Names & Information
Knowledge of BnaA08G0176000QU:
| Gene Name | BnaA08G0176000QU |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaA08g15160D [Brassica napus] |
| Best Hit (SwissProt) | U-box domain-containing protein 5 OS=Arabidopsis thaliana GN=PUB5 PE=3 SV=3 |
| NT seq | Len:5388 nt ATGGATTCTTCTTTCTTCCTCCTTTCGACCTGTGCTGTTATCATAGGATTCTTCACGATTTTTGTTAAGGTTTATAAAAA ATTCAGATCCAAACCACAAATTGCTTCTTCTCCCTCTCCCAATTGGAAACCTCAGGTCTCGGCGAGCTCCACTCCATCAA ATGATTTCCAAGGAATATCTAACGAATCGCAACTGCACGCGGTCTACATATTCTGCGCAGATACGTTACAGTACTCCTTC GCCAGCCACCTCTCCGTTGATTTCCGCCGGAAAAACTTTGCTACTTTTGTAAATTGCAATAGGACTCTCGATGTGATAGA GGGAGCTAGCGCTTCGGTAATTGTTTTCTCCAAGGACTGCTTATCCTCTGCCTCGTACCTGGATAAGCTCGTGACGATAC TACAGTGCCAGAGGAAAAACAATATGCTGGTGGTTCCTGTGTTCTACGGCATTAGTCCAGCAGACGTTGCTGTGCCAGAG GAGCATGAGTCAGCTGATCGGATAAGCGCGCTCAAAGAACTAAGAGATTTACCAGTTCACCAGTCTAGGGAGGAATGTAA TGAGTGTCAAGTCGTGGAAGAGATTGTCAGCGATGTGTATGAAAAATTATTTTCCAAGGAACAAATTGGAATCAAGTCGA GGCTGCTGGAAATAGAACAGTATCTTTGCAAGCAACCAAAGGGTAATATCCGCCGCATAGGAATTTGGGGTATGCCAGGC ATAGGCAAGACCACACTTGCTAAAGCAGTTTTTGACCAGATCTCTGGAGGCTACGAAGCTTCTTGTTTCATCAAACACTT TGACAAAGCTTTCCATGAGAAGGGACTTTACGGTTTGTTGGAGGATCATTTTGGGAAACTTCTCAAGGAACTGTCTCGAG TAGGGGCCAAATTAAGGAAGAAGAGAACTCTTGTTGTCCTTGATGATGTGCATAATTCTGGATTTGCCGAGTCTTTCCTG AGAGGTTTTCGTTGGTTTGGTCCGGGAAGCATAGTTATCGTAATATCCAGAGATAAACAAGTTTTCCGACTTTGTCAGAT CAATCACGTGTACGAGGTTCAGAGCTTAAATGAGAATGAGGCTCTGGAGCTATTCTCTCAGCGTGCATTTGGAGAAGGTA TAAGAGATCAAAATCTCCCGAAACCATCAATGGAAATGATAGACTATGCTAATGGAAATCCATTTGCTCTCAGTTGTTAT GGCAACGAGCTTAAGGGAATGAAACTCTCAGAAATGGAGACCACATTCCTCGAGCTCAAGCGACGCACGACATATAAGAT TCATGATTTATTCAAGAGCAGCTACGACACACTTAATGACAAGGAGAAGAACATTTTTCTGGACATTGCTTGTTTCTTCA ATGGAGAAAATGTTGACTATGTCATGCAGCTGCTCGAGGGATGTGGTTTTCTTCCACATGTTGGGATTGATGTTCTTGTG GAGAAGTCTCTGGTGACTATTTCAGACAAAAGAGTGAAAATGCATAGAATAATCCAAGACTTCGGCAGAGAAATAATCAA CGGAGAAGCAGTAGAGATGGAGCAGCGTCGCAGACTATGGGAGCCTTCGACCATCAAATTTCTACTTGAAGGTGAAAAAC TCAAAGCAAAGGAAGATGTCAATGCAACCTATACACATCCTCTGGGCACTGAAGACATCGAAGCCATATTTCTGGACGCA TCTAATTTAAGCTTTGATGTGAACTCTGCTGCTTTTGAGGATATGCTAAGCCTTAGATTTTTGAAGATTTATTGTTCCAG TTATGAAAAAGATAGTAGAGTCCGCCTTCCCAAAGGACTTGAGGCTCTGTCAAATGAGCTAAGACTCCTCCACTGGGAGA ATTATCCTTTGAAATCCTTGCCACAAGACTTTGACCCATGCCACCTCGTTGAACTCAATTTGTCTTACAGTCAGCTTCAG AAACTTTGGGGAGGAACCAAGAATCTCAAGATGCTGAAGGTGGTCAGGCTTTGTCATTCCCAGCAGCTAACTGATATTAG CGATCTTTGTAAAGCTCAAGATCTCGAGGTGTTAGATCTCCGAGGGTGTACCCAACTGCAGAATTGTCCAGCCATGGGTC AGTTACGGCATCTCAGAGTTGTAAACCTTTCAGGTTGCACAGGGATCCGAAGCTTCCCGGAGGTTTCACCAAATATTGAG GAACTATATCTACAGGGAACTGATATTTTAAACCCTGAGCAACTAACAAGCCTGATCAAACCCGTGTCAGCTAATCAACA TCTTGGTAAACTTGTTCGCCTGAATATGAAAGATTGTGTTCATTTGAAAAGTCTGCCTGACATGGCTGATTTAGAATCTC TTCAAGTTCTTGATCTCTCTGGATGCTCAAAGCTCAGTGTTATTCAGGGTTTCCCACGAAACCTGAAAGAATTATATCTT GGTGGCACTGCCATAGAAGAACTTCCACAGATTCCCTTGGGTCTTGAAATCTTGAATGCACATGGTCAACATTTTTGGGA ATATCTAACATTTGATATACCATCAGGATCTTCTGTGATTATACAACTGGGTCAAAACACGCTTGGAATTTCCGTATTAG TACAAGTTACATTTTCGAAGGATTACTGCGAGGCTAGTGGTGGTTTTAACGTTACTTGTGTTTGCAGATGGAAAGATAAG AATTATGTCTCTCATAAGCGAGAAAAAGACTTCCATTGTTGGCCTCCAGAGGAAGAAGGTGTTTCAAAGGACCACACGTT CGTCTTCTGTGATCTCGATATTCATCCTGGTGCCTGTGAAGAAAATGATACCGGCATATTAGCTGACCTTGTCGTATTTG AGTTCTTTACTGTGAACAAGCAGAAGAAGCTATTAGATGAGAGTTGTACAGTGACGAAATGTGGAGTATATGTGATAACT GCTGCAGATCGAGATACAAGCCCTAACATGACTCCATCATTTGATTACCTGCAGGAGCTTTCTGACAATGATGCTCGAAA CGTATATGATGGCTTAGACGAGGATGAAAGAACTTTATTTCTTTACATTGCGTGTCTGTTCAATGATGAGGAAGCTGATT TGCTGGCACCACTTAGCAATGGCTTGGAAATTAGTTCTGGGATCAAGATCTTAACCGATAAGTCTCTCATACATATATCT CCATACGGTGTTTTAGTACGAGAAGGCTTACTTCAGAAAATAGGTATGGAGATGATCAATAGACGGAGACAGGCGCAAGC TTTGACCAATTTAGCAGATATAGCCGGAGTGGATTCTCGGAAGTGGGATAATAACGCTAACATGATAGAGAACTTGCCTC ACTCCTTCAAGATGCACTCTTCAATGTGCTTAGCCTTGAAGAAATTAGTTGATAGAGTCATGAAAATATTTCCTGAAATA GAAGCTGCTAGACCCGGATCTTCCACAGCGATACAGCCTCTCAACGAAGCTTTGGAGAAAGCTAAGCTGCTTCTTCAATA CTGCAGTGAATCCAGTAAACTCTACATGGCAGTAACAGGAGATGATATACTCACAAGAGGTTCTAGATCCAAAAAGTTAT