Names & Information
Knowledge of BnaA08G0176100QU:
| Gene Name | BnaA08G0176100QU |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | hypothetical protein CARUB_v10003971mg [Capsella rubella] |
| Best Hit (SwissProt) | Probable WRKY transcription factor 16 OS=Arabidopsis thaliana GN=WRKY16 PE=2 SV=1 |
| NT seq | Len:4815 nt ATGGACGATGGAACCAAAACTACACCCACTGTTTATATCCACTGCGTCGGCACATTACAGTATTCCTTCGCCAGCCACCT CTCCGTCGAACTCCGCCGGAAAGGCATTTCTACATTTGTGAACTCCAAGGGAACTCTCGATGTGATAGACGGAGCTAGCG CTTCGGTGGTTGTTTTCTCCAAGGACTGCTTATCCTGTGCCTCATACCTGGATAAGCTCGTGACGGTACTCCAGTGCCAG AGGAAAAACAATATGTTGGTGGTTCCAGTGTTCTACTGGATTAGTCCATCAGACGTTGCGGTGCCAAAGGAGGACGAGTC AGCTGATCGGATAAACGCGCTCAAAGAACTAATAAAATTACCAGATCACCGGTCTAGGGAGGAATGCGATGATTCTGAAC TTGTAGATGAGATTGTCAAGACTATTAATGAGAAACTTTTTCCCGCGGAAAAAATTGGAATCAACAAGAAGCTGCTGGAG TTCGAAAACTTGGTTTGCAAGCAACCATGGGGTATCCGTCGCACAGGAATATGGGGAATGCCAGGCATTGGCAAGACAAC GCTTGCTAAGGCAGTTTTTGACCAAATATCTGGAAGCTACGAAGCTTCTTGTTTTATCAAACACTTTGACGAAGCTTTCC ATGAGAAGGGACTTCATTCTTTGTTGGAGGAACATTTTGGGAAAACTTTGAAAGAATTGCGACGCCTCCCCAGGGACAAG TTAAACAAGAAAAGAACTCTTGTTGTTCTTGATGATGTGCAGAGTCCGTTAGTTGCCGAGTCTTTCCTCAGAGGGGTTCA TTGGTTTAGCCCGGGAAGCCTAATCATCATAACCTCTAGAGATAAACAAGTGTACCGCCATTGTCAGATAAATCATGTCT ATGAAGTTCAGAGCTTAAATGAGAATGAGGCTCTGGAGCTATTCTCTCAGCGTGCATTTGGAGAAGGTATAAGAGATCAA AATCTCCCGAAACCATCAATGGAAATGATAGACTATGCTAATGGAAATCCATTTGCTCTCAGTTGTTATGGCAACGAGCT TAAGGGAATGAAACTCTCAGAAATGGAGACCACATTCCTCGAGCTCAAGCGACGCACGACATATAAGATTCATGATTTAT TCAAGAGCAGCTACGACACACTTAATGACAAGGAGAAGAACATTTTTCTGGACATTGCTTGTTTCTTCAATGGAGAAAAT GTTGACTATGTCATGCAGCTGCTCGAGGGATGTGGTTTTCTTCCACATGTTGGGATTGATGTTCTTGTGGAGAAGTCTCT GGTGACTATTTCAGACAACAGAGTAAACATGCATAATCTCATCCAAGACTTTGGCCGAGAAATCATCAACGAGAGGTTTA GCAGACTGTGGGAACCTTGGAGCATCAAATCTCTACTTGAAGATGACGAATTCAAAGAAGAACGTGCACTGGACACTGAA GACGTAGAAGGCATATCCTTGGACACATCGAATTTACTCTTTGATGTGAAGCCCACTGCTTTTAGTAATATGCTTAACCT AAGGTTCCTTAAGATTTGCAGTTCCAGTTTTGAAAACCATGATGGACTCCGCCTTCCAAAAGGACTTGAGTCTCTGCCTA ATGAGCTAAGACTTCTCCACTGGGAGAACTATCCTTTGCAATCCTTACCACAAGATTTTGACCCATGTCACCTTGTTGAA CTCAATATGTGTTACAGTCAGCTTCAGAAACTTTGGGAAGGAACCAAGAACCTCAAGGTGTTGAAGATGGTTAAGCTTTG TCATTCTCAGCAGCTGATTGAGGTAGAAAATCTATGTAAAGCTCAAAATATCGAGAAAATAGAACTACAAGGCTGCACAA AGTTGCAGAGGTTTCCAGCCACGGATCATTTACAGAATCTCCGAGTTTTGAACCTTTCAGACTGCAAAGAGATCACAAAC TTGCCGGAGGTATCATCAAATATTGAGGAGTTACATCTCCAGGGAACTAGCATAAGAGAATTACCAGTATCCATTGTCTC