Names & Information
Knowledge of BnaA08G0172400GG:
| Gene Name | BnaA08G0172400GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: putative disease resistance protein At4g11170 [Brassica rapa] |
| Best Hit (SwissProt) | Disease resistance protein TAO1 OS=Arabidopsis thaliana GN=TAO1 PE=3 SV=1 |
| NT seq | Len:3555 nt ATGTTAGGTAGATCCACTGACTACGCTGGCCCACAAATTTCGTGTGGAAAAGTGATACCTATGTTCCACGATGGTAACTT TCTTTCTTCTTCAGTCAATGGGATAACAGTTCCGTGTTGTGTTTCTGCTGCTGCAATCTGCTTCTACGCCCTTTTGGGTA CAGTATTTTTCAACAGGAAATCAAGATCCCATCAAGAAAACAAAACAATGGCTTCTTCTTCTTTAACTCGTTTGGCTCCT CCGTCTTCTTTGCCTCCCAATTGTAAACACCAAGTCTTCCCAAGCTTCCACGGGGTAGATGTCCTCGAAAACTTTCTCAG CCACATTGTCAAGGAGTTCAAGAGCAACGCAATCGACCTATTCATTGACAATAACATAGAGAGAAGTAAGTCAATCGGTC CCGCGCTCATAGAAGCTATTAGAGGGTCGAGGGTTGCTATTGTCTTGCTCTCGAAGAACTATGCTTCGTCTACATGGTGC TTGAACGAGCTGGTGGAGATCATGGAGTGCAGAGAAGAGGTTGGTCAAACAGTGATAACCATTTTCTATCAAGTGAATCC AACTGATATAAAGAAGCAGAAGAGCTATTTTGGGAAGGTCTTCAGAAAAACTTGTAAAGGCAAAAGAAATGAGGAGATCC AAAGATGGAAACATGCTTTGACAGATGTGGCCCAAATCGAAGGTTATCATTCAATAAACTGGTTCAATGAATCAGAGATG ATTGAATATATTGCCACTGATGTTTCGAACAAGTTGAACCTTTCCGCACCATCCAGTGATTTTGACGGCTTCGTTGGCAT GAAATCCCAGATGGTAACTATGGGACCATTGTTACAGCTAGATTCAGAAGAGGTGAGAAAAATAGGGATCTTGGGTCAGC CTGGGATCGGTAAGACCACCATTGCTAGATATATATTCAACACATACTCTCGAGAATTCCAACTGAGTGTATTTATGAAT AATATCAAAAGAAAGTATGCAACAACAGCTTGTTCTGATGACTATAGTGTGAAGTTGGATTTACAAAAACATTTTATGTC TCAACTAACCAATGTGACAGATATCAATAATTTTTCACATTTGGGAATTGCCAAACACAGACTGAAAGACAAGAAAGTTC TTGTCGTTCTTGATGATGTGGATCGGTTAGTCCAAGTGGAAGCCTTTGCGAAAGAAACTAATTGGTTTGGTCCAGGGACT CGGATTATAATCACATCACAAGATCAAAGGGTTTTAAAAGCAAGTGGGATCAACCATATTCACAAGGTGAATTTTCCATC AGATGATGAAGCTCTTCAAATGTTCTGCATGTATGCTTTTGATCAGAAATACCCAAAGGATGGTTTCGAGGAGCTGGCTT GTGAAGTTGTGAGTCTTGTAGGTAGACTTCCGTTGGGGCTAAAGGTTATGGGATCCTATTTTCGGGGATCGTTTGAGCAA GAGTGGACAGAGGCACTACCAAAGTTAAGGACTCACCTTGACCGAGATGGAGAAATTGCGAGCATTTTAAAGTTTAGTTA TGATTCCTTATGTGATGAAGATAAACGTTTATTTCTTCATATTGCCTGCTTCTTCAATTGTGAAAAAGTTGGTATAGTGG AAGACTGTCTTGCAAAATGTTTTTCGGATGTCAGACATGGGCGTGGTGTCTTAGCTGAAAAATCTCTTATATCTATAAAT ATGGATTGGGGAACAATAGAGATGACCAAGTTGCTAGTCCAACTGGGAAGAAAAATTGTGCGAGAACAATCGGTTAATGA GCCTGGAAAACGACAATTTTTGAATGATGCAATTGAGATTTGTGAAGTATTGAGTGATGATAGAGCCGACAGTAGCAGCG TCATAGGAATAAATGTTGAGACTTATGAAGACGTAGAATGTACAAGTGAAAGAGCCTTTGAAAGATTGTATAATCTTCAA TTCTTAAGAATCCTTGGCAAAGGCGTTAATCCTCAAAGTATTAACCACATATCCCAAAAACTTAAAGTACTTATTTGGCT GAATTCCGAGATGACATGTTTTCCTTCAAATTTTAATCCAAAGTTCCTAGTCAAACTAGAGATGATGAATAGCAAGCTTA AGAAATTGTGGGAAGAAACTAAACCTCTCAATAATCTCAAGTGGATGAATTTAAGTCGTTCAAGAAGATTGGAAGAGCTT CCAGATCTCTCAACTGCCACTAATCTATATGACCTGGATCTCTCATATTGCTCAAGTCTCGTGAAACTCCCTTCTTCTAT