Names & Information
Knowledge of BnaA08G0182000ZS:
| Gene Name | BnaA08G0182000ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: putative disease resistance protein At4g11170 isoform X1 [Brassica rapa] |
| Best Hit (SwissProt) | Disease resistance-like protein CSA1 OS=Arabidopsis thaliana GN=CSA1 PE=3 SV=1 |
| NT seq | Len:3513 nt ATGTTGACGGTGGCCTCCTCTTCTTCCTCGGTCCAATCACCACCGCAGAATCAAGTCTTCTTAAACTTTCGAGGGAAACA GTTGCGATACGGCTTCGTCAGCCATCTGGAGAAGGCGTTGAGAAGAGATGGGATCAACGTCTTTGTCGACAAAAACGAAA CCAAAGGCAAAGATCTCAGCAGCCTCTTTTCCAGAATCGAAGAATCGAGGATCGCGCTAGCCATCTTCTCGAGCATGTAT ACGGAATCAAAGTGGTGCTTGAACGAGCTGGAGAAGATCAAGGAGTGCGTTGACTTGGGAAAACTCGTGGTCATCCCCAT CTTCTACAAGGTGGACACAGACGATGTCAAAAATCTGAATGGAGTGTTCGGTGACAAGTTTTGGGAATTGGCTAAGACTT GTAATGGTGAAAAGTTCGAAAAGTGGAGACAAGCTTTACAGAATATTCCACAAAAACTAGGATTCACGTTAGGCGAAACC AGCGATGAAGGCGACTACATCAATCAAATTGTAGGGGAAGTCATAAAGGTGTTATCTTCTGATCTGGAAAGACAAATCCC CATTGATAATCATCCTTGTTCAGGAGCAGAGAAAACCCCTGAAGCTGCACCTGACTTGCCCCCTCCTCTGTTTGGCATCG AAAATCGTCTCACGCAATTGGAAATGAAGTTAGATTTTGAGTGCGAGAGTACTGTTACGATTGGTGTTGTTGGTATGCCT GGGATTGGTAAGACCACACTGACAAAGATGTTGTATGAAAAGTGGCGAGGCGAGTTCCTACGCTGTGTTTTCCTTCATGA TGTCCGTAAATTGTGGAAAGACTGCAAGATGAATCGGGACATTTTCATGAGAGAGTTGTTGAAGGATGATGACGTGAAAC AAGAAGTCTCTGACCTGTCACCTGAATCCTTGAAGGCTCTCCTACTCAGTAAGAAGTCTCTTGTTGTTCTTGATAACGTG AGTGACAAGAGTCAGATAGAGACTCTTCTCGGCGAATGCGACTGGATTAAGAGAGGTAGCAGGATCTTTATCACCACTAG CGATAAGTCAGTGATCGAAGGGGTGGTTGATGACACGTATGAGGTCCTGAGACTATCTGGCAGAGACAGCTTTCAGTACT TCAGCTATTTTGCGTTTAGTGGTAAGCTCTGTCCTCCGGAGGATAACTTTTTGAATCTCTCTAGATTGTTTGTGGACTAT GCCAAAGGCAATCCATTAGCTCTCAAGATATTGGGTGTTGAGCTTAGTGAGAAAGACGAGACTCACTGGGAAGAGACACT TCGCGATCTGGCACAGAGTCCCAATAAGACTATACAAAGTGTCTTGCAGATAAGCTACAATGGACTCGGTCAGTTTCATA AAGATGTGTTTCTTGACGTAGCTTGTTTCTTTAGATCAGGGGATGAGAATTACGTGAGGTGTTTGGTGGAGTCATGTGAC ACTGATCTTGTTGATGCTGCGAGTGAGATAAAGGATCTTGCCAGTAAATTTTTGATAAACATTTCTGGCGGACGAGTGGA GATGCATGATTTACTGTATACATTTGGCAAGGAACTTGGTTCACAAGGTTCGCGGAGGCTGTGGAACCATAAAGGCGTTG TTGGTGCGTTGAAGAAAAGAAAAGGAGCAGGCAGTGTGCGGGGCATTTTTCTTGACATGTCTGAACTGAAGGAGAAGCTT CCTCTGGACAGATGTACTTTCACTGAGATGCGTAATCTTAGGTACCTCAAATTCTATAGTTCTCGTTGTCATAGAGAATG CGAAGCTGACTGCAAACTAAACTTCCCTGAGGGACTTGATTTTCCCTTGGATGAAGTAAGATATCTCTTTTGGCTGAAGT TCCCTTTGAAGAAACTTCCGAAAGACTTCAACCCCAAGAATCTAACCGACCTTAACATGTCTTTCAGCGAGATTGAAGAG CTCTGGGAGGGTGTTAAGGATACACCGAAGTTAAAGTGGGTTGATCTTAGCCACTCAAGCAAGTTATGCAATCTGACAGG GTTGCTAAATGCTGAAAGCCTCCAGAGATTGAATCTCGAAGGGTGCACGAGTTTGGAGGAGTTGCCTCGTGAGATGGAAC GTATGAAATGTCTTGTTTTCCTCAACATGAGAGGATGCACGAGTCTCCGGGTTCTTCCGCATATGAATCTGATCTCTATG AAAACTCTCATCCTCACCAACTGCTCAAGCCTTCAGACATTCCGGGTGGTTTCGGATAATCTAGAGACCCTACACTTGGA TGGATCTGCAATTGGTCAACTTCCTACAAACATGTGGAAGCTCCAGAGACTGATTGTATTGAACTTGAAAGACTGCAAAA TGTTGGTAGAACTTCCAGAATGCCTTGGGAAGCTGAAAGCTCTGCAAGAACTGGTGCTATCTGGTTGTTCAAAGCTCAAG ACTTTTCCAATTCGCATTGAAAACATGAAATCTTTGCAGATTTTATTGCTTGATGGGACATCAATTACAGACATGCCGAA GATATTGCAGTTGAATAGCTCAAAAGTGGAAGACTGGCCTGAACTAAGACGTGGTATGAACGGCATATCCTCATTGCAGC GTCTATGCTTAAGCGGGAATGATATAATCACCAACTTGCGAATCGACATCAGTCTACTATGTCATCTGAAACTGCTTGAC CTGAAATTCTGCAAGAATCTCACTTCAATTCCACTGCTTCCACCAAATCTAGAGATCTTAGATGCACATGGCTGTGGCAA ACTGAAGACAGTCGCAACGCCGATGGCCATTCTTAAGCATATGGAGAAGGTTCACTCTAAGTTCATTTTCACCAACTGCA ACAGTCTTGAACAAGCTGCAAAGAATAGCATCACAACGTATGCTCAAAAGAAAAGCCAGCTAGATGCGCTTAGATGTTAT AAAGAGGGACATGCTTCAGAAGCTTTATTCATTACTTCCTTTCCAGGGAGTGAAGTACCTTCATGGTTTGACCATCGCAT GATTGGATCAACATTAAAGCTGAAGTTTCCACCACATTGGTGTGACAACAGACTTTCAACAATAGTTCTATGCGCTGTTG TTGCATTCCAAAATGAGATCAACAGTTTCTCAATAGAATGCACTTGTGAGTTCAAAAACGAACTTGGAACATGTACACGT TTCAGCAGCATTCTTGGTGGAGGTTGGATTGAACCACGCAAGATTGATTCAGACCATGTGTTTATCGGTTACACCAGTTC CTCCCACATAACAAATCATGTAGAAGGTTCGCCAGAACATCAAAAATGTGTTCCTACCGAGGCGTCAATAAAATTCAAAG TGATAGATGGAGCAGGTGAGATTGTGAATTGTGGTTTAAGTTTGGTGTACGAGGAACCAAACCATGTAGTTATCGAAGGA GATTGTAGTGGAACTTCCTCGGGAAGAGGTTTATCAGTTGTAGAGAGTACAATGAGCTTTGCTACTCGGTTCCTCTCTGT TATTTTGAGGTATTTGTGGCTAGGTGTTGTATTCTTTTCGGTTTTTGGGTTTGCTAGATTTTATTTTCACTAG |
| AA seq | Len:1171 aa MLTVASSSSSVQSPPQNQVFLNFRGKQLRYGFVSHLEKALRRDGINVFVDKNETKGKDLSSLFSRIEESRIALAIFSSMY TESKWCLNELEKIKECVDLGKLVVIPIFYKVDTDDVKNLNGVFGDKFWELAKTCNGEKFEKWRQALQNIPQKLGFTLGET SDEGDYINQIVGEVIKVLSSDLERQIPIDNHPCSGAEKTPEAAPDLPPPLFGIENRLTQLEMKLDFECESTVTIGVVGMP GIGKTTLTKMLYEKWRGEFLRCVFLHDVRKLWKDCKMNRDIFMRELLKDDDVKQEVSDLSPESLKALLLSKKSLVVLDNV SDKSQIETLLGECDWIKRGSRIFITTSDKSVIEGVVDDTYEVLRLSGRDSFQYFSYFAFSGKLCPPEDNFLNLSRLFVDY AKGNPLALKILGVELSEKDETHWEETLRDLAQSPNKTIQSVLQISYNGLGQFHKDVFLDVACFFRSGDENYVRCLVESCD TDLVDAASEIKDLASKFLINISGGRVEMHDLLYTFGKELGSQGSRRLWNHKGVVGALKKRKGAGSVRGIFLDMSELKEKL PLDRCTFTEMRNLRYLKFYSSRCHRECEADCKLNFPEGLDFPLDEVRYLFWLKFPLKKLPKDFNPKNLTDLNMSFSEIEE LWEGVKDTPKLKWVDLSHSSKLCNLTGLLNAESLQRLNLEGCTSLEELPREMERMKCLVFLNMRGCTSLRVLPHMNLISM KTLILTNCSSLQTFRVVSDNLETLHLDGSAIGQLPTNMWKLQRLIVLNLKDCKMLVELPECLGKLKALQELVLSGCSKLK TFPIRIENMKSLQILLLDGTSITDMPKILQLNSSKVEDWPELRRGMNGISSLQRLCLSGNDIITNLRIDISLLCHLKLLD LKFCKNLTSIPLLPPNLEILDAHGCGKLKTVATPMAILKHMEKVHSKFIFTNCNSLEQAAKNSITTYAQKKSQLDALRCY KEGHASEALFITSFPGSEVPSWFDHRMIGSTLKLKFPPHWCDNRLSTIVLCAVVAFQNEINSFSIECTCEFKNELGTCTR FSSILGGGWIEPRKIDSDHVFIGYTSSSHITNHVEGSPEHQKCVPTEASIKFKVIDGAGEIVNCGLSLVYEEPNHVVIEG DCSGTSSGRGLSVVESTMSFATRFLSVILRYLWLGVVFFSVFGFARFYFH* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | hypothetical protein; K16226 disease resistance protein RPS4 (A) |