Names & Information
Knowledge of BnaA08G0180000QU:
| Gene Name | BnaA08G0180000QU |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: putative disease resistance protein At4g11170 [Brassica rapa] |
| Best Hit (SwissProt) | Probable disease resistance protein RPP1 OS=Arabidopsis thaliana GN=RPP1 PE=2 SV=1 |
| NT seq | Len:2952 nt ATGAAATCAAGATCCCATCAAAGAAACCAAACAGCTGCTTCGTCTTTAACTCTTTTGGCTCCTCCGTCTTCTTTGCCACA CAACTCGAAGCACCATGTCTTCCCGAGCTTCCACGGGGCAGATGTACGCAAAACCTTCCTTAGCCACGTTCTCAAGGAGT TCAGGAGCAAAGGAATCGACCTATTCATTGACAAAGATATAGAGAGAAGTAAGTCAATCGGTCCTGCCCTTATAGAAGCT ATTAGAGGATCGAGGATTGCTATTGTCTTGCTCTCGGAGAACTATGCTTCGTCTACATGGTGCTTGAACGAGCTGGTGGA GATCATCAAGTGCAGACAAGAGTTTGGTCAAACAGTTATGCCCATTTTCTATCAAGTGAATCCAACTGATATAAAGAAGC AGAAGGGATATTTTGGGAAGGTCTTCAGAAAAACTTGTAAAGGAAAAAGAAAGGAGGAGATCCAAAGATGGAAACATGCT TTAACCCAAGTGGCTCAAATCGAAGGACTAATGATCATCCCCTTGTCCAGGGAAACTGAAGCAGAAATGATTGACGATAT TGCCACTGATGTTTCAAACAAGTTGAACAATTCTGCACCGTCAAGTGACTTCGACGGCTTAGTTGGGATAGAATCTCATA TGACAAAAATGGGACCATTGTTACAACTAGATTCGGACGAGGTGAGAAAAATAGGGATATTGGGCCCACCTGGGATTGGT AAGACCACCATCGCTAGATGTCTATTCAACCAACACTCGCGAGATTTTCAATTGAGTGTCTTTATGGATAATATCAAAAG AAAGTATGTGAGACTAGCTTGTTCCGATGACTACAATGTGAAGTTGGATTTGCAGAAGCAGTTTATGTCTCAGCTAACCA ATGAACCGTGTATCAGGATTCCACATTTGGGAGTTGCCAAAGACAGGTTGAAAGACAAGAAAGTTCTTGTCGTCCTTGAT GATGTGGATCATTTAGTACAACTGGAAGCCATGGCGAATGAAACTAGTTGGTTTGGTCCGGGAAGTCGAATTATCATCAC AACACAAGATCAAAAGGTTTTAAACGCAAGTGGGATCGACCATATATACAGGGTGGATTTACCATCATATGATGAGGCTC TTCAGATATTCTGCATGTATGCTTTTGGGCATAACTACCCCAAGGATGGTTTTGAGACGCTTGCTTGTCAAGTTAGAAAT CTTGTAGGTAGACTTCCGTTGGGGCTAAGGGTTATGGGCTCCTATTTTCGGGGAATGTCTGAGCAAAATTGGACAGAAGC CCTGCCAAGGTTAAGGTCTCACCTTGACAGAGATGGAGAAATTGCTAACATTTTAAAGTTTAGTTATGATGCTTTGTGTA GTGAAGATAAAAGTTTATTTCTTCATGTAGCATGCCTTTTCGATTATGATGAAGTTGATACAGTGGAAGCTTGTCTAGCA AGTTGTTTTTTGAATGTGAAACAAGGGCTTCGTGTCTTAGCTGAAAAATCTCTTATATCTATCGAATCAAGATGGATAAA GATGTCTGAGTTGCTAGTCCAACTAGGAAGAAAAATTGTGCGAGAACAATATGTTAGCGAGCCTTGGAAACGCCAGTTTT TGAATGAAGCAATTGATATTGGTGAAGTACTTAGTGATGATAAAGCACCGCTCAGCAATCTCAAGTGGATGGATTTGACA AATTCAAGCAATTTGAAAGAGCTTCCTAATCTCTCAACGGCCACTAATCTCCAAGAATTGGATCTCAGCTATTGTTCAAG GCTGGAAGAGCTTCCTGATCTCTCAACTGCCACTAATCTCCAAAAATTGGAACTCAGACATTGCTCAAGTCTGGTTGAGC TCCCTTACTCTATTGGGAATGCAGTTAATCTCAGAGAATTGGATCTCAATAATTGCTCAAGTCTGGTGAAGCTCCCTTCC TCTATTGGGAATGCAGTTAATCTCAAAGAAATGAATCTCAGTCATTGCTCAAATCTGGTGGAGATCCCTTCTTCTATTGG GAATGCAGTTAATCTCAGAGAATTGGATCTCAATAATTGCTCAAGTCTGGTGAAGCTCCCTTCCTCTATTGGGAATGCAG TTAATCTCAAAGAAATGAATCTCAGTCATTGTTCAAGTCTGGTGGAGCTCCCTTCATCTATGAGAAACCTTGGTAGATTG TCGGAATTGAAATTAAAGGAATGCTCGAAGTTAGAGGTTGTTCTGACCAACATCAACTTGGAATCTCTGAAAGAACTCAA TCTCTCAGGTTGCTCATTGTTAAAGATTTATCATGAGAGTTCCACGGACATTCAGGAGCTTGATCCATGGCTTTGGAGAA AATCTTGTCTACAGTTTCTTGCACTAAGAGGAATGAAGAAGCTGGTATCGCTCCTACCGCTTCCGGATTCGCTATTGGAA CTCGATGCAGAAGATTGCGAGTCCCTGGAGAGACTAGATTGCTTGTTTCCCAATCCAAATATTCGTCTCAATTTCCTTAA CTGCTTCAAACTGAATCAAGAAGCAAGAGATCTCATCATCCGGACGCCAACTAATCAATATGCGGTCTTTCCCGCTGGAG AAGTGCCTATGTGCTTCACTTACCGATCTTATGGGAGTTCTGTAACTGTGAATTTGAATCAAAATCCTCTTGGGACATCA ACCAAATTCAAGGCTTGTTTCATTTGTGCTGTTGAGGACGAAGAGGACTTTCAAAATTCGGAATCTGTCTTTTGTAGCAT CACTTCCGGAGGGATTGCTCTCACTGCTTTTTTCAAAATATTACATAGATTTTCGCCGGGGCATCTGTACACATTCGATG TTGAGGTTGAAACAGAGGAGGTCACTTCCACCGAGCTTGTTTTTGAGTTCGACCTTGGCTATTCAGATACGAACGTAAAG ATAAAAGAATGCGGGATATTCCAACTTCTGGAGGTCCCTCTATTGAGCTTCAGAGATGGCGATGAGGATTAG |
| AA seq | Len:984 aa MKSRSHQRNQTAASSLTLLAPPSSLPHNSKHHVFPSFHGADVRKTFLSHVLKEFRSKGIDLFIDKDIERSKSIGPALIEA IRGSRIAIVLLSENYASSTWCLNELVEIIKCRQEFGQTVMPIFYQVNPTDIKKQKGYFGKVFRKTCKGKRKEEIQRWKHA LTQVAQIEGLMIIPLSRETEAEMIDDIATDVSNKLNNSAPSSDFDGLVGIESHMTKMGPLLQLDSDEVRKIGILGPPGIG KTTIARCLFNQHSRDFQLSVFMDNIKRKYVRLACSDDYNVKLDLQKQFMSQLTNEPCIRIPHLGVAKDRLKDKKVLVVLD DVDHLVQLEAMANETSWFGPGSRIIITTQDQKVLNASGIDHIYRVDLPSYDEALQIFCMYAFGHNYPKDGFETLACQVRN LVGRLPLGLRVMGSYFRGMSEQNWTEALPRLRSHLDRDGEIANILKFSYDALCSEDKSLFLHVACLFDYDEVDTVEACLA SCFLNVKQGLRVLAEKSLISIESRWIKMSELLVQLGRKIVREQYVSEPWKRQFLNEAIDIGEVLSDDKAPLSNLKWMDLT NSSNLKELPNLSTATNLQELDLSYCSRLEELPDLSTATNLQKLELRHCSSLVELPYSIGNAVNLRELDLNNCSSLVKLPS SIGNAVNLKEMNLSHCSNLVEIPSSIGNAVNLRELDLNNCSSLVKLPSSIGNAVNLKEMNLSHCSSLVELPSSMRNLGRL SELKLKECSKLEVVLTNINLESLKELNLSGCSLLKIYHESSTDIQELDPWLWRKSCLQFLALRGMKKLVSLLPLPDSLLE LDAEDCESLERLDCLFPNPNIRLNFLNCFKLNQEARDLIIRTPTNQYAVFPAGEVPMCFTYRSYGSSVTVNLNQNPLGTS TKFKACFICAVEDEEDFQNSESVFCSITSGGIALTAFFKILHRFSPGHLYTFDVEVETEEVTSTELVFEFDLGYSDTNVK IKECGIFQLLEVPLLSFRDGDED* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0000166 |
| Pfam | - |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |