Names & Information
Knowledge of BnaA08G0263400NO:
| Gene Name | BnaA08G0263400NO |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: putative disease resistance protein At4g10780 [Brassica rapa] |
| Best Hit (SwissProt) | Disease resistance protein RPS5 OS=Arabidopsis thaliana GN=RPS5 PE=1 SV=2 |
| NT seq | Len:2613 nt ATGTGGAACATAGTTTTAAACGTACTTAAATTCTGCTTTCAACCTGCAAAAAATTGGTTTCTTGAAAAGGCCAAGTATAT ACTCGAACTGGAAGATAATCTTGACGCTTTGCAAGAGGTTGCGCCACGCCTCAAAGCAGTGAAGGATGACTTGCAGAAAC AAATTGAGATGGAAGAACGTAGAGGTTTGCGAGCGCTAGACGAATTCAACGTATGGCTTTCAGAAGTCGAAGCCGTCCAA CCAAAGTTCACTAAACTGCTTGAAGATAGGACTGCAGAAATCGAAAGATTGTCTATGGGCGGGTACTGCTCCACCAACTA CTTTTTAACCTATCGTTATGGTAAAGATGTATTAGAAACATTGGAGAAAGTAAAAGGTACTTTGTCTTCCAAACCTGCGG GTGATGTGGTGGCTAGAATGGGTCCTCCACCTGGTATAGTGGAGAGAACCACTCAATGCACAGTCGGTTTAGAGAAGATG CTTGAAGCTACATGGAGCCGTCTCATGAAGAAAGAAGTTGGAATCTTGGGTCTTTACGGTATGGGAGGAATAGGGAAAAC CACACTTCTCAAACAAATCAACCATAAGTTACTTGAGAAAAAAGATGACTTTGCGGTCGTGATATTTGTAGTGGTGTCTC AAAATCTACAGGCTGGAAAGATCCAAAATGAGATTGGTGAAAGACTAGGCCTCTGTGACATGGCGTGGGAGAAAAAAACT CAAAACGAGAAAGCCTCTCGTATATATGGTGTTCTTACAAAGAGAAGATTCGTTATGTTATTAGATGACATATGGAGGAA AGTGGATTTAGAAGAAGAGATCGGGATTCCATTACCCTCACAAGAAAATGGAAGCAAGGTTGTCTTTACCACTCGCTCGA AATACGTTTGTGGGCGTATGGGACCTGATGACTTGCAAGTCAAGCAACTAGACCAGAATAAGGCTTGGGAACTATTCCGA CAGAAAGTGAGAGGTACCACACTTGACAATGATCCAAAGATCCTCGAGCTAGCAAAACAAATATGTGAGAAATGTGAAGG CTTACCCCTTGCACTCAACGTTATTGGGGAAACAATGGCATGCAAAACGTCTGTACGCGAGTGGCAGTATGCGATTGATG TTCTAGATACAAATGCGGGTGGCTATCCAGAAGTTGAAGACGAGATTCTTAAAATTCTCAAGCTTAGCTATGATGATCTT AAGGACGAGACAGTACAGCAATGTTTCCAGTACTGTGCTTTATTCCCAGAAGATGATGAAATTGAGAAAGAGGACCTGGT CGAGTACTGGATAGCCGAAGGGATCATAAATGGTGGTGGAGACAGAGAAAGAGATATCAACCACGGTTATAGTATAATCG GTATCCTCATTAGTGCATGTCTGTTGATGCCTGATGACATTTTTCCTTTAGAGGCAGTAACAATGCATGATGTGATTCGC CAAATGGCTCTTTGGGTTGCGTCTAATTTTGGGAAAGAGGAAGAGAAAGTTATCGTCAAGGCAGGTGCTGGACTGCATCA GATGCCTGAGGTTAGGGACTGGAATGCGGTGAAAAGGATGTCACTGGCAAATAACAAGATTCAGAACATCTCCATCTCCC CGGTGTGTCCTAACCTTACCACATTGTTGTTAACACAAAACAACCTGGTGAACATCTCAGGTGATTTTTTTCTATCGATG