Names & Information
Knowledge of BnaA08G0239900GG:
| Gene Name | BnaA08G0239900GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC09g23580D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance protein LAZ5 OS=Arabidopsis thaliana GN=LAZ5 PE=1 SV=1 |
| NT seq | Len:1926 nt ATGGAGTCTCTTCCTTCTTCCTCTGCAGAGCTCGACGTGTTTCTCAGTTTCAGAGGCTTTGACACACGCAACAACTTCAC CGGCCATCTCCAAAAAGCCCTCCGCCTTAGAGGAATAGACTCCTTCATCGACGACAAACTCCGCCGAGGAGACGACCTCA CTGCTCTTTTCGACAGAATTGAGCATTCAAAGATTGCCATCATAGTCTTCTCCAAGAACTACTCGAACTCCGCGTGGTGC CTCCGAGAGCTTGTTAAGATCCTAGAGTGCAGGGACAGAAACCAGCAGCTGGTGATACCAATCTTCTACAAAGTAGACAA GTCCGAATTAAAGAATGTTCCAAAGAAGAGTTTTACTGAAGTTAAGGAGGAAGAGACTTCAACGTGGGAAGCTGCACTGA CCACAGCATCCAACATCTCCGGCTATGTAGTCAATGAGTTCAGTACGTCTGAAGCCAAACTTGTGGACGAGATTGCTGTT GACACATTCAAGAAACTGAATGATTTGGCCCCCATTGGCAACGAAGGTCTGGTGGGAGTAGACTCACGTCTAGGGACTCT AGAAAAGCTTTTATGTTGCGATGAGGTGGACTCTGTTCATGTCATTGGCATTATTGGGATGGGCGGAATTGGTAAAACTA CTCTTGCTGATTGCTTGTATGGACGAATGCGAGGCCAGTTCGACGGTAGCTGCTTTCTTACAAACATCCGTGAAAACTCG AGTAGAAGCGGGTTAGAGTCTTTGCTGCAGAAACTCTTCTCCACGTTACTGAATGATAGAGATCTAGAGATCGGAGCTCC TGGAAATGCACATGAGAGGTTTGAGCGTCGGCTTAAGAGCAAGAGGCTGCTTATTGTGCTTGATGATGTGAACGATGAGA AGCAGATAAGGTATCTAATGGGGCACTCCAAATGGTATCAGGGAGGAAGTAGAATCATCATAACTACTAGAGATAGTAAA CTAGTCGAGGCGGTCAAGGGTCGAAAATATGTGCTCCCTAAACTGAATGATAGAGAAGCCCTGAAGCTCTTTTGCTTGAA TGCATTTAACGACTCTTGCCCTTTAAAAGAGTTTCAAAGTTTGACAAATATGGTTCTGGATTATGCTAAGGGACACCCTT TGGCGCTTAAGGTGTTAGGGTCTGATCTTTGTGAGAGGGATAATCAGTACTGGGAAGATAAATTGGATAGGCTGACAAGT AAATCACATGGAGATATCTATGAAGTTCTGGAAACAAGCTATGAGGAGCTTAGCATTGAGCAGAAGAATGTTTTTCTGGA TATTGCATGTTTCTTCAGATCAGAGAAAGTGGACTACGTGAAAAGCCTCCTCAACAGTCATGGTGTGGATGTGTCTAGCG TGATAGAGGATCTACTTGACAAATGTTTGATTACTCTTTCTGATGATCGCATCGAGATGCATGACATGTTGCAGACTATG GGCAAAGAGATTAGCTTAAAAGCAGAAACCATCGCAATAAGAAACTCTAGGTGGCTATCACCACATGGCACCCCGTTTCA GTCGCATATCAGACTATGGGATAGTGACTATATTTGTTACCTTCTAACTAAGGGCTTGGGAACTGACATGATAAGAGGAA TTTTCCTGGACACATCAAAACAAGGAGCAATGCGGCTAAGCGCCAAAGCTTTCAAAGGGATGTGCAATCTCAAGTACCTG AAAATTTATGATTCTCGTTGCTCACGTGGATGTGAAGTGGATTGTAAAATTATCCTACGTAAGGGGCTTGATTTCCTTTC TGATGAGCTTACATATCTACACTGGTATGGATGCCCACTACAGAGTCTCCTTCTGAACTTTGACCCCAAGAACCTTGTAG ACCTTAAGCTTCCATATAGTGAGTTAGAAGACATTTGGGACCAAGACAAGGTTCATTTATTAAATGACTTTAATGATCGA GTTTGA |
| AA seq | Len:642 aa MESLPSSSAELDVFLSFRGFDTRNNFTGHLQKALRLRGIDSFIDDKLRRGDDLTALFDRIEHSKIAIIVFSKNYSNSAWC LRELVKILECRDRNQQLVIPIFYKVDKSELKNVPKKSFTEVKEEETSTWEAALTTASNISGYVVNEFSTSEAKLVDEIAV DTFKKLNDLAPIGNEGLVGVDSRLGTLEKLLCCDEVDSVHVIGIIGMGGIGKTTLADCLYGRMRGQFDGSCFLTNIRENS SRSGLESLLQKLFSTLLNDRDLEIGAPGNAHERFERRLKSKRLLIVLDDVNDEKQIRYLMGHSKWYQGGSRIIITTRDSK LVEAVKGRKYVLPKLNDREALKLFCLNAFNDSCPLKEFQSLTNMVLDYAKGHPLALKVLGSDLCERDNQYWEDKLDRLTS KSHGDIYEVLETSYEELSIEQKNVFLDIACFFRSEKVDYVKSLLNSHGVDVSSVIEDLLDKCLITLSDDRIEMHDMLQTM GKEISLKAETIAIRNSRWLSPHGTPFQSHIRLWDSDYICYLLTKGLGTDMIRGIFLDTSKQGAMRLSAKAFKGMCNLKYL KIYDSRCSRGCEVDCKIILRKGLDFLSDELTYLHWYGCPLQSLLLNFDPKNLVDLKLPYSELEDIWDQDKVHLLNDFNDR V* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | TIR domain |
| KEGG | hypothetical protein; K19613 leucine-rich repeat protein SHOC2 (A) |