Names & Information
Knowledge of BnaA08G0176200QU:
| Gene Name | BnaA08G0176200QU |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaA08g15180D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance protein RPS4 OS=Arabidopsis thaliana GN=RPS4 PE=2 SV=1 |
| NT seq | Len:3459 nt ATGGCTTCTTATTCTTCCGACCCTTCCTTCTCCTCCTCCAACTCCGTCCAATCACTACCGCCGAAGCATCAAGTGTTCAT CAACTTTCGAGGGAAAGAGCTGCGATTAACGTTCGTCAGCCATCTGGAGAAGGCGTTGAGAAGAGATGGGATCAACGTCT TTGTCGACAAAAACGAAACCAAAGGCAAAGATCTCAGCAGCCTCTTTTCAAGAATCGAAGAATCGAGGATCGCGCTCGCC ATCTTCTCGAGCATGTATACGGAATCAAAGTGGTGCTTGAACGAGCTGGTGAAGATCAATGAGTGCGTCCACTCAGGCAA ACTCGTGGTCATCCCCATCTTCTACAAGGTGGACACAGACGATGTCAAAAATCGCAACGGAACTTTCGGTGCTAAGTTAT GGGAATTGGCTAAAACTAAACCTGAAATGCTCGTCAAGTGGGTAAAAGCTTTGGAGGATGTTACAGAAAAGATAGGCTAT ACGTTAGGCGAAATGAGCGATGAAAGTGAATCCATAGAGAAAATTGTAAAAGGAGTCACTGAAGTGCTTTGGAAGATCCC CGCTGCTGGAGAGGACAAAATGACGCCCGAAGCTCCCATTGCAGGAGACGAGGACACCCCAGCTCCTCTGTGTGGCATCG AGCAACGTCTTGAGCAATTGCGAACGGTGTTCGATTTGAAGTGGGAGAGTACACGTACGATTGGTGTTGTTGGGATGCCT GGTATCGGTAAGACCACCCTCGCATATAAGCTGTATGAAGAATGGCAAGGGTATTTCGACCACCATGTTTTTCTTCATGA TGTCCGTGGAATATGGAAAGGCGGCTCCATGGATCATCGAAACATTTTCATGAATGAGTTGTTGCAGAGTTATGACCCCA ACCAAGAAGTCCCTGACCTTCTGCCTGAAGCAGTCAAGACACTCCTACTCAGTAAGAAGTCTCTTGTTGTTCTGGATAAT GTAAGTGACAAGATACAGATAGAGCTACTTCTCGGGGATTATGACTGGATTAGTGCAGGTAGCAGAATCATTATCACCAC TAGTGACTTGTCGGTGATCGAGGGGATAGTTGATGACACCTACGAGGTTGTGAGACTGAGTGGCATAGACAGCTTCCAGT ACTTCAACTATTTTGCATTTGGTAGTAAGGACCATACTCCAGACGATAACTTCATGAAGCTTTCTAGATTGTTTGTGGAT TATGCCCAAGGCAACCCATTCGCTCTCAATAGATTGGGTGTTGATCTTTATGGAAAAAACGAGGCTCACTGGAAAGATAC ACTTCGCAAGCTGGAAGAAAGTCCCACTAAGGCCATACAAGATTTCTTGCAGATAAGCTATGATGGACTAGAGCAGCTTC AAAAAGATGTCTTTCTCGATATCGCTTGTTTCTTTAGATCAGCGGATGAGTCCCATGTGAGGTGTTTAGTTGAGTCTTGT GACACTGAGTCCATTGCTGGTGTGAATGAGATAAATGATCTTGCCGGTAAATATTTTATAAACATTTCTGGCGGCCGAGT GGAGATGCATGATTTAATGTATACTTTTGGCAAGGAACTTGGTTCTAAAGGGTCGCGTAGCCTGTGGAACTATAAAGGCG TTGTTGATGCGCTGAAGAAAGGAGCGGTAGCAGACAGTGTGAGAGGTGTTTTTCTCGACATGTCTGAACTGACGGATAAA CATCATTTAAAACCTTATACCCTCAGCGGGATGCGTAATCTTAGGTACCTCAAATTCTATAATTCTCATTGCCATCGCGA ATGCAAAGCTGACGGCAACCTAAACTGCCCTGGCGGACTTGAATTACCGTTGGAAGAAATTCGATATTTCTATTGGCTTA AATTCCCTTTGAAGAAACTTCCAGAAGACTTCAACCCCAAGAATCTCACCGACCTTAACCTGCCTTACAGCGAGATTGAA GAGCTATGGGAGGCTCTTAAGGATACACCAAAGCTAAGGTGGGTTGATCTTAGCCACTCAAGCAAGTTATGCAAGCTGTC AGGGTTACAAAATGCCCAAAGACTCAAAAAGTTGAATCTTGAAGGTTGCACGAGTTTGCAGGAGTTGCCCCAGGAGATGA AACGTATGAAACGTCTTATTTTCCTCAACATGAGAGGATGCACGAGTCTCCGGGTTCTTCCACCTATGAATCTGATCTCT CTGGAAACGCTCATCCTCACCAACTGCTCAAGTCTTGAAGAATTCCGGGTGATTTCGGAGAATCTTGAAACTCTGTACTT