Names & Information
Knowledge of BnaA08G0176300ZY:
| Gene Name | BnaA08G0176300ZY |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: probable WRKY transcription factor 52 [Brassica rapa] |
| Best Hit (SwissProt) | Probable WRKY transcription factor 16 OS=Arabidopsis thaliana GN=WRKY16 PE=2 SV=1 |
| NT seq | Len:5865 nt ATGGATTCTTCACTTTATCTAATTTGTAGCTGGGTTGCTGCAATCAGTTTCCTCACGATTTTGGCTACGTTGTTGTTTAT GGTTTACAAAAAAAACAGATCCGTAACTGCTTCTTTTTCACCTCCCAATTGGAAACACCAAAGCTACTGCGAACCGAGTC TACAGTTAGTTGAGATGGAACCGAGTCTAGACTCAGATGAAGGGAACATGGACAACTGTGAACCAGAGCAGAGGCTGGAA GCGTTTATTTCACGGTTTAACTCGGAACTTAGGAAACAGAGGCAAGAGCATATCATCACAAACGAAGATTTAAAGGCATC TTCCCAAGGATCATCTAGTGGAGGACTACCCGCGGTCTACATTTATTGCGCAAATACATTACAGTACTCCTTCGCTAGCC ACCTCTCCATGGGTTTCCACAGAAAAGGCATATATGCATCTGCAAATAGCAATGAGACTCTGGATGTGATGGAGGGAGCT AGCGCTTCTGTGGTGGTTTTTTCGAAGAACTACTTGTCCTCCCCCTCATGCCTGGATAAGCTCGTGAGGGTTCTTCAGTG CAGGAGGAAAAGCGGCCAGCTGGTGGTTCCAGTGTTCTATGACGTCAGTCCATCTAATGTGGAGGTGCAGGAGCAAGAGT CAGTTGATCGGATAAGCGCGCTCCAAGAGCTGAGAGAATTCACAGGCTACCAGTTTAGAGAGGGATGCAGTGAGTGCGAA CTCGTGGAAGAGATTGTTAAAGATGTCTATGAAAAACTCCTTCCCGCGGAACAAATAGGAATCAGCTTAAGGCTCCTAGA GATAGAACACTTGCTTTGCAAACAGCCATGGGGTATCCGTCGCTTAGGAATCTGGGGTATGCCCGGCATAGGCAAGACAA CACTTGCTAAAGCAGTTTTTGATCAGATCTCTGGAGGCTATGAAGCTTTTTTTTTCATCAAACACTTTGACAAAGCTTTC AACGAGAAGGGACTTCACTGTTTGTTGGAGGAACATTTTGGGAACATTTTGATGGACTTGCCTCGCGTATGCAGTAGCAT TACAAGACCTAGCTTCCCCGGGGATATATTAAGCAAGAAGAGAACTCTTGTTGTTCTTGATGATGTGCAAAATCCTTTAG TTGCCGAGTCTTTTCTCGCTGGGTTTCATTGGTTTGGTCCGGGAAGCCTAATTATCATAACCTCCAGAGATAAGCAAGTT TTCCGCCATTGTCAAATCAATCACGTGTATGAGGTTCAGAGCTTAAATGAGAATGAGGCTCTGCAGCTATTCTCTCACCA TGCTATTGGAGAAAATATAAGAGAAAAAAAATTCATGAAACTATCAATGGAAGTGATTGACTATGCTAGTGGAAATCCAT TAGCTCTCAGCTATTACGGAAAAGAGCTCAAGGGAAAGAAACTGTCAGAAATGAGGACCACATTCCTCAAACACAAGCTA CGTACGCCATATAAGATTCAAGACTTATTCAAGAGAAGCTATGAAGCACTTAATGACAGCGAGAAGAACATTTTTCTGGA CATTGCTTGTTTTTTCAAGGGAGAAAATGTTGACTATGTGATGCAACTGCTTGAGGGGTGTGGATTTCTACCACATATTG GGATTGATGTTCTTGTGGACAAGTGTCTGGTTACTATTTCAGAAAACAGAGTGAAAATGCATAGAATAATTCAAGACTTC GGCAGAGAAATAATCAACGGAGAAGTAGTACAGATCGAGCGGCGTCGCAGACTATGGGAACCTTGGACCATCAAATTTCT ACTTGAAGATGACAAACTCAAAGCAAACGTCAAATCAACCTATACACGTCTTCTGGGCACTGTAGACATAGAAGGCATAT TTCTAGACGCATCGAACTTAAGCTTTGATGTGAAGTCTGGTGCTTTTAAGGATATGCTAAGCCTTAGATTCCTGAAGATT TATTGTTCTAATTACGAAAAAGATAGTAGAGTCCTCCTTCCCAAAGGACTTGATTCTCTGCCTTATGAGCTTAGACTCCT CCACTGGGAGAACTATCCTTTGAAATCCTTGCCACAAAAATTTGACCCATGCCACCTTGTTGAACTCAATTTGTCTTACA GTCAGCTTCAGAAACTTTGGGGAGGAACCAAGAATCTCAAGATGCTGAAGGTGGTCAGGCTTTGTCATTCCCAGCAGCTA ACTGATATTAACGATCTTTGTAAAGCTCAAGATCTCGAGCTATTAGATCTCCGAGGGTGTACACAACTGCAGAGTTTTCC AGCCATGGGTCAGTTGCGGCTTCTCAGAGTTGTGAACCTTTCAGGTTGCACAGAGATCAGAAGCTTCCCAGAGGTTTCAC CAAATATTAAGGAACTACATCTACAGGGAACTGGTATCAGAGAACTCCCAGTATCCACTGTGACCCTCTCCTCGCAAGTT AAGCTGAACAGAGAGCTTTCCAATCTTCTAACAGAATTCCCGGGAGTTTCAGATGTTATAAACCATGAGCGACTAACAAG CCTGATCAAACCCGTGTCAGCTAATCAACATCTTGGTAAACTTGTTCGCCTGAATATGAAAGATTGTGTTCATTTGACAA GTCTGCCTGACATGGCTGATTTAGAATTACTTCAAGTTCTTGATCTCTCTGGATGCTCAAATCTCAACGATATTCAGGGT TTCCCACGAAACCTGGAAGAATTATATCTTGCTGGGACGGCCATAAAAGAATTTCCACAGCTTCCCTTGAGTCTTGAAAT CTTGAATGCACATGGTTGTGTGTCTCTTATATCAATTCCTATCGGTTTCGAGCAGCTTCCTAGGTACTACACATTCAGTA ACTGTTTTGGTCTTTCGGAAAAAGTGGTCAACGTTTTTGTAAAGAATGCTTTGACTAATGTTGAGCGCCTCGCAAGGGAG TATCATCAACAACAGAAACTCAACAAATCTCTAGCTTTCAGCTTCATTGGGCCTTCACCTGCAGGGGAAAATCTAACATT TGATATGCAACCAGGATCTTCTGTGATTATACAACTGGGCTCTTCTTGGAGAGATACGCTTGGAGTTGCCGTATTAGTAC AAGTTACATTTTCGAAGGATTACTGCGAGGCTAGTGGTGGTTTTAACGTTACTTGTGTTTGCAGATGGAAAGATAAGGAT TATGTCTCTCATAAGCGAGAAAAAGACTTCCATTGTTGGCCTCCAGAGGAAGAAGGTGTTTCAAAGGACCACACGTTCGT CTTCTGTGATCTCGATATTCATCCTGGTGCCTGTGAAGAAAATGATACCGGCATATTAGCTGACCTTGTCGTATTTGAGT TCTTTACTGTGAACAAGCAGAAGAAGCTATTAGATGAGAGTTGTACAGTGACGAAATGTGGAGTATATGTGATAACTGCT GCAGATCGAGATACAAGCCCTAACATGACTCCATCATTTGATTACCTGCAGGAGCTTTCTGATAATGATGCTCGAAACGT ATATGATGGCTTAGACGAGGATGAAAGAACTTTATTTCTTTACATTGCGTGTCTGTTCAATGATGAGGAAGCTTATTTGT TGGCACCACTTAGCAATGGCTTGGAAATTAGTTCTGGGATCAAGATCTTAACCGATAAGTCTCTCATACATATATCTCCA TACGGTGTTTTAGTACGAGAAGGCTTACTTCAGAAAATAGGTATGGAGATGATCAATAGACGGAGACAGGCGCAAGCTTT GACCAATTTAGCAGATATAGCCGGAGTGGATTCTCGGAAGTGGGATAATAACGCTAACATGATAGAGAACTTGCCTCACT CCTTCAAGATGCACTCTTCAATGTGCTTAGCCTTGAAGAAATTAGTTGATAGAGTCATGAAAATATTTCCTGAAATAGAA GCTGCTAGACCCGGATCTTCCACAGCGATACAGCCTCTCAACGAAGCTTTGGAGAAAGCTAAGCTGCTTCTTCAATACTG CAGTGAATCCAGTAAACTCTACATGGCAGTAACAGGAGATGATATACTCACAAGAGGTTCTAGATCCAAAAAGTTATTAG AACAAAGCTTAGCTGACATCAGAACCATGGTTCCTACTGCTTTGGCTATCCAGATACTTGAGGTTCTCCAGGATCTTAAG TCAACAGAGTTGTCTCTAGAATCATCTGAAGAAGAAGCTGGGAAAGATATTAGGGAACTGATGCGACAAAGCACATCTTC TTCTGTGTCTTCTGATGAGATCAGAGATTTCCACTTTGCAGCCCTAAAGCTCCAGCTCTCAACACCTGAAGCCGTTGCGG TAGAGAGAAGGTCCTTAAAGTCGCTTTATGGGAAGCTAGGCGAGTGTGAAGGGAACAAGAGACAGATTCTGAAGTATCTC CTCTGCCTCCTGAAGAAGCATGAGAAAATCATATGGAGAGATCACAAAGATAACTCTCTCACACTGCATCAGTCTTCGAA TGATTCTGTGTGTGCTGGTGTTGCAGATGCCGGGTGTTCTGAGGAATACAATGCAACACTTCCCGAGCATTTCAAATGCC CTCTTTCTCTTACCGTGATGTATGATCCTGTCATCATTTCTTCGGGCCACACGTTTGAGAGGATGTCGATTCAGAAATGG TTTGAATGTAATGATTCATGTCCTGTATCGAAAAGGATACTGGATGATTTCACATTGCAGTCCAACGTAGCAATGAAGGA TCAGATATCAAAATGGTGCTCCAAGAAGGGTCTTGATGTTCAAGATCCAGCAATGAAGCACGTAAACGCTTCACATAATC TTGACTTCTCCATTCCTAGTTTTTCAAGTCCTCTGTACAATATCTCAGACCTCAGCTGTTTCAGGAGTAGTGACATCAGT TCTAGCTTCTCCACTGAATCAGAAACAGAAATCAGAGATTCTACTCACAGCGAGTGGGAGATAGAACCCTTATGTGAACT CAGTAAGCTTCCATGGAATGCGCAGGTCAAGGTTGTTCAAGATGTAAGAAGTCTTTTTGAGCAAGATTCTAAGGCTGCTC GGTCTATGTCGCCGAGTAAATTTATTGAGCCACTTGTCACATTCTTGAAGAATGCTCATGAAAGAAATGGCACTGACGTA GTAAAGGATGGATTGGAGTTATTATTGACTTTCCTCAGTGGAAACCGAAGGGCTATAGACTCTCTGGGAGAAGAAGTATT TGAAATGTTGTGTGTCTTTCTCGGGTCTGAGTTAGTAGCTGAAGAAACTCTAAACGTACTCGAGGTTCTCTCTAACCACC CACACAGTCTCTCCAAGATAACTTCAACAGGCTCTCTCTCTTGCCTTTTGAAGATCGCTGAGTCTGGAGCAGAAAATCTT CAAGAACAAGCAATGATCACACTCAAGAAGCTGTGTTCAAGCAATGAGATTTGTCTGGAAATGGTCTCTCTCGGTTTTGT CCAGAAGTTAACATCTTTCTTGCAACAAAACGTCTTCAGCAAACACTCAATCATCATGCTGAAGAATCTCTGCAACACGG AGAAAGGTCGGGTTTGTGTAACCGAAACCCCGGGTTGTTTAGCTTCAATATCTGATTTATTGGACTCAAATGTTTCCGAG GAGGTAGAGAATGCAATCTCCATTCTCCTCCAGCTCTGTGTGGAGAAGATAGAGTATTGCTATCTTGTGGTGAGAGAAGG CCTTAATATCTACTCATCTCTTCTCTTGATATCCAACAACGGAACCGAGGAAGCGAAGGTGGGTGCATCTGAATTGCTTA GAGCTCTTGAAGAAGTAGAAGAAGTAGAAGAAGAAGAAGAATCCTCCACACCACAAGAAGAAGCAACTACTTCACAGGTT GTTACTCATCAGGAACCTATAACAAAACCATCTCCAAAGAATTCTGGTCTTTTTGGACTCAGTTTCTCCATTTCCAAGAA GAAGAAGAAGAAGATAAAACTATAA |
| AA seq | Len:1955 aa MDSSLYLICSWVAAISFLTILATLLFMVYKKNRSVTASFSPPNWKHQSYCEPSLQLVEMEPSLDSDEGNMDNCEPEQRLE AFISRFNSELRKQRQEHIITNEDLKASSQGSSSGGLPAVYIYCANTLQYSFASHLSMGFHRKGIYASANSNETLDVMEGA SASVVVFSKNYLSSPSCLDKLVRVLQCRRKSGQLVVPVFYDVSPSNVEVQEQESVDRISALQELREFTGYQFREGCSECE LVEEIVKDVYEKLLPAEQIGISLRLLEIEHLLCKQPWGIRRLGIWGMPGIGKTTLAKAVFDQISGGYEAFFFIKHFDKAF NEKGLHCLLEEHFGNILMDLPRVCSSITRPSFPGDILSKKRTLVVLDDVQNPLVAESFLAGFHWFGPGSLIIITSRDKQV FRHCQINHVYEVQSLNENEALQLFSHHAIGENIREKKFMKLSMEVIDYASGNPLALSYYGKELKGKKLSEMRTTFLKHKL RTPYKIQDLFKRSYEALNDSEKNIFLDIACFFKGENVDYVMQLLEGCGFLPHIGIDVLVDKCLVTISENRVKMHRIIQDF GREIINGEVVQIERRRRLWEPWTIKFLLEDDKLKANVKSTYTRLLGTVDIEGIFLDASNLSFDVKSGAFKDMLSLRFLKI YCSNYEKDSRVLLPKGLDSLPYELRLLHWENYPLKSLPQKFDPCHLVELNLSYSQLQKLWGGTKNLKMLKVVRLCHSQQL TDINDLCKAQDLELLDLRGCTQLQSFPAMGQLRLLRVVNLSGCTEIRSFPEVSPNIKELHLQGTGIRELPVSTVTLSSQV KLNRELSNLLTEFPGVSDVINHERLTSLIKPVSANQHLGKLVRLNMKDCVHLTSLPDMADLELLQVLDLSGCSNLNDIQG FPRNLEELYLAGTAIKEFPQLPLSLEILNAHGCVSLISIPIGFEQLPRYYTFSNCFGLSEKVVNVFVKNALTNVERLARE YHQQQKLNKSLAFSFIGPSPAGENLTFDMQPGSSVIIQLGSSWRDTLGVAVLVQVTFSKDYCEASGGFNVTCVCRWKDKD YVSHKREKDFHCWPPEEEGVSKDHTFVFCDLDIHPGACEENDTGILADLVVFEFFTVNKQKKLLDESCTVTKCGVYVITA ADRDTSPNMTPSFDYLQELSDNDARNVYDGLDEDERTLFLYIACLFNDEEAYLLAPLSNGLEISSGIKILTDKSLIHISP YGVLVREGLLQKIGMEMINRRRQAQALTNLADIAGVDSRKWDNNANMIENLPHSFKMHSSMCLALKKLVDRVMKIFPEIE AARPGSSTAIQPLNEALEKAKLLLQYCSESSKLYMAVTGDDILTRGSRSKKLLEQSLADIRTMVPTALAIQILEVLQDLK STELSLESSEEEAGKDIRELMRQSTSSSVSSDEIRDFHFAALKLQLSTPEAVAVERRSLKSLYGKLGECEGNKRQILKYL LCLLKKHEKIIWRDHKDNSLTLHQSSNDSVCAGVADAGCSEEYNATLPEHFKCPLSLTVMYDPVIISSGHTFERMSIQKW FECNDSCPVSKRILDDFTLQSNVAMKDQISKWCSKKGLDVQDPAMKHVNASHNLDFSIPSFSSPLYNISDLSCFRSSDIS SSFSTESETEIRDSTHSEWEIEPLCELSKLPWNAQVKVVQDVRSLFEQDSKAARSMSPSKFIEPLVTFLKNAHERNGTDV VKDGLELLLTFLSGNRRAIDSLGEEVFEMLCVFLGSELVAEETLNVLEVLSNHPHSLSKITSTGSLSCLLKIAESGAENL QEQAMITLKKLCSSNEICLEMVSLGFVQKLTSFLQQNVFSKHSIIMLKNLCNTEKGRVCVTETPGCLASISDLLDSNVSE EVENAISILLQLCVEKIEYCYLVVREGLNIYSSLLLISNNGTEEAKVGASELLRALEEVEEVEEEEESSTPQEEATTSQV VTHQEPITKPSPKNSGLFGLSFSISKKKKKKIKL* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0000151 |
| Pfam | Leucine Rich Repeat |
| KEGG | hypothetical protein; K16225 probable WRKY transcription factor 52 (A) |