Names & Information
Knowledge of BnaA08G0240000GG:
| Gene Name | BnaA08G0240000GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: probable WRKY transcription factor 19 isoform X1 [Brassica rapa] |
| Best Hit (SwissProt) | Probable WRKY transcription factor 19 OS=Arabidopsis thaliana GN=WRKY19 PE=2 SV=1 |
| NT seq | Len:3414 nt ATGCTGCAGCCACGGGCATGGAAGCTGCGTTTTGTAAACTCGCCACCACCGATGATATTTACGTTTTCCAGGATCGAGGC GGAGGACGGTTCTCCGATAGCAATCGAGCTCCTCGATGCCGCCACAAACGCTCGAGTCACCTCCGAGTTGCGGCTCGAGA TCGTAGCGCTGAACGCTGATATCGCCGAGGAAAGCTTCACCACCACCGAGGAGTTTAACAGGAATATTCTCCGACCACGG CAAGGGAAACCACCATTGCTCGTCGGAGACCTGACCGTGACGCTTAAAGACGGGGTCGGAGTAGTCAACGGCGACGTCAC TTTCACAGAAAATTCGAGATGGACGAGATGCAGGATGTTCCGATTAGGTGCTAAAGTTACACAACAAGGAGGAGTTGCGG AGGCCATAAGTAGAGCCTTCGTGTGCAGAGATCGTCCAGGAGGAGAATCTTATTCCGATTTCAAGGTAGACGACATGACC AAACACGGAGTTAAAGAATCATCTTCACCGGGCGGCGGCAATCAACAACAGAAGCAGAGACGCCAGCTTCAGATCCGTGG TCATCGTCCTTCACCTCTCAGCGTTAACAAAGACTCCCACGTGATTAAGAAACCTCCCACGTTAACTCCGCGAGAGCCGG TGGTTGTCTCGCCCAAGGTCGTACACACCACCATGAGTGATTTCAGGAGCGTCGTCCACCGACTCACCGGGGCTAACAAC TCTGTTTCCGAACTGCAATTTTCTGCATCATCCCCCTCTACTGATTATGAAGTCATAGTCATATACAGGAGAGGTGACAT AACCAATGATGCTTTTGTTAAGGTCGTCCAGCGACTCACCGGGATTCCTAACTCTGCCTCTCTGCCTCTTAACTCATACG TTGAAATTGAAAAAGGGTCCTCAAAGTATCTGCAAGACACTGAACTAAGCACATCCGCCATTGGGGAATATGATGTCGTA ATCAGATACATGAGAGGTTGCATAAGCAAAGGTGATTTCATCAGCCATCTTCGTGCTGCCCTCTGCCGGAGAGGGGTTTC TGTCCGCCAAGACATCGATGAAGTTTACACAGTTCCAGAATGTAGGGTTTTGATCATATTCTTGACCAGCACATACGTCC CTTCCAACCTGGTAAACATTGTTGAACAGCAAAGTAAAAAGCCTCGAGTGGTTTACCCGATTTTTTATGGAATTTCACCA TCTGATTTGATCACTAATAGCGAGTATTATGAGAGTTTTTCCCTCCAAGACGAGCCAAAACGATGGCAGGCTGCTTTGGA GAAAATAACTCAGATGCATGGCTACATATTGACTACAGATAAGTCCGAGTCTGACTTCATAGACGAGATTGTCAATGATG CTTTGGAGGTGCTACGTTCCAACTATAAGAAGAATATTATTGGGATGGATACGCAGATAAAGGAGATCTTGTCACTGCTA TGCATTGAGTCTCAAGATGTTCGCCGCATAGGTATATGGGGTGCGGTTGGTATAGGAAAAACAGCCGTTTCTGAAGAAAT CTTCCATAGAATCTCTGTCCAATATGAGACTTGTGTCTTCCTCAAGGATCTCCATAAAGAAGTCGAGCTAAAAGGGTACG ATGCTGTGAGGGAGGAACTATTGTCTAAACTTTTAGAGGTAGAACCAGATGTCGTACGTACTTCAAACATTAAAACGAGT TTCTTGAGGAACAGGCTTCAGCGTAAAAGGGTCCTCGTAGTTCTCGACGATGTGAAAGATTTCAGGGATGTTGAAACATT TGTGGGGACGCTTATCTATTTTGGTCCAAGAAGCAGAATAATCATAACGTCTAGGAACAGACATGTTTTTGTACTATGCA AAACCGATCATGTCTATGAGGTCAAGCCATTAGAATTTCCCAACTCTCTACATCTTCTGAACCCCGGAATATTTCAGAGT GGTCTGTCACCCGAGCTTTACAAGACATTGTCACTTGAGCTGGTCAAATTCTCAAATGGAAATCCTCAGGTTCTTCAGTT CTTAAGCAGATCCAGCAGAGAATGGAAAAGTTTATCACAAGAAATTCAGAAATCTTCTGCCATTTACATTCCAGGTATAT TCGAAAGAAGCTGTTGTGGGCTTGATGAAAACGAAAAGAGTATATTTTTAGACATTGCATGTTTCTTTAGAAAGATGGAT