AGATGGAACGGACATAAGTCAACTTCCTGAAGACATGGTGAAGCTCGAGAGACTGATTGTATTGAACTTGAAAAAATGCA AAAAGTTGGTGGCAGTTCCAGAATGCCTGGGAAAGCTGAAAGCTCTGGAAGAACTGGTGCTATCTGGTTGCTCAAAGCTC AAGTCTTTTCCTGTTCCCATTGAAAACATGAAATCCTTGCAGATATTGTTGCTCGATGGGACAGTGTTCAGTACCTTAAA AGTGGAAGACGTACCTGAACTAAGACGTGGTATGAACGGCCTATCCTCATTGCAGCGTCTATACTTGAGCGGGAACGATG TGATCAGCAATCTGCATACTGGCATCAGTCAACTAAATCATCTGAAATTGCTTGACCTCAAGGGCTGCAAGAATCTCACA TCCATTCCATTACTTCCGCCAAATCTAGAGATTCTAGATGCATACGGCTGCGAGAAATTGAAAACAGTTGCATCCCCCAT GGCCCAGATTAAGCGTGTGGAGAAGGTTCACTCTAAATTCATTTTCATCAACTGCAACAATCTGGAACAAGCTGCAAAGA ATAGCATCACATCATACGCACAAAAGAAAAGCCAGCTGGATGAGCTTAGATCTTATAAAGAGGGACATGCTTCAGAAGCT TTATTCGTTACTTCTTTTCCAGGGAGTGAAGTCCCTTCTTGGTTTAACCATCGCACAATCGGACCCTCGTTAAAGCTGAC TCCGCCACATTGGTGTGACAACAATCTTTCGACAATAGCTATGTGCGCTGTTGTTGCATTCCCGAAAACTGAAGATAAAA CCAAACGTTTCTCAATAAAGTGCACTTGTGAGTTCAAAAACAAACTTGGGACATGTACACGTTTCAGCTACATTCTTGGT GGAGGTTGGATCCAACCGCGCAAGATTGATTCAGACCATGTGTTTATCGGTTACGCATGTTGTTCCCACGTTAAAAATCA TGTACAGGGTTCGAGAGAACATCAGAAATGTGTTCCTACGGATGCGTCAATCGAATTCGAAGTGATAGATGGTGCAGGTA AGATTATGAATTGTGGTTTAAGTTTGGTATACGAGGAACCAAACCATGTCGTTATTGAAGACAGTAATGGAACTTCTTCC GTTGGAGAGAGTACAGTGTACTCTACTGCTCGCTTTTATTTCATTGTTTTGACGTGTTTTTGTATGTTTTATTTTTTTTG GGTTTTAGGTTTGCTATAA |
| AA seq | Len:1153 aa MASYSSDPSFSSSNSVQSLPPKHQVFINFRGKELRLTFVSHLEKALRRDGINVFVDKNETKGKDLSSLFSRIEESRIALA IFSSMYTESKWCLNELVKINECVHSGKLVVIPIFYKVDTDDVKNRNGTFGAKLWELAKTKPEMLVKWVKALEDVTEKIGY TLGEMSDESESIEKIVKGVTEVLWKIPAAGEDKMTPEAPIAGDEDTPAPLCGIEQRLEQLRTVFDLKWESTRTIGVVGMP GIGKTTLAYKLYEEWQGYFDHHVFLHDVRGIWKGGSMDHRNIFMNELLQSYDPNQEVPDLLPEAVKTLLLSKKSLVVLDN VSDKIQIELLLGDYDWISAGSRIIITTSDLSVIEGIVDDTYEVVRLSGIDSFQYFNYFAFGSKDHTPDDNFMKLSRLFVD YAQGNPFALNRLGVDLYGKNEAHWKDTLRKLEESPTKAIQDFLQISYDGLEQLQKDVFLDIACFFRSADESHVRCLVESC DTESIAGVNEINDLAGKYFINISGGRVEMHDLMYTFGKELGSKGSRSLWNYKGVVDALKKGAVADSVRGVFLDMSELTDK HHLKPYTLSGMRNLRYLKFYNSHCHRECKADGNLNCPGGLELPLEEIRYFYWLKFPLKKLPEDFNPKNLTDLNLPYSEIE ELWEALKDTPKLRWVDLSHSSKLCKLSGLQNAQRLKKLNLEGCTSLQELPQEMKRMKRLIFLNMRGCTSLRVLPPMNLIS LETLILTNCSSLEEFRVISENLETLYLDGTDISQLPEDMVKLERLIVLNLKKCKKLVAVPECLGKLKALEELVLSGCSKL KSFPVPIENMKSLQILLLDGTVFSTLKVEDVPELRRGMNGLSSLQRLYLSGNDVISNLHTGISQLNHLKLLDLKGCKNLT SIPLLPPNLEILDAYGCEKLKTVASPMAQIKRVEKVHSKFIFINCNNLEQAAKNSITSYAQKKSQLDELRSYKEGHASEA LFVTSFPGSEVPSWFNHRTIGPSLKLTPPHWCDNNLSTIAMCAVVAFPKTEDKTKRFSIKCTCEFKNKLGTCTRFSYILG GGWIQPRKIDSDHVFIGYACCSHVKNHVQGSREHQKCVPTDASIEFEVIDGAGKIMNCGLSLVYEEPNHVVIEDSNGTSS VGESTVYSTARFYFIVLTCFCMFYFFWVLGLL* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | - |
| KEGG | hypothetical protein; K16226 disease resistance protein RPS4 (A) |