Names & Information
Knowledge of BnaA08G0248000NO:
| Gene Name | BnaA08G0248000NO |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: disease resistance protein RPS5-like [Brassica rapa] |
| Best Hit (SwissProt) | Disease resistance protein RPS5 OS=Arabidopsis thaliana GN=RPS5 PE=1 SV=2 |
| NT seq | Len:2679 nt ATGGGCGGTTGTTTCTCTGTCTCGTTGCCATGTGATCAAGTGGTGAATCAATTTTCTCAGTGGTTATGCCTCAGGGGGCG TTATATCCACAACCTCCCCGAGAATATAGTTGCTCTTCAGCATGCCATGGCAATGCTCACGGCAAAGCTAGACGATGTGC TGAGAACAGTGGGCAGAGAGGAGTTTACAGGGCGTCAACAAAGGATTTCCCAAGTTCAGGTATGGCATGCTAATGTCCTA ACCACCAAAAACAAAGTTGACGATCTGCTTAGTACTTATGAGGCTGAGCTTCAAAGGTTGTGCCTATGTGGTTTTTGCTC CAAAGATTTAAAACTGAGCTATCTTTATGGAAAAAATGTTAGCATTATGTTGACAGAAGTTGAGAAACGCAGTTCTCAAG GAGATTTTGATATGGTGGTTGAGGCAGCTACGTTTGGTGAGGTGGATGAGATCCCTATTCATCCCACCATTGTTGGTCAG GAAAGAATGCTTGAAAAGGCATGGACGCTTCTCATGGAAGATGGATCAGGGATGTTGGGTCTGTACGGTATGGGAGGAGT GGGGAAAACCACACTGCTCACACAGATCAACAATAAGTTTTCTGAAATAAGTGACAGGTTTGAAGTTGTGATATGGGTTG TTGTGTCTAAAAGTGCAACAGTCCGTAAGATTCAAAGAGACATAGCTCAAAAGGTTGGCCTTGTGGAGATGGGTTCGGGA GAGAAAGACGAGAACCAGAGAGCCCTTGACATCTACAATGTTCTTAGAAGAAGAAAGTTTGCGTTATTGTTGGATGACAT ATGGGAGAAAGTGGATTTAAAAGCGGTAGGAGTCCCCTACCCAACTAGAGATAATGGATGCAAGGTAGCATTCACAACTC GCTCTCGAGATGTGTGTGGCCGCATGGGGGTTGATGATCCAATGGAAGTTAGCTGTTTGCAACCAGACGAGTCGTGGGAT CTGTTCCAAAGGACAGTTGGGGAAAACACACTGGGAAGTCATCCAGACATTCCAGAACTTGCGAGAAAAGTCGCTAGGAA ATGCCGTGGCCTACCGTTAGCACTCAGTGTTATCGGTGAAACCATGGCATGCAAAAGGACAGTACATGAATGGTGTCATG CGGTTGACGTTTTGACATCATCTGCCACAGAATTTTCAGGTATGGAAGATGAGATCCTTCCTGTTTTGAAGTATAGCTAT GATAATTTAAGTGGGGAGATGGTGAGATCATGCTTCCTCTATTGCTCTTTGTTTCCTGAAGATTATCATATTGACAAAGA GAGGCTGGTAGAGTACTGGATATGTGAGGGGTTCGTAAGTGAAAAGGAAAGTAGAGAGAGGACATTAAACCAAGGTTATG AGATCGTTGGTACACTTGTCCGTGCATGTTTGTTGATGGAGGAAAGAAAGGATAAATCATACGTGAAAATGCATGATGTG GTTCGTGAGATGGCGTTGTGGATATCATCTGATTTTGGTAATCAAAAGGAGAGATGTGTTGTGCGAGCTGGTGTTGGGTT GCGTGAAGTACCAAAACTCAAGGAGTGGGCTACTGTGAGAAAGATGTCTTTGATGAATAACGGGATTGAAGAGATCTTTG ACAGTCACGAGTGTGGTGATCTTACAACTCTATTTCTACATAGAAACGCGTTTGTAAAGATCTCGGGTGAGTTCTTTCGA TGCATGCCTCATCTAGTTGTTTTGGATCTATCAGAGAATCACAGTCTTGAGGAACTACCAGAAGAAATATCAGAGTTGGG CTCTTTGAGATATTTGGACGTGTCATACACATGTGTAAATCAGCTACCGGTTGGTTTATGGGAACTGAAGAAGCTAATAC ATCTCAATCTGGAACACATGATCAAACTAGGGAGTGTTTCAGGGATATCAAGTTTGTGGAATTTGAGGACATTAGGACTA CGAGGTTTGGTGCTAGATATGAGGCAAGTGAATGAGCTGGAACTCTTGGAACATCTACAAGTTGTAACCATAGATATATC ATCGCCTTCGGTTGTGAAGCCATTGTTATGGTCTCATAGGTTGGTCGTGTGTATCAGAGAGGTTGATTTTAAGTACCTTG AGGAAGAATCAATGAGAGTCTTGACTTTGCCAACTATAGTCAATCTCCGTAGGCTCAGCATTAAAAGGTGTGGAATGAGG GAGATAGAGATAGAGAAGACAGCTTCTTCGTCATCATCATCATGGAACAAAATTCACACAGCTCCATACTTCTCAAACCT CTCTAAAGTCTTTATAACTAAATGTCATGGTCTTAAGGATTTGACGTGGCTGTTGTTTGCTCCAAACCTTGCTTTTCTCC AAGTTAGTTTCTCAGGGCAATTAGAGGATATAATTAACCAAGAGAAAGCTGCGAGTGTTGAGAATGCAGCTACCATTGTT CCTTTTAGGAGACTAGAAACGCTGCACCTATCTGCTTTACGTGGGCTCGAGAGAATATATTGGAATGCTCTGCCGTTTCC GTGTCTGAAAGTTATCCACGTTGAAAAATGTTGGAAGCTAAGAAAGCTTCCTTTGGATTCTAATAGTGGCGCCGGGGGTA AAGAACTGGTCCTAAGTTATGGAGACAGAGAATGGATAGAAAAGCTTGAATGGGAGGACCAAGCCACTCGAGTTCGTTTC TTAACTTCGTGCAGGTGGCACTGGCGAGCAACACAATGA |
| AA seq | Len:893 aa MGGCFSVSLPCDQVVNQFSQWLCLRGRYIHNLPENIVALQHAMAMLTAKLDDVLRTVGREEFTGRQQRISQVQVWHANVL TTKNKVDDLLSTYEAELQRLCLCGFCSKDLKLSYLYGKNVSIMLTEVEKRSSQGDFDMVVEAATFGEVDEIPIHPTIVGQ ERMLEKAWTLLMEDGSGMLGLYGMGGVGKTTLLTQINNKFSEISDRFEVVIWVVVSKSATVRKIQRDIAQKVGLVEMGSG EKDENQRALDIYNVLRRRKFALLLDDIWEKVDLKAVGVPYPTRDNGCKVAFTTRSRDVCGRMGVDDPMEVSCLQPDESWD LFQRTVGENTLGSHPDIPELARKVARKCRGLPLALSVIGETMACKRTVHEWCHAVDVLTSSATEFSGMEDEILPVLKYSY DNLSGEMVRSCFLYCSLFPEDYHIDKERLVEYWICEGFVSEKESRERTLNQGYEIVGTLVRACLLMEERKDKSYVKMHDV VREMALWISSDFGNQKERCVVRAGVGLREVPKLKEWATVRKMSLMNNGIEEIFDSHECGDLTTLFLHRNAFVKISGEFFR CMPHLVVLDLSENHSLEELPEEISELGSLRYLDVSYTCVNQLPVGLWELKKLIHLNLEHMIKLGSVSGISSLWNLRTLGL RGLVLDMRQVNELELLEHLQVVTIDISSPSVVKPLLWSHRLVVCIREVDFKYLEEESMRVLTLPTIVNLRRLSIKRCGMR EIEIEKTASSSSSSWNKIHTAPYFSNLSKVFITKCHGLKDLTWLLFAPNLAFLQVSFSGQLEDIINQEKAASVENAATIV PFRRLETLHLSALRGLERIYWNALPFPCLKVIHVEKCWKLRKLPLDSNSGAGGKELVLSYGDREWIEKLEWEDQATRVRF LTSCRWHWRATQ* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0006952 |
| Pfam | Leucine rich repeat |
| KEGG | disease resistance protein RPS5-like; K13459 disease resistance protein RPS2 (A) |