CCTCTTCAAAAAGGCTAAGTGGAACCAAGAGCTTTCCAATCTTCTTACAAAATTCCCAGGTGATTCAAATGCTTTGGAAG ATAGCCTTGTCAGATTGGTGTCATCAAATCAGCATCTTGGCAAACTTGTTTTCCTGAATATGAAATATTGTTCTCATTTG GAGAGTCTACCTCAAATGGTTGATATAGAATCTCTTCAAGTTCTTGATCTGTCTGGATGCTCGGAGCTCGAGGCTATCCA GGGACTCCCACGCAACCTGAAAGAGTTATACGTTAATGGCACTGCCATAGAAAAACTTCCGCAGCTTCCCTTGAGTTTAG AAATATTGAATGCACATGGTTGTGTGTCTCTTATATCAATTCCTTACGATTTCGAGCGGCTTCCTAGGTATTACACTTTC ACTAATTGCTTTGCTCTCTCTGCATACAAGGTCAGCAAATTTGTAGAGAACGCTCTGGATAATGTGGAACGCATTGCCAG AGAGTATCACCAGGAACTCAGCAAATCACTGGCTTTCAGCTTCACTGTGTCAAGTAAATATTTCACAGGTGATTTGCAAC CAGGGTCTTCTGTGATGATACAGCTGAATTCTCCTATAAGAAGCACACTAGGGTTTGCTATTTTTGTCCAAGTTTCATTT TCAGAGGATTACCACGAGGCTAGTGCTTTTGGAATTACTTGTGTTTGCAGATGGAAAGACAATAAATGCGTCTCTCACTG GATGGAAAAAAGTTTCCATTGTTGGACTCCAAGGGAAGGTGTTCAGATGGATCACACATTTGTTTTCTGTGATTTCAACA TGCATCCGAGTACCTGTGAAGAAAATGATGACCCTAGTATACTGGCTGGTCTTCTCGTCTTCGAATTCTTTACCCTGAAC AAGCAGAAGAGGGTTCAAGATGAGAGTTGTACAGTCAAGAAATGTGGAGTCCATGTGTTTACTGCTGCAAGTGAAGATGC CAGTCCCAACATAACTCGACCGCTTCCATCGCCGAATCACCAGCAGGAGCTTTTTTATCAAGATGTTGAAGAAGTGTTGA AGGTCATCTATGATGATTTAGACGTGGATAATAGAAATGTATTTAATTACATCACAAGTCTGTTCAATGAAGAGGATGAT GATTTCCTGGCAGCGCTTATAGCTAGTGTTGGCGTGCGGATTAGTTCTGTGTTCGGGGTCTTAGCCACCAAGTATCTGGT ACATATGTCTCCCCGTGGTATTTTTATGCTACATGGTTTACTACAGAAAATAAGTAGAGAGATCGTACATAGACAATCAG TCGACATGGCTTCTTCTTCTTCTTCTTCTTCTTCTTGCATTTGGAAATACGATATCTTCACAAGTTTCAGCGAGGAAGAT GACTGCAGTAATAAAATCAGACACCTTCTTCCGAAACTCAGACAAAAATGCAAGATGAAGACAAACAATTATGTTGGCCC AGAGCTTGTAAAAGAAATAAGAGAATCGAAGGGTTTGATTGTTGTGCTCTCAAAGAACTACGCCTCTTCGACTAAATGCT TGGATGAGTTGGTAGAGATTATAAAGTCCAAAGAAGAGCTGGCTCAAATGGTGGTGCCGATCTTCTACAATGTGGTTCCT TCTGATGTCAGACAACAGATTGGAGACTTTGGAAACGTCTTTAAAAAAACGTGCAAGGGAAAATCTGAGGGTGAGAAACA GAAATGGATGCAAGCCTTGACCGATGTAGTGAATATGGCAGAAATAGATGCTCGAAAGAGGGATAATGAAGCAAACATGA TAAAGAATTTGCGTCACTCACATACCCGACCCTGGACAGAAGCATGGGCTTGGGGTCTGGGAAAGGATTATCAGTTTACA AGGTCAATTTTTAAGAAAGAGAGCTTGCCAGCGTTGTTGGTAACTACTGTTTATAAACCCTGGCAATCTGCTAGACCTAC AGTTATCAGGGTGGGCTTTGCGCATTCATTTAAGATCATACAATCAACCATGGGGCAAATACTTGGCGTTGAATATAGCA ACGAAGGTGGAGGAGAGTACGTGCCCGGAACGTCACCTTTCCACGAGTTGTTAGGGGATTGCTTCTTCAAAATAATAACG ATTACAAGTCCACGTGACGCGTTGAACGCTGCTTCTGTTTCGAAATCTTTTGAATCCGCGGTCAAGAACGATAGGGCATG GAAGGAGTTTATTCCGCCGGATTATTCTTCTCTGATTCCTAAACCGCTAAATTTCTCATCGAAACAAAAAGTCTATTCCT ATCTTTGCGATCATTTCCTGATCGAGGATGGCAAAAAGAGCTTCTGGTTAGAGAAAGCGAGTGGGAAAAGGTGTTTTATG CTATCTGCGAGGGAACTCGATATAACATGGGGAAATAATCGCAATTATTGGCGGTGGATTTCAATTCCTGAAGCTAGGTT CAAAGAAGTACCTGTGCTTATTTCTGTATGTTGGTTTAATATTTGTGCCTTCACGAATTCTCGACTTCTATCTCCTGGAA CTCGTTACTCGGCTTACATTGTGTTCCAGACAAATGATGGATTTTATGGGTTCCAGAATATGCCGGTAAAAGCTAAATTA ATTTTGGTGGGGAAAGAATCTACCAAAAGATTCATATATTTTGATGGTGGGCCTTCGGATGGAAGGAGAGAGGGAGAAAT AAGAGATGTAAAGAAACCAGAGTGGAGGGAAGATGGATGGATGGAAGTAGAGCTTGGTGAATTCTTCAATGAAGATAGTT GTGATGAAATTAAGTTAAGACTTAAAGAAATTGAGTATCTTAACTGGAAAAGTGGTTTGATCATTCAAGGAGTTGAATTT CGCCCTCAACGGTAA |
| AA seq | Len:1605 aa MDDGTKTTPTVYIHCVGTLQYSFASHLSVELRRKGISTFVNSKGTLDVIDGASASVVVFSKDCLSCASYLDKLVTVLQCQ RKNNMLVVPVFYWISPSDVAVPKEDESADRINALKELIKLPDHRSREECDDSELVDEIVKTINEKLFPAEKIGINKKLLE FENLVCKQPWGIRRTGIWGMPGIGKTTLAKAVFDQISGSYEASCFIKHFDEAFHEKGLHSLLEEHFGKTLKELRRLPRDK LNKKRTLVVLDDVQSPLVAESFLRGVHWFSPGSLIIITSRDKQVYRHCQINHVYEVQSLNENEALELFSQRAFGEGIRDQ NLPKPSMEMIDYANGNPFALSCYGNELKGMKLSEMETTFLELKRRTTYKIHDLFKSSYDTLNDKEKNIFLDIACFFNGEN VDYVMQLLEGCGFLPHVGIDVLVEKSLVTISDNRVNMHNLIQDFGREIINERFSRLWEPWSIKSLLEDDEFKEERALDTE DVEGISLDTSNLLFDVKPTAFSNMLNLRFLKICSSSFENHDGLRLPKGLESLPNELRLLHWENYPLQSLPQDFDPCHLVE LNMCYSQLQKLWEGTKNLKVLKMVKLCHSQQLIEVENLCKAQNIEKIELQGCTKLQRFPATDHLQNLRVLNLSDCKEITN LPEVSSNIEELHLQGTSIRELPVSIVSLFKKAKWNQELSNLLTKFPGDSNALEDSLVRLVSSNQHLGKLVFLNMKYCSHL ESLPQMVDIESLQVLDLSGCSELEAIQGLPRNLKELYVNGTAIEKLPQLPLSLEILNAHGCVSLISIPYDFERLPRYYTF TNCFALSAYKVSKFVENALDNVERIAREYHQELSKSLAFSFTVSSKYFTGDLQPGSSVMIQLNSPIRSTLGFAIFVQVSF SEDYHEASAFGITCVCRWKDNKCVSHWMEKSFHCWTPREGVQMDHTFVFCDFNMHPSTCEENDDPSILAGLLVFEFFTLN KQKRVQDESCTVKKCGVHVFTAASEDASPNITRPLPSPNHQQELFYQDVEEVLKVIYDDLDVDNRNVFNYITSLFNEEDD DFLAALIASVGVRISSVFGVLATKYLVHMSPRGIFMLHGLLQKISREIVHRQSVDMASSSSSSSSCIWKYDIFTSFSEED DCSNKIRHLLPKLRQKCKMKTNNYVGPELVKEIRESKGLIVVLSKNYASSTKCLDELVEIIKSKEELAQMVVPIFYNVVP SDVRQQIGDFGNVFKKTCKGKSEGEKQKWMQALTDVVNMAEIDARKRDNEANMIKNLRHSHTRPWTEAWAWGLGKDYQFT RSIFKKESLPALLVTTVYKPWQSARPTVIRVGFAHSFKIIQSTMGQILGVEYSNEGGGEYVPGTSPFHELLGDCFFKIIT ITSPRDALNAASVSKSFESAVKNDRAWKEFIPPDYSSLIPKPLNFSSKQKVYSYLCDHFLIEDGKKSFWLEKASGKRCFM LSARELDITWGNNRNYWRWISIPEARFKEVPVLISVCWFNICAFTNSRLLSPGTRYSAYIVFQTNDGFYGFQNMPVKAKL ILVGKESTKRFIYFDGGPSDGRREGEIRDVKKPEWREDGWMEVELGEFFNEDSCDEIKLRLKEIEYLNWKSGLIIQGVEF RPQR* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | hypothetical protein; K16225 probable WRKY transcription factor 52 (A) |