Names & Information
Knowledge of BnaA08G0155600NO:
| Gene Name | BnaA08G0155600NO |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: putative disease resistance protein At4g11170 [Brassica rapa] |
| Best Hit (SwissProt) | Probable disease resistance protein RPP1 OS=Arabidopsis thaliana GN=RPP1 PE=2 SV=1 |
| NT seq | Len:2127 nt ATGTCTCAATTAACCAATGAGACATGTACCAGTATTTCACATTTGGGAGTCGTCAAAGACAGGTTGAAAGACAAGAAAGT TCTTGTTGTCCTTGATGATGTTGATCGGTTAGTACAACTAGAAGCCATGGCGAAAGAAAGTAGTTGGTTTGGTCCTGGGA GTCGGATTATCATCACAACCCAAGATCAAAAGGTTCTAAAAGCAAGTGGGATCAACCATATCCACAAGGTGTGTTTACCA TCACATGATGAAGCTCTTCAAATGTTCTGCATGTACGCTTTTGATCAGAAAGAGCCAAAGGATGGTTTTGAGGGGCTTGC TTGGAAAGTTAGTGATCTTGTAGGTAGCCTTCCGTTGGGGTTAAAGGTTATGGGCTCCTATTTTCGAGGAATGTCCGAGC AAGAATGGATAAAGGCACTACCAAAGTTAAAGACTCACCTTGACCGAGATAGAGAAATTCCGAGCATTTTAAAGTTTAGC TATGATGCTTTACATGATGAAGACAAAAGTTTATTTCTTCATATAGCCTGCTTTTTCGATGATGAACCAGTTGATATAGT GGAAGGCTGTCTAGCAAAATGTTTTTTGGATGTGACACAAGGGATTCGCGTCTTAGTTGAAAAATCTCTCATATCTATTG AAGACGAAATGATAAAGATGTCTAAGTTGCTAGTCCAACTAGGAAGACAAATTGTGCAAAATGAATCTGTTAGTGAACCT GGAAAGCGCCGGTTTTTGAATGATGCAAGCGATATTGGCGAAGTACTTAGTGATGATAGAGCAGGTAACAGCAGTGTCAT AGGAATAAATCTTGAGCCGGATGATGAAATAACATGGACAAGTGAAAGAGCCTTTGAAAGATTGTCTCATCTTCAATTCT TAAGAATCCTTGGCAAATGCGTTGAACCCCAATCTATGAACTATTTATCCCAAAAACTTAGAGTACTAATTTGGCGGAAT TTCAAGATAACATGTTTTCCTTCAAGTTTTAATCCAAAGTTCCTAGTCAAACTCGAGATGCATTCTAGCAATCTTGTGAA ATTTTGGGAAGGGATTAAACCGCTCAACAATCTCAAATGGATGGATTTGAGTGATTCAAGAAAGTTGGAAGAGCTTCCTG ATTTCTCAACTGCTACTAATCTACATGACTTGAACCTCTCGGGCTGCGAAAGGCTGGTGGAACTTCCTTCTTCTATTGGA AGTGCAGTTAATCTCCACCAGTTGAATTTTCACAATTGCTGGTGTCTGGTGAAACTCCCTTCCTCTATTGGAAATGCAGT TAATCTCCGAGAACTGAATCTCGAGTATTGTTCAAGTCTTGTGGAGCTCCCTTCCTCTATTTGGAACATCGTTAATCTTA ATGTACTGAATCTCGCTTATTGCTCAAGTCTGGTGGAGCTCCCTTCCTCAGATCTATATTCGTTGAAAAGTTATCATGAG AGTTCAACAGACATTCAAGAGCTTGATCCATGGATAGGGAGAATATCTTGTCTACAAGAACTTATACTATCCGAAATGAA CAAGCTGGTATCACTCCCTCAGCTTCCCGATTCACTATTGCACCTACATGCAGAAAAGTGTGAGTCCCTGGAGAGACTAG ATTGCGCCTTTCGCAATCCCGATATTAGTCTCAACTTCCGTCACTGCTTCAAACTAAATCAAGAAGCCAAAGATCTCATC ATCCGAAGTGGTACATTTGGAGTCTTTCCCGCTAAAGAAGTGCCTCAGTGCTTCACTTACCGATCTTCTGGGAGTTCAGT AACTGTGACGTTGAATCAAATGCCTGTTGGCAAATCAACCAAATTTAACGTTGCCGTGATATGTGATATTGACCCATTCG AGTTTGGAGAAACGAAACAAGAAGATATCACTTGTCGCGTCACGTCCGGAGGGAATGCTATCACCTTTAATTTTTGCCCA GGAAGACGAATTTATCCGGGGCATCTGTACAAATACGAGATTGAGGTTGAAACGGAGGATGTGGCTTCCACCGAGCTTGT TTTTGAGTTCGAGATTAACTATGCAATTGCTGAAGACGAGGTGACGTGGAAGATAAGAGGATGTGGGATACTCCAACTCT TGGACGGCCCTTTATTGAGCTTAAGAGATGGCGATGGAGATTTTTGA |
| AA seq | Len:709 aa MSQLTNETCTSISHLGVVKDRLKDKKVLVVLDDVDRLVQLEAMAKESSWFGPGSRIIITTQDQKVLKASGINHIHKVCLP SHDEALQMFCMYAFDQKEPKDGFEGLAWKVSDLVGSLPLGLKVMGSYFRGMSEQEWIKALPKLKTHLDRDREIPSILKFS YDALHDEDKSLFLHIACFFDDEPVDIVEGCLAKCFLDVTQGIRVLVEKSLISIEDEMIKMSKLLVQLGRQIVQNESVSEP GKRRFLNDASDIGEVLSDDRAGNSSVIGINLEPDDEITWTSERAFERLSHLQFLRILGKCVEPQSMNYLSQKLRVLIWRN FKITCFPSSFNPKFLVKLEMHSSNLVKFWEGIKPLNNLKWMDLSDSRKLEELPDFSTATNLHDLNLSGCERLVELPSSIG SAVNLHQLNFHNCWCLVKLPSSIGNAVNLRELNLEYCSSLVELPSSIWNIVNLNVLNLAYCSSLVELPSSDLYSLKSYHE SSTDIQELDPWIGRISCLQELILSEMNKLVSLPQLPDSLLHLHAEKCESLERLDCAFRNPDISLNFRHCFKLNQEAKDLI IRSGTFGVFPAKEVPQCFTYRSSGSSVTVTLNQMPVGKSTKFNVAVICDIDPFEFGETKQEDITCRVTSGGNAITFNFCP GRRIYPGHLYKYEIEVETEDVASTELVFEFEINYAIAEDEVTWKIRGCGILQLLDGPLLSLRDGDGDF* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |