGAGAAAGAAGGAATGGTATAATAAGAGATGAAATCCCCTTATGA |
| AA seq | Len:1198 aa MAFPSSSSFSSSSSKRQFDVFVSFRGADTRNTFTSHLLKSLRGKGIDAFSDGKLLRGVDLSVLFDRIEQSKMSIVVFSEK YANSTWCLEELWKIMQCRKKSGHGVIPIFYKVKKSDVETQKGSFGAPFQSPKESFKGDGHKIEEWKEALRTASNVLGFVY PEDRPETDFLDDIAKDTLRMLNDLSPCETSGLPGIESRSKELEKLLMFGNDECVRTIGVLGMTGIGKTLVADIVYKRNCR QFDGYDFVDDVDRELELQQLPHLREKLLCKVLDVASLDDRAHGRSENYLRNKKLFIVLDNVTDKEQIDVLIGKKAVYRKG TRIVIITRDKKLLENKVDATYVVPRLNDREARKLFCLSAFPGNLYPPEEFLDLSEKFVYYAKGHPSALKCLGSGLIQKDK SYWMKKWEGLKVRPDKEIQRVLEKSYKTLDDQQKRMFLDIACFFKSEKADFVTSILKSDKFNAADVMQELVDKCLLTISY NRLEMHDLLHIMGKDIGCESSIKKVGKRSRLWEHKDIRHILERNKGTEYVRGIFLNMSDVERIKLSPAAFMEMSNLKFLK FHNSHCSQWCEIDHKFQFCEGLDQFPDELVYLHWQGYPYNHLPSDFNPEQLVNLNLRYSRIQKLWKEEQNTKNLRWIDLS QSKYFLNLSGLSKAKNLERLDLEGCNSLDTLGPSIEQMNKLIYLNLRDCTSLKSLPEGVNLESLKTLILSGCSNLQHFRI ISESIESLFLEGSAIEQVVEHIQSLRSLILLNLKNCRRLRCLPNDLYKLKSLQELILSGCSALESLPPIKEEMECLEILL MDGTSIKQTPETICLSNLKIFSFCESSIEDSTGLVLLPFSGSSRLSDLYLASCNINKLPNNFSSLHSLRCLCLSRNDIET LPESIEKLYSLLLLDLKHCRRLNSLPVLPSNLQYLDAHGCVSLEKVAKPVAVPLVTERMHTTFIFTDCFKLNQAEQEAIV SQAQLKSQLVASTSIQQNHKGLVTDPLVAVCFPGNDIPSWLCDQRMGSSIETDLVSHWCNSKFIGVSLSVVVSFEGHEDC HVNRLSVRCKCNFKNHNNQSISFSFCLGGWNESCGSSCHEPRKLGSDHVFVSYNNCNVPVFQWSEESNDGNRCRPTSASF EFYLTDGTERKLESCKVTRCGMSLLYAPDENDRGFQGTRVTDIFESSTSEAFVPIRGWSHSQVGERRNGIIRDEIPL* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | hypothetical protein; K16226 disease resistance protein RPS4 (A) |