CCTAAGTTAATGATTTTGGATCTATCTTACAACAAAAATCTAACCAAGCTGCCAGAAGAGGTTTCAAAGTTAGCGAGCTT GCGACATCTTGACTTATCAGGAACAAGTCTAGTGAACTTGCCTGTAGGATTGGGAAAGTTGATCCAGCTGAGATACCTTG CTTTGACCAAAGTACGAACTCTTGAAAGCATCAGCTTGATATCAAGTTTGGTAAATATAGAACTCCTATGGTTAAATGAG ACTACTTTAGTAAGTCTTGAGTTGATAGAGGATATAAAGTTACTGAAGAATTTGAAAGGCTTGGGAGTAAGTATCGATGA TGTGGTTGTTTTACAAAGTCTTTTAAGTATCCCCAAGTTGGCTAGCTGTATCCAACATCTATTTCTGGAGGGAATTGAAG CAAAAGACGGTCCGTTGCAGTTAGAAACGGCTATGGCTAGCCTTCGCTCTATCAAGATAGAAAGGTGTATCATCTCTGAT ATAATGGATCATACGAGATATGGATGCACAAGTACAAGTGCCATATGCTTCCAAAACCTCGGCTATGTCAACATATCTGG CGTCAGTTGTATACAGGATTTGTCGTGGTTAATCTTTGCTCCGAATCTTGCGATTGTATTCGTAGAGGGGCCATCACCGG AGTTGCAAGAAATTATAAGCAGAGAAAAGGTCTGTGGTATACTAAACAAGGGGTCGAGTATTGTACCGTTTAGAAAACTA CATACGATTTACTTAGAAGATTTGGAGGAACTGAAGAGTATCTACTGGGAACGGTTGGAATTGCCAAGTCTGAAGAGAAT GGAAATAAAATACTGTCCAAAGCTGAAAAAGCTTCCATTAAGCAAGGAGAGGGCATACTACTTTGACCTACATGAATACA ATGAAGAATGGTTTGAAACACTTGAGTGGGAAGATGAAGCTACTGAAGAATAG |
| AA seq | Len:871 aa MWNIVLNVLKFCFQPAKNWFLEKAKYILELEDNLDALQEVAPRLKAVKDDLQKQIEMEERRGLRALDEFNVWLSEVEAVQ PKFTKLLEDRTAEIERLSMGGYCSTNYFLTYRYGKDVLETLEKVKGTLSSKPAGDVVARMGPPPGIVERTTQCTVGLEKM LEATWSRLMKKEVGILGLYGMGGIGKTTLLKQINHKLLEKKDDFAVVIFVVVSQNLQAGKIQNEIGERLGLCDMAWEKKT QNEKASRIYGVLTKRRFVMLLDDIWRKVDLEEEIGIPLPSQENGSKVVFTTRSKYVCGRMGPDDLQVKQLDQNKAWELFR QKVRGTTLDNDPKILELAKQICEKCEGLPLALNVIGETMACKTSVREWQYAIDVLDTNAGGYPEVEDEILKILKLSYDDL KDETVQQCFQYCALFPEDDEIEKEDLVEYWIAEGIINGGGDRERDINHGYSIIGILISACLLMPDDIFPLEAVTMHDVIR QMALWVASNFGKEEEKVIVKAGAGLHQMPEVRDWNAVKRMSLANNKIQNISISPVCPNLTTLLLTQNNLVNISGDFFLSM PKLMILDLSYNKNLTKLPEEVSKLASLRHLDLSGTSLVNLPVGLGKLIQLRYLALTKVRTLESISLISSLVNIELLWLNE TTLVSLELIEDIKLLKNLKGLGVSIDDVVVLQSLLSIPKLASCIQHLFLEGIEAKDGPLQLETAMASLRSIKIERCIISD IMDHTRYGCTSTSAICFQNLGYVNISGVSCIQDLSWLIFAPNLAIVFVEGPSPELQEIISREKVCGILNKGSSIVPFRKL HTIYLEDLEELKSIYWERLELPSLKRMEIKYCPKLKKLPLSKERAYYFDLHEYNEEWFETLEWEDEATEE* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine rich repeat |
| KEGG | RGA-7; putative disease resistance protein At4g10780; K13459 disease resistance protein RPS2 (A) |