AAAGACGACGTTGCAATGTTGCTTGATGGATGTGGTTTCTCTGCACATATTGGATTTAAAAACCTTGTTGACAAATCACT GTTAACCATATCACACAATACGGTGGACATGCTCTGGTTCCTCCAGGCAACAGGCCGAGAAATTGTTCGCCAAGAATCTA TTGACAGGCCAGGGGACCGCAGCAGGTTGTGGAATGCTGAAGATATTAGAGACGTATTCCTAGACAACACTGGCACGTCA GCTATTGAAGGGCTTTTCCTGGACATGTCGCAGCTGAAATTCGATGCAAGTCCCAATGTATTCGACAAAATGTGTAACCT TAGACTGTTAAAGTTTTATTTCTCCGAGTTGATAGAGAACCATGGAGTGTCTTTACCTCAAGGTCTTGAATACTTGCCGA CCAAGCTAAGGCTTCTGCACTGGGAATACTATCCTATAAGCTCTTTGCCGCAATGTTTTGATCCAAAGAACCTCATAGAG CTTAACATGCCAAATAGTTGTGTGAAGAAACTTTGGAAAGACAAAAAGAGTCTGGAAAACCTTAAAAAGATGAGACTGAG CTACTCCTACCAGTTAACAAAGCTTCCAAGACTTACAAGTGCGCAAAACCTCGAGCTTCTTGATCTTGAAGGTTGTAAGA GTTTGGTGAGCATTAGCCACTCTATCTGTTATCTTAAAAAGCTTGTTTCTCTGAATCTGAAGGACTGCTCGAATCTGGAG AGTGTACCATCTACCAGTGATTTAGAGTCTCTTGAGGTTTTGAATCTTTCTGGCTGCTCGAAGCTAGAGAATTTTCCGGA GATCTCACCAAATGTGAAAGAATTGTACTTGGGTGGGACTGTGATACAAGAAATACCATCATCGATCAAGAACTTGGTGC TTCTTGAAAAACTTGACCTGGAAAACAGCAGACGCCTCGTGATTCTTCCAACGAGCATATGCAAGTTAAAGCATCTCGAA ACGCTGAATCTGTCAGGCTGCTCAAGCCTTGAGAATTTTCCAGACTTGTCTAGAAATATGAAATGCTTAAAGTATCTGGA TTTGAGCAGGACGGCCATTAGAGAGCTACCCTCCTCCATTTCATATCTGACTGCTCTTGAAGAAGTAAGATTTGTGGGAT GCAAGAGCCTCGTAAGATTGCCTGACAACGCGTGGAGCCTAAGATTCAAGGTTGAATTTCGCCAGATTGATACGGAGAAG TTTTCGAAACTGTGGAATAGATTTGGATGGCTCAAAAAAGTTCACATCTCTTAG |
| AA seq | Len:1138 aa MLQPRAWKLRFVNSPPPMIFTFSRIEAEDGSPIAIELLDAATNARVTSELRLEIVALNADIAEESFTTTEEFNRNILRPR QGKPPLLVGDLTVTLKDGVGVVNGDVTFTENSRWTRCRMFRLGAKVTQQGGVAEAISRAFVCRDRPGGESYSDFKVDDMT KHGVKESSSPGGGNQQQKQRRQLQIRGHRPSPLSVNKDSHVIKKPPTLTPREPVVVSPKVVHTTMSDFRSVVHRLTGANN SVSELQFSASSPSTDYEVIVIYRRGDITNDAFVKVVQRLTGIPNSASLPLNSYVEIEKGSSKYLQDTELSTSAIGEYDVV IRYMRGCISKGDFISHLRAALCRRGVSVRQDIDEVYTVPECRVLIIFLTSTYVPSNLVNIVEQQSKKPRVVYPIFYGISP SDLITNSEYYESFSLQDEPKRWQAALEKITQMHGYILTTDKSESDFIDEIVNDALEVLRSNYKKNIIGMDTQIKEILSLL CIESQDVRRIGIWGAVGIGKTAVSEEIFHRISVQYETCVFLKDLHKEVELKGYDAVREELLSKLLEVEPDVVRTSNIKTS FLRNRLQRKRVLVVLDDVKDFRDVETFVGTLIYFGPRSRIIITSRNRHVFVLCKTDHVYEVKPLEFPNSLHLLNPGIFQS GLSPELYKTLSLELVKFSNGNPQVLQFLSRSSREWKSLSQEIQKSSAIYIPGIFERSCCGLDENEKSIFLDIACFFRKMD KDDVAMLLDGCGFSAHIGFKNLVDKSLLTISHNTVDMLWFLQATGREIVRQESIDRPGDRSRLWNAEDIRDVFLDNTGTS AIEGLFLDMSQLKFDASPNVFDKMCNLRLLKFYFSELIENHGVSLPQGLEYLPTKLRLLHWEYYPISSLPQCFDPKNLIE LNMPNSCVKKLWKDKKSLENLKKMRLSYSYQLTKLPRLTSAQNLELLDLEGCKSLVSISHSICYLKKLVSLNLKDCSNLE SVPSTSDLESLEVLNLSGCSKLENFPEISPNVKELYLGGTVIQEIPSSIKNLVLLEKLDLENSRRLVILPTSICKLKHLE TLNLSGCSSLENFPDLSRNMKCLKYLDLSRTAIRELPSSISYLTALEEVRFVGCKSLVRLPDNAWSLRFKVEFRQIDTEK FSKLWNRFGWLKKVHIS* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | hypothetical protein; K19613 leucine-rich repeat protein SHOC2 (A) |