TGGGAATGCAATTAATCTCCAAAGTCTGCATCTTAGTTTTTGCTCAAATTTGGTGGAGATCCCTCCGTCTATTGGAAATG CAGTTAATATAAAAAAAATTTCTCTCATTCACTGCTCAAGTCTTGTGGAGATTCCTACATCTATTACTACAATCACTAGT CTCACATCTCTTGATATCAGTGGATGCTCAAGTTTGATGAAGCTTCCTGACAACATTGAAACATTCACTGAACCCAATCA CATTAATCTCAGTGGTTGTTCAAGCTTAGTGGAGATTCCTTCCTCTATTGTGAATGCAAAAAATCTCCAGAAATTGGATC TTAGTAATTGTTTAAGCTTGGTGGAACTCCCTTCCTCTATTGGGAATGCAATTAATCTTCAGAAATTGAATCTCAGTCAT TGCTCAAGTTTGGTGGAGCTCCCTTTCTCTATTGGGAATGCAACTAATCTTCAAGAACTGAATCTCAGTCATTGTTCAAG TCTGGTGGAACTCCCTTCCTCTATTGGGAATGCAACTAATCTTGAAGAACTGAATCTCAGTCATTGTTCAAGTGTGGTGG AGCTACCTTTCTCTATTGGGAGTGCCATTAATCTTCAAAAATTGGATCTCAGCCGTTGCTCAAGCTTGGTAAAGCTCCCT TCCTCTATTGGGAATGCAATTAATTTTCATAAATTGAATCTCAGTGATGATTGGTCAAGTATGGTGGAGCTTCCTTTTTT TATGAGAAACCTTGATAGATTGTTGAAATGCTCAAAGTCAGAGGTTCTTCCGGCTGACAATAACTTTCAATCTATCAATC TCTCGGACGAGTCTTCGTTTAAAATTTGTCCTGATCAGAGTTCCACAATCATACGAGAGCTTGATCCATGGATCTGGAGA ATATCTCATCTACGTACACTTGTACTAAACGGAATGAAGAAGCTGGTATCACTCCCTCCGCTTCCAGATTCGCTATTGTT CTTAGATGCAGAAGATTGTGAGTCCCTGGAGAGACTAGATTGCTCCTTTGACAATCCAGATATTTGTCTCAACTTTGTTA ACTGCTTCAAACTAAATCAAGAAGCAAGAGATCTCATCAGCCTGACGCCGACCAATGGATATGCAGTCTTTCCCGGTACA GAAGTGCCTCAGTGCTTCACTTACCGATCATCTGGGAGTTCCTTAACTGTGAAGTTGATTCAAAAGTCTCTTGGCATATC AACCAAATTTAAGGCTTGCATCTTAAGTGCGGATTTGGAGGGAAATAACTTTCCACATTGGTCACAAGCATCGGTTTGTT GTGGCATCATTAAGATTTCTAGACATCTTGAATAA |
| AA seq | Len:1185 aa MLGRSTDYAGPQISCGKVIPMFHDGNFLSSSVNGITVPCCVSAAAICFYALLGTVFFNRKSRSHQENKTMASSSLTRLAP PSSLPPNCKHQVFPSFHGVDVLENFLSHIVKEFKSNAIDLFIDNNIERSKSIGPALIEAIRGSRVAIVLLSKNYASSTWC LNELVEIMECREEVGQTVITIFYQVNPTDIKKQKSYFGKVFRKTCKGKRNEEIQRWKHALTDVAQIEGYHSINWFNESEM IEYIATDVSNKLNLSAPSSDFDGFVGMKSQMVTMGPLLQLDSEEVRKIGILGQPGIGKTTIARYIFNTYSREFQLSVFMN NIKRKYATTACSDDYSVKLDLQKHFMSQLTNVTDINNFSHLGIAKHRLKDKKVLVVLDDVDRLVQVEAFAKETNWFGPGT RIIITSQDQRVLKASGINHIHKVNFPSDDEALQMFCMYAFDQKYPKDGFEELACEVVSLVGRLPLGLKVMGSYFRGSFEQ EWTEALPKLRTHLDRDGEIASILKFSYDSLCDEDKRLFLHIACFFNCEKVGIVEDCLAKCFSDVRHGRGVLAEKSLISIN MDWGTIEMTKLLVQLGRKIVREQSVNEPGKRQFLNDAIEICEVLSDDRADSSSVIGINVETYEDVECTSERAFERLYNLQ FLRILGKGVNPQSINHISQKLKVLIWLNSEMTCFPSNFNPKFLVKLEMMNSKLKKLWEETKPLNNLKWMNLSRSRRLEEL PDLSTATNLYDLDLSYCSSLVKLPSSIGNAINLQSLHLSFCSNLVEIPPSIGNAVNIKKISLIHCSSLVEIPTSITTITS LTSLDISGCSSLMKLPDNIETFTEPNHINLSGCSSLVEIPSSIVNAKNLQKLDLSNCLSLVELPSSIGNAINLQKLNLSH CSSLVELPFSIGNATNLQELNLSHCSSLVELPSSIGNATNLEELNLSHCSSVVELPFSIGSAINLQKLDLSRCSSLVKLP SSIGNAINFHKLNLSDDWSSMVELPFFMRNLDRLLKCSKSEVLPADNNFQSINLSDESSFKICPDQSSTIIRELDPWIWR ISHLRTLVLNGMKKLVSLPPLPDSLLFLDAEDCESLERLDCSFDNPDICLNFVNCFKLNQEARDLISLTPTNGYAVFPGT EVPQCFTYRSSGSSLTVKLIQKSLGISTKFKACILSADLEGNNFPHWSQASVCCGIIKISRHLE* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0000166 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |