Names & Information
Knowledge of BnaA08G0114900ZS:
| Gene Name | BnaA08G0114900ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaA08g09220D [Brassica napus] |
| Best Hit (SwissProt) | Inactive disease resistance protein RPS4 OS=Arabidopsis thaliana GN=RPS4 PE=3 SV=1 |
| NT seq | Len:3600 nt ATGGCTCATCCTTCTTCCTCCTCGTCTTTGGATCAAACTAAGCGCCAGTTTGACGTGTTTGTGAGTTTCAGAGGCAAGGA TACTCGTAATACCTTCACCTCTTACCTTCTTCAGTCCCTACACCGGAAAGGTATTGATGCTTTCTTTGATGGGAAACTCC GGCGAGGCAAGGACATATCAGTTCTCTTTGACAGGATTGAGCAATCAAAGATGTCGATCATTGTCTTCTCAGAGAACTAT GCTAACTCCACCTGGTGCTTGGAGGAACTCTGGAAGATAATGCAATGCAGAGAGAAGTCCGGTCATGTGGTTTTACCAAT CTTCTACAAGGTCAGGAAATCTGATGTGGAGAATCAGACAGGGAGTTTTCGAACTCCCTTCCAGAACCCAAAAGCGAGTT TCAAGGGACGTGAGCACAAAGTTGCGGCATGGAAGGAAGCTCTAAAGACTGCTTCCAATATCCTGGGCCATGTACTTCCT GAGGAACGACCAGAGTGTGAATTTGTTGAAAAAATAGCCACGGAAACTTTCAAGATACTGAATGATTTGTCTCCATGTGA AATCACTGGCTTCCCAGGGATTGAATCTCGTTCCAAAGATTTGGAGGAGTTATTGATGTTCGATAATGCAACCTGTACCC GTACCATTGGGGTCCTTGGCATGACTGGAATCGGCAAGACAACTGTTGCTGCTAGCGTTTACAAACGAAACTACCGTCGG TTTGATGGCTACTGTTTCGTTGAAGACATTGAGAATGAGTCGATAAGGCGTGGATTACCTCATTTGCGTCAGAAGCTCCT AAGTAAATTATTGGATGAAGAAAATGTGGACGTCAGAGCGCATGGGAGATTGAAAGAGTTCCTCAGGAACAAGAAGGTGT TTATTGTGCTGGATAATGTGACCGAAGAGAATCAAATCGAAGTTCTCATCGGACAGCAGGAACTGTACCGGAAAGGAAGC AGGATTGTTATAACAACCAGAGACAAGAAACTGCTTGAGAACAATGCTGATGCAACGTACGTAGTTCCCAGATTAAATGA CAGGGAAGCTATGGAGCTTTTCTGCCTCGAGGCATTTTCTGAAAACCTCCACTCTACGGAAGAGTTTATGGATCTAGCAG AGAACTTTGTGTATTACACTAAAGGACATCCGTTAGCTTTGAAGTTGTTAGGTTCAGGTCTACGCCACAAGGAAAAAACA TACTGGATGCAGAAATGGGAGAGGTTAAGGGTAGTGCCAGACAAGGAGATTCAGAAAGTGCTAAAAGTGAGTTATGACAC ATTAGATGATGAACAGAAGAGCATGTTTTTGGACATAGCATGCTTTTTCAGGTCGGAGAAAGCAGATTTCGTTTCGAGCA TCCTGAAGTCAGATCGTGTCGATGCTGCAGCTGTGATGAGGGATCTTGAAGACAAGTGTTTCTTAACTGTTTCTTATAAT CGGCTTGAGATGCATGATCTACTGCATACAATGGCGAAGGAAATTGGATATGAAGCATCCGTCAAAAGGGAAGGAAAACG TACTAGGCTGTGGAACAACAAAGATATACGCCGTGTGCTGGAGCAGAGCACGGGAACTGGTTGTGTTAGAGGCATTTTCT TGAACATGTCTAATGTCGAAAGGATCAAGCTAAGTCCTGATGTGTTCATGAAGATGTCCAATCTCAAATTCCTGAAATTC CACTATTCTCATTGTTCCCAGTGGTGTGATAACAAGCATAAATTTCAGTTCTCTGAAGAGCTTGACCATATTCCGGACGA ACTTGTGTATCTTCATTGGCAGGGGTACCCTTACGAGTACCTGCCATCAGAATTTAATCCAGAGGAACTCGTTGATCTCA GTCTGCATCATAGCTACATCAAACAACTGTGGGAAGATGAGAAGGTGTCACAGAATACAGAAAAATTAAGATGGGTTGAC CTCAGTCAGTCACAAGGCTTGCTGAATCTATCAGGTTTGTCCAGGGCCAAAAATCTTGAAAGATTGGATCTCGAAGGCTG TAAGAGTTTGGTTTTGTTGGGCTCGTCAATCAAACAGATGAACAAACTAATTTACTTGAACCTCAGAGAGTGCACTAGCC TTGAGAGTCTTCCAGAGGGAATCAATTTGAAGTCTCTGAAGACTCTGATCCTCAGTGGCTGCTCAAACCTTCAGGAGTTT CAAATCATATCAGAAAATATTGAGTCCCTTTATTTAGACGGCTCAACCATAGAACGAGTTGTTGACCGCATCGAGAGTCT TCGCAACCTCATTTTGCTGAATCTCAGGAATTGTTGCAGGTTGAAGTGTCTTCCCAACGATCTTTACAAGCTGAAATCTC TTCAGGAACTGATCCTCTCTGGCTGCTCAGCTCTGGAGAGTCTTCCACCCATCAAAGAGGAGATGGGATGCTTAGAGATT TTGCTTATGGATGGAACTTCCATCAAACACACACCTGAAACTATTTTGTTGAGCAACCTGAAGGTGTTTTCGTTCTGCGG GTCTAGCATCGAAGATTCCACAGAGTTGGCGTTGTTGCCTTTCTCAGGCAACTCTTGCCTTTCGGACCTTTATCTCACGA ACTGCAATATCTACAAATTACCGGACAACTTTAGTTCCTTACACTCGTTGAGGTGTCTATGCTTAAGCAGAAACAACATT GAGACTCTACCTGAGAGCATCGAGAAACTTCATTGTCTGTTGTTTCTTGACTTGAAACATTGCCGCAGGCTCAATTCTCT CCCGGTGCTTCCATATAATCTGCAGTACTTAGATGCTCATGGGTGTGTTTCTCTGGAAAAAGTTACTAAACCAGTGACAG TTCCCCTAGTAACTGAGAGGATGCATACTACTTTCATTTTCACGGATTGCTTCAAACTGAACCGAGCTGAACAAGAAGCT ATCGTAGCTCAGGCCCAACTCAAGAGTCAGCTACTGGCAAGGACATCTCTTCAACATAATCATAAGGGACTAGTTCTGGA TCCTCTGGTTGCCGTTTGCTTCCCAGGAAGTGACGTACCCTCATGGTTCTGCCATCAGAGTATGGGATCTTCGATTGAAA CCGACCTCCTTCCTCACTGGTGCAACAATAAATTTATTGGAGCTTCCCTAGGTGTTGTTGTCACCTTCAAGGATCACGAA GGTCGTCATGCAAACCGTTTATCTGTAAGGTGCAAGTGCAGATTTCAAAATCGAAATGGCCAGTCAATCAGCTTTAGTTT CTGTCTTGGGGGATGGAACGAGTCATGTGGATCATCTTGCCATGAACCACGGAAACTTGGATCTGACCATGTGTTTATTA GCTATAACAACTGTAATGTGCCAGTCTTCCAATGGAATGAAGAGAGTAACGACGGTAATAGATGTCGTCCCACTAGTGCC TCATTTGAATTCTACCTTACTGATGGCACTGAAACGAAGCTAGAAAGGTGCAAGGTGACAAGGTGTGGGATGAGTTTGCT ATATGCTCCAGATGAGAACGACCGTGGGTTCCAGGGAACTCGAGTTACAGATACTGTTGAGCGTACATTGAGTGAAGCTT ATGTACCCGTTAGAGGTCGGTCACACTCACAAATTGGAGAAAGAAGGAATGGTAGAATGAGAGATGAAATCCCCTTATGA |
| AA seq | Len:1200 aa MAHPSSSSSLDQTKRQFDVFVSFRGKDTRNTFTSYLLQSLHRKGIDAFFDGKLRRGKDISVLFDRIEQSKMSIIVFSENY ANSTWCLEELWKIMQCREKSGHVVLPIFYKVRKSDVENQTGSFRTPFQNPKASFKGREHKVAAWKEALKTASNILGHVLP EERPECEFVEKIATETFKILNDLSPCEITGFPGIESRSKDLEELLMFDNATCTRTIGVLGMTGIGKTTVAASVYKRNYRR FDGYCFVEDIENESIRRGLPHLRQKLLSKLLDEENVDVRAHGRLKEFLRNKKVFIVLDNVTEENQIEVLIGQQELYRKGS RIVITTRDKKLLENNADATYVVPRLNDREAMELFCLEAFSENLHSTEEFMDLAENFVYYTKGHPLALKLLGSGLRHKEKT YWMQKWERLRVVPDKEIQKVLKVSYDTLDDEQKSMFLDIACFFRSEKADFVSSILKSDRVDAAAVMRDLEDKCFLTVSYN RLEMHDLLHTMAKEIGYEASVKREGKRTRLWNNKDIRRVLEQSTGTGCVRGIFLNMSNVERIKLSPDVFMKMSNLKFLKF HYSHCSQWCDNKHKFQFSEELDHIPDELVYLHWQGYPYEYLPSEFNPEELVDLSLHHSYIKQLWEDEKVSQNTEKLRWVD LSQSQGLLNLSGLSRAKNLERLDLEGCKSLVLLGSSIKQMNKLIYLNLRECTSLESLPEGINLKSLKTLILSGCSNLQEF QIISENIESLYLDGSTIERVVDRIESLRNLILLNLRNCCRLKCLPNDLYKLKSLQELILSGCSALESLPPIKEEMGCLEI LLMDGTSIKHTPETILLSNLKVFSFCGSSIEDSTELALLPFSGNSCLSDLYLTNCNIYKLPDNFSSLHSLRCLCLSRNNI ETLPESIEKLHCLLFLDLKHCRRLNSLPVLPYNLQYLDAHGCVSLEKVTKPVTVPLVTERMHTTFIFTDCFKLNRAEQEA IVAQAQLKSQLLARTSLQHNHKGLVLDPLVAVCFPGSDVPSWFCHQSMGSSIETDLLPHWCNNKFIGASLGVVVTFKDHE GRHANRLSVRCKCRFQNRNGQSISFSFCLGGWNESCGSSCHEPRKLGSDHVFISYNNCNVPVFQWNEESNDGNRCRPTSA SFEFYLTDGTETKLERCKVTRCGMSLLYAPDENDRGFQGTRVTDTVERTLSEAYVPVRGRSHSQIGERRNGRMRDEIPL* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine rich repeat |
| KEGG | RPS4; protein RESISTANT TO P. SYRINGAE 4; K16226 disease resistance protein RPS4 (A) |