Names & Information
Knowledge of BnaA08G0271900GG:
| Gene Name | BnaA08G0271900GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: putative disease resistance protein At4g11170 [Brassica rapa] |
| Best Hit (SwissProt) | Putative disease resistance protein At4g11170 OS=Arabidopsis thaliana GN=At4g11170 PE=2 SV=1 |
| NT seq | Len:3258 nt ATGTCGTCGTGGTGCGGTCCTTCACGTCGTCAAGTCAAATACGATGTCTTCCTCAGCTTCCGAGGCGGAGACACACGTAA AAACATCATTAGCCATTTGCACAAAGAACTTGTGAGACAAGGGATACGTACATTCAAAGACGACGAGACGCTGGAAACAG GAGACCGTTTCCCCGAAAGACTCCGTGAAGCCATCAACACATCGAGGTTCGCCATTGTGGTTATCTCGAAGAACTACGCT TCTTCGAGATGGTGCTTGGAAGAGCTTCGAATGATAATGAAGCTTCAACGGGAGAAAAAGATTGCTGTGATTCCTGTTTT CTATGAAGTGGATATCTCTGACGTTAGAAATCATCGAAGTGGTTTTGGTTTAGTACAACATCACAAAGATCCCAAGATTC CATTCTGGAAAGATGCACTTCGGGGAATCGCAAACACACAAGCCACCGAGTCAAGAAAATGCAAGGACGATGCCACGTTG GTTGAGGGAGTTGTTGAACTTGTTTCAGACAAGTTGTTGTCTATGTTGCCAATGGACCTCGGGGATATTGTTGGTATGGA AGCTGACATGGACCAAATCGAACATCTCTTGGACATGTCCTTTACGACCAATGAGGTTCGCATGGTAGGAATCTGGGGTA TGGCAGGCATTGGCAAAACTGCCATAGCCAAGAATCTTTATCAAAAACATAAACACCATTTCAAGACTCATCATTGTTTC ATGGAAAAGGTTTCTTCTCTGAAAGCAAAGAGTCCCTTGGATCTACAGAAACGGCTTCTTTCAGATATTCTTCGGAAAAA AGATCTCAAGGCACTGAACCTTGGCCAGGGAGCTCCTTGTATCAAGTCAAGGCTCGTAAACCTAAAATCTCTCATTGTTA TTGATGATGTGGATGATGTGAAACAGCTGGATGCCTTGGCAAAAGAGGCTAGTTGGTTTGGACCAGGGAGCCGAATCATC ATAACGACACGAGACAAGAGCTTGCTCAAGTTGTCCTCCTGTGCCGTGTACAAAGTTGAGTATCTGAAGGATGATAAGGC TCTCCAGATCTTTCAGCGGTTTGCTTTCCAAGGAGCAGAACCTCCTATTGCCTACAATGATCTTTCTATAAGTATCTCTC AGCTTGCTCAAGGTCTTCCTTCTGCCCTTGAGGATTTCGGCACTTATCTCCGTGGCAAGTCCGCAGTGGAGTGGCGAGAT GCTTTGAAATCATTTCAGGAAGCTCTTCCCGAGAAAACCTTAGTGGACTTGAAAAGTAGCTATCATGGTTTAGATGAACT TGGTAAGACAGCTTTTCTTCATGTCGCATGCCTTTTCAATGGAGAACCTGTCCGGCGAGTCAGGAAACTTCTTGGTCAAG GTAAAGCCGGAATGAGGGTTTTAAAGGAAAAGTCTCTCATCAAGGTGTCTTCTGATAGGCGTATAGCTATGCACCGTTTG CTGGAGCAAATGGGGAAACATATTGTGCGTCAAGAGTCAAACAACAACCCTTCTCAGCAACGTATCTTGTGGCACCATGA CGACATCCTTCGAGTACTTGACACCAATACAAGTAAGCACTTAATTGAAGGAGTGGTGCTAGATGTTTGTAAATTGCGCG CTGGAGTTCACATCAACTGGGATGATTTCAAGCCGATGTATAATCTCAGGTTTCTTAAGATATATTTCTCTAACCAATCA GGAGGTGTACAGCCATGGAAGGAATATATGACGCTAGAGAACAATTTCAGTGTACATAAGCTTAGGTTTCTACATTGGGA TGCATATCCTTTTACAACCTTGCCTACCAGTATCAGTCCAGATTGTCTTGTTGAACTAAAGCTGTGTTACAGCAAGCTCA AGACCCTTTGGCGTGGAACACCGAAACTTGTGAAACTGATGAAACTAGATTTGACCGGATCTAAGGATCTAACAAAACTT CCAAATCTCAAGGAAGCAAAGTCTCTAGAGGAGTTGATACTGAAAGGTTGCAGCTCCTTGGAACGGATTCCACACTCCAT ATGCAAACTATCTAGACTCCAGAAAATTGATGTGTCCAACTGTGACAGGCTGGAAAAGCTGAACATCAGTATATCGGATT CTAAAGATATTGGTTTTGAAGACACAAGCATGTGCCTAAGATCAGTCCACATGTTTTTCTTTGGCACAGAACCGTTTTTG GGCAATACTCAGGGATGCTCTCTTACAGACCCATCAATCAGAGGCAACTTACAAATCTACTTGAAGCTTCTTGAAGGATC TGCAGATCATCTATCTTTTGTTTCTGAGGACCACGTCTGTCGTGAAGTGAACCTCAAGTCACCTCCCTATGGTTTTAAAT CACTGGACATCATGCGGTTTAAGTGGGTTGAGAAGGGTAGTGAGTCCAAATGTAATAGCTTCTCAGGGTTTCCATGGTTA CAGGAGTTAACTCTCATCAACCTAAACATCAAGAAGATTCCAGATGACATTGACCAGATGCACGTCCTAGAGAAGTTGGA CCTCAGTGGGAATCTCTTTGAGAAGTTACCTACGACAATGAGTCATCTCACCAAGTTGAAACATCTGACGCTTTCCAACT GCCGCAGCCTTGAAGAACTGCCAGAACTATCTCAGCTGGAGAGTCTAACACTTTCTGACTGTACCAACCTCCGAACTCTