Names & Information
Knowledge of BnaA08G0201700NO:
| Gene Name | BnaA08G0201700NO |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaA08g20170D [Brassica napus] |
| Best Hit (SwissProt) | Protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1 OS=Arabidopsis thaliana GN=SNC1 PE=1 SV=3 |
| NT seq | Len:3549 nt ATGATGGATCTTGTGGACGTTAAATCCACTGGTGACGTTCAAGTCCTGGGACTTCACGGTATGGGTGGTATTGGGAAGAC TACACTTGCTAAACGCTTCTATAACAAGATCCTGGAGAACTTTGAGGACCACCGATGTTTCATCTCTAACGTTAGACAAG AATCATCAGACGGCTTGCTCAATCTACAGAAGACTTTCATCAAGTCACTATTCGGTTCGGTGCCTGAAATAGAAGATGTT AACAGTGGCCGGGACAAGATAAGAGGGAGAGTTCGTGAGAAGAAGATTCTTGCGGTTTTAGATGATGTTGATAATGTAGA CCAGGTTGATGCGCTGGTTGGTGAAAGAAGTTGGTATGGTAAAGGAAGTGTTATCATCATTACAACCAGAGATGAAGAGA TTCTGAGTAAGCTCTCTGTGAGCCAAAAGTATGAGGTTAACTGCTTGACTGAGGTGCAGGCCTTGAAGCTGTTTAGTTTT CATTCACTACGGAAAGAAAAACCAACAGAGAAGCTGTTGGAGTTGTCAAAGAAGATTGTCAGGATAACGGGGAAGTTGCC ACTTGCTGTTGAAGTGTTTGGTTCCCATATGTACGACAAGAAGGAAGATGAGTGGCTAACTGAACTAGAGAAGCTGGAAA ATACCCAACCAGGCGATCTCCAAAGTGTTCTGGCGCTGAGTTTCGAATCCTTGGGAGATGAAGAGAAGACAGTCTTCCTT GACATTGCCTGTCTCTTCCTTAAAATGGAGATAACGAAAGAAGAAGTCATGGACGTACTGAAAGGTTGTGGGCTTAACGC TGAGGCTGCTCTCACTGTCCTCAGACAGAAGTCTCTTGTTAAGTTATTGTCAGACAAAGACAATACTCTTTGGATGCATG ATCAGATCAGAGACATGGGAATGCAGATGGTCCTTAATGAAAGCCGTGAGGATCCTGAAATGCGAAGTAGACTCTGGGAT CGTGGTGAAATCATGAATGTATTAAACTATGTGAAGGGAACAACATCCATCCGAGGAATTGTATTAGACTTCAAAAAGAA GTTTGTGAGTCATTCAACTGCAGTTGAAATAGGGTCGAGCAATCTACAAAACAATCAAGGCATCAGCTCTGCGGTTAGCT ACGTGAAGAATATGTTTGTAAAGTTTCCAGAAGAGGAGAAGCCTAAAACTTCTGAAATAACCATCCCCATAGAGCCTTTT GCACCAATGAAGAAGCTGAGACTTCTTCAGATCAATCATGTGGAGCTTGAAGGAGATCTTAAGCTTCTCCCATCTGAACT CAAGTGGATACAATGGAGAGATTGCCCATTAAAAGACGTTCCACCGGTTTTTCTTTCTGGGCAACTTTCTGTTCTTGATC TTTCAGAGAGTGGAATAAGAAGAGTCCAGACTTTATGGTTCAAGAAGGAGGATGAGAACTTGAAGGTTGTAAATATGCGC GGCTGCCACAGCTTAGAAGCCATTCCTGATTTGTCAAACCACAAGGCCTTAGAGAAGCTTGTTTTCGAGAGATGCAAGCT TCTGGTGAAGGTTCCTAGTTCAGTTGGTAATCTAAGCAAATTGCTTCACCTGGACTTCAGTTACTGTACAAATCTTACTG AGTTTCTTGTGGATGTTTCTAGACTGAAGCATCTTGAAAAACTCTTCCTCTCTGGCTGTTCAAATCTGAGTGTGTTGCCA GAAAACATCGGTGACATGACACGCTTGAAAGAGCTTCTTCTTGATGGAACTGCGATAAAGAACTTACCAGAATCTATTGG TGGTCTTGAAAATCTTGAAAAGCTTAGTCTATTTGGCTGCAGATCTATTCAAGAGCTACCTGATGACCTGGATGCATTGA CATCACTGGAGGAGCTAGATCTTAGTGATACTGCACTGAAAACCCTTCCAAGCTCTATTGGAGGACTAATAAATCTCAAG AAGCTGCATTTGATGCACTGCACATCCCTTACTAAGATTCCTGACACTATCAACAAGCTAATATCATTGAAGGAGTTTTT CATCAATGGAAGTGGAGTGGAGGAGCTGCCTCTAAACCTTGGACCACTACAATCTTTGACTGAATTTTCAGCTGGAGGAT GCAAATCACTGAAGCAGGTTCCGAGTTCCATTGGTATGTTAAATAATCTCTTCCAACTTGAGTTGGATCACACTCCAATA GTAACTCTACCAGAAGAGACCGGTGACCTGCGCTTTATTCAGAAACTTGAACTGAGGAACTGCAAGTCCCTCAAGTTTCT GCCTAAATCAATAGGAGGTATGGACACACTCCAAAGCTTATACCTTACAGGCTCTGACATTGAAGAACTGCCTGAAGAAT TCGGAAAACTCGAAAAACTAGTACTACTCCAAATGAACAAGTGTAAGAAGCTCAAGAGGCTTCCTAACTCATTTGGAGAC TTGAAGTCTCTTTATCATCTGTACATGGAGGAAACTTCGGTGGTGGAGTTGCCAGAAAGTTTTGGAAACCTCTCTAAACT AATGACATTGAAAATGCTGAAGAGACCTCTCTTTAGAAGTGATACTCAAGGTAGTACAAAGAGTTTTGTAATACCAGACT CTTTCTCAAATCTCGAGTCCCTTGAGGAAGTTGATGCTCGTAGTTGGGGAGTCACTGGTAAAATCCCTGATGTTTTTGAG AAGCTTACATCTGTGAAGATACTCAACCTTGGGAATAATTATTTCCACAGTCTTCCTTCTAGCCTCAAGAAGTTAACAAA TCTCAAAGAGCTTATATTGTATGACTGCCAAGAGCTCACCTGTCTTCCTCCTCTTCCATGTAACTTGGAGAAGCTTAACT TAGCAGACTGCTTGTCATTGGAGAGTGTATCCAACCTTTCGGAGCTGACGATGTTGCAAGAACTCAACCTCACAAACTGT AAGAAAGTGAATGATATTCCAGGACTAAAGCAGTTGAAGGCTCTAAAACGGTTATACATGAGCGGCTGTAACTCCGATTG CTCCGCTTATGTAAAGAAAACACTTTCCGAGTCCAAGGTTTCTTTGAAAATGCTGAGGAATTTGAGCGTGCCTGGGAACA GAATCCCAGACTGGTTCTCGCAAGGACCTGTCAGGTATATAGCTCAGCCGAACCGAGAGCTGAGAGGCGTAATCATTGCT GTTGTTGTGACTGTTAACCAAGAAAGCAAAGATGACTTCCATGTCCCTGATGTGTTGGGGATTCAAGCCCAAATTCTAAA ACTTGATAAAGTCTTGGTCAACCACACGTTGAACCTCACTGGAGTGCCGAGGACAAGTGATGATCAGCTTCACATCTGCC GGTACTCGCAGCACTACCCAATGGTTTCGATGTTGAAAGAAGGGTACACCATACAGGTGATCAAACAGAAGATGTTGATC AAACAAGACGCTGACCTAAAGATGCATGGGATCCATCTGGTTTACGAGGGGGATGATGATTTGGGAGCCGAAGAAAGTGA CTGTGTGACGGATCAGACAATGCAAACCGTTTCTCAGAAACTTGCCAACTTTTTCGGGCCTTGCAAAGACGGTGAAGCCA GCTCACAAGGTGGTTCTACTGTTACATGA |
| AA seq | Len:1183 aa MMDLVDVKSTGDVQVLGLHGMGGIGKTTLAKRFYNKILENFEDHRCFISNVRQESSDGLLNLQKTFIKSLFGSVPEIEDV NSGRDKIRGRVREKKILAVLDDVDNVDQVDALVGERSWYGKGSVIIITTRDEEILSKLSVSQKYEVNCLTEVQALKLFSF HSLRKEKPTEKLLELSKKIVRITGKLPLAVEVFGSHMYDKKEDEWLTELEKLENTQPGDLQSVLALSFESLGDEEKTVFL DIACLFLKMEITKEEVMDVLKGCGLNAEAALTVLRQKSLVKLLSDKDNTLWMHDQIRDMGMQMVLNESREDPEMRSRLWD RGEIMNVLNYVKGTTSIRGIVLDFKKKFVSHSTAVEIGSSNLQNNQGISSAVSYVKNMFVKFPEEEKPKTSEITIPIEPF APMKKLRLLQINHVELEGDLKLLPSELKWIQWRDCPLKDVPPVFLSGQLSVLDLSESGIRRVQTLWFKKEDENLKVVNMR GCHSLEAIPDLSNHKALEKLVFERCKLLVKVPSSVGNLSKLLHLDFSYCTNLTEFLVDVSRLKHLEKLFLSGCSNLSVLP ENIGDMTRLKELLLDGTAIKNLPESIGGLENLEKLSLFGCRSIQELPDDLDALTSLEELDLSDTALKTLPSSIGGLINLK KLHLMHCTSLTKIPDTINKLISLKEFFINGSGVEELPLNLGPLQSLTEFSAGGCKSLKQVPSSIGMLNNLFQLELDHTPI VTLPEETGDLRFIQKLELRNCKSLKFLPKSIGGMDTLQSLYLTGSDIEELPEEFGKLEKLVLLQMNKCKKLKRLPNSFGD LKSLYHLYMEETSVVELPESFGNLSKLMTLKMLKRPLFRSDTQGSTKSFVIPDSFSNLESLEEVDARSWGVTGKIPDVFE KLTSVKILNLGNNYFHSLPSSLKKLTNLKELILYDCQELTCLPPLPCNLEKLNLADCLSLESVSNLSELTMLQELNLTNC KKVNDIPGLKQLKALKRLYMSGCNSDCSAYVKKTLSESKVSLKMLRNLSVPGNRIPDWFSQGPVRYIAQPNRELRGVIIA VVVTVNQESKDDFHVPDVLGIQAQILKLDKVLVNHTLNLTGVPRTSDDQLHICRYSQHYPMVSMLKEGYTIQVIKQKMLI KQDADLKMHGIHLVYEGDDDLGAEESDCVTDQTMQTVSQKLANFFGPCKDGEASSQGGSTVT* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | - |
| KEGG | leucine-rich repeat-containing protein, putative; K19613 leucine-rich repeat protein SHOC2 (A) |