TAGAACAAAGCTTAGCTGACATCAGAACCATGGTTCCTACTGCTTTAGCTATCCAGATACTTGAGGTTCTCCAGGATCTT AAGTCAACAGAGTTGTCTCTAGAATCATCTGAAGAAGAAGCTGGGAAAGATATTAGGGAACTGATGCGACAAAGCACATC TTCTTCTGTGTCTTCTGATGAGATCAGAGATTTCCACTTTGCAGCCCTAAAGCTCCAGCTCTCAACACCTGAAGCCGTTG CGGTAGAGAGAAGGTCCTTAAAGTCGCTTTATGGGAAGCTAGGCGAGTGTGAAGGGAACAAGAGACAGATTCTGAAGTAT CTCCTCTGCCTCCTGAAGAAGCATGAGAAAATCATATGGAGAGATCACAAAGATAACTCTCTCACACTGCATCAGTCTTC GAATGATTCTGTGTGTGCTGGTGTTGCAGATGCCGGGTGTTCTGAGGAATACAATGCAACACTTCCCGAGCATTTCAAAT GCCCTCTTTCTCTTACCGTGATGTATGATCCTGTCATCATTTCTTCGGGCCACACGTTTGAGAGGATGTCGATTCAGAAA TGGTTTGAATGTAATGATTCATGTCCTGTATCGAAAAGGATACTGGATGATTTCACATTGCAGTCCAACGTAGCAATGAA GGATCAGATATCAAAATGGTGCTCCAAGAAGGGTCTTGATGTTCAAGATCCAGCAATGAAGCACGTAAACGCTTCACATA ATCTTGACTTCTCCATTCCTAGTTTTTCAAGTCCTCTGTACAATATCTCAGACCTCAGCTGTTTCAGGAGTAGTGACATC AGTTCTAGCTTCTCCACTGAATCAGAAACAGAAATCAGAGATTCTACTCACAGCGAGTGGGAGATAGAACCCTTATGTGA ACTCAGTAAGCTTCCATGGAATGCGCAGGTCAAGGTTGTTCAAGATGTAAGAAGTCTTTTTGAGCAAGATTCTAAGGCTG CTCGGTCTATGTCGCCGAGTAAATTTATTGAGCCACTTGTCACATTCTTGAAGAATGCTCATGAAAGAAATGGCACTGAC GTAGTAAAGGATGGATTGGAGTTATTATTGACTTTCCTCAGTGGAAACCGAAGGGCTATAGACTCTCTGGGAGAAGAAGT ATTTGAAATGTTGTGTGTCTTTCTCGGGTCTGAGTTAGTAGCTGAAGAAACTCTAAACGTACTCGAGGTTCTCTCTAACC ACCCACACAGTCTCTCCAAGATAACTTCAACAGGCTCTCTCTCTTGCCTTTTGAAGATCGCTGAGTCTGGAGCAGAAAAT CTTCAAGAACAAGCAATGATCACACTCAAGAAGCTGTGTTCAAGCAATGAGATTTGTCTGGAAATGGTCTCTCTCGGTTT TGTCCAGAAGTTAACATCTTTCTTGCAACAAAACGTCTTCAGCAAACACTCAATCATCATGCTGAAGAATCTCTGCAACA CGGAGAAAGGTCGGGTTTGTGTAACCGAAACCCCGGGTTGTTTAGCTTCAATATCTGATTTATTGGACTCAAATGTTTCC GAGGAGGTAGAGAATGCAATCTCCATCCTCCTCCAGCTCTGTGTGGAGAAGATAGAGTATTGCTATCTTGTGGTGAGAGA AGGCCTTAATATCTACTCATCTCTTCTCTTGATATCCAACAACGGAACCGAGGAAGCGAAGGTGGGTGCATCTGAATTGC TTAGAGCTCTTGAAGAAGTAGAAGAAGTAGAAGAAGAAGAAGAATCCTCCACACCACAAGGAGAAGCAACTACTTCACTG GTTGTTACTCATCAGGAACCTATAACAAAACCATCTCCAAAGAATTCTGGTCTTTTTGGACTCAGTTTCTCCATTTCCAA GAAGAAGAAGAAGAAGATAAAACTATAA |
| AA seq | Len:1796 aa MDSSFFLLSTCAVIIGFFTIFVKVYKKFRSKPQIASSPSPNWKPQVSASSTPSNDFQGISNESQLHAVYIFCADTLQYSF ASHLSVDFRRKNFATFVNCNRTLDVIEGASASVIVFSKDCLSSASYLDKLVTILQCQRKNNMLVVPVFYGISPADVAVPE EHESADRISALKELRDLPVHQSREECNECQVVEEIVSDVYEKLFSKEQIGIKSRLLEIEQYLCKQPKGNIRRIGIWGMPG IGKTTLAKAVFDQISGGYEASCFIKHFDKAFHEKGLYGLLEDHFGKLLKELSRVGAKLRKKRTLVVLDDVHNSGFAESFL RGFRWFGPGSIVIVISRDKQVFRLCQINHVYEVQSLNENEALELFSQRAFGEGIRDQNLPKPSMEMIDYANGNPFALSCY GNELKGMKLSEMETTFLELKRRTTYKIHDLFKSSYDTLNDKEKNIFLDIACFFNGENVDYVMQLLEGCGFLPHVGIDVLV EKSLVTISDKRVKMHRIIQDFGREIINGEAVEMEQRRRLWEPSTIKFLLEGEKLKAKEDVNATYTHPLGTEDIEAIFLDA SNLSFDVNSAAFEDMLSLRFLKIYCSSYEKDSRVRLPKGLEALSNELRLLHWENYPLKSLPQDFDPCHLVELNLSYSQLQ KLWGGTKNLKMLKVVRLCHSQQLTDISDLCKAQDLEVLDLRGCTQLQNCPAMGQLRHLRVVNLSGCTGIRSFPEVSPNIE ELYLQGTDILNPEQLTSLIKPVSANQHLGKLVRLNMKDCVHLKSLPDMADLESLQVLDLSGCSKLSVIQGFPRNLKELYL GGTAIEELPQIPLGLEILNAHGQHFWEYLTFDIPSGSSVIIQLGQNTLGISVLVQVTFSKDYCEASGGFNVTCVCRWKDK NYVSHKREKDFHCWPPEEEGVSKDHTFVFCDLDIHPGACEENDTGILADLVVFEFFTVNKQKKLLDESCTVTKCGVYVIT AADRDTSPNMTPSFDYLQELSDNDARNVYDGLDEDERTLFLYIACLFNDEEADLLAPLSNGLEISSGIKILTDKSLIHIS PYGVLVREGLLQKIGMEMINRRRQAQALTNLADIAGVDSRKWDNNANMIENLPHSFKMHSSMCLALKKLVDRVMKIFPEI EAARPGSSTAIQPLNEALEKAKLLLQYCSESSKLYMAVTGDDILTRGSRSKKLLEQSLADIRTMVPTALAIQILEVLQDL KSTELSLESSEEEAGKDIRELMRQSTSSSVSSDEIRDFHFAALKLQLSTPEAVAVERRSLKSLYGKLGECEGNKRQILKY LLCLLKKHEKIIWRDHKDNSLTLHQSSNDSVCAGVADAGCSEEYNATLPEHFKCPLSLTVMYDPVIISSGHTFERMSIQK WFECNDSCPVSKRILDDFTLQSNVAMKDQISKWCSKKGLDVQDPAMKHVNASHNLDFSIPSFSSPLYNISDLSCFRSSDI SSSFSTESETEIRDSTHSEWEIEPLCELSKLPWNAQVKVVQDVRSLFEQDSKAARSMSPSKFIEPLVTFLKNAHERNGTD VVKDGLELLLTFLSGNRRAIDSLGEEVFEMLCVFLGSELVAEETLNVLEVLSNHPHSLSKITSTGSLSCLLKIAESGAEN LQEQAMITLKKLCSSNEICLEMVSLGFVQKLTSFLQQNVFSKHSIIMLKNLCNTEKGRVCVTETPGCLASISDLLDSNVS EEVENAISILLQLCVEKIEYCYLVVREGLNIYSSLLLISNNGTEEAKVGASELLRALEEVEEVEEEEESSTPQGEATTSL VVTHQEPITKPSPKNSGLFGLSFSISKKKKKKIKL* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0000151 |
| Pfam | Leucine Rich Repeat |
| KEGG | hypothetical protein; K16225 probable WRKY transcription factor 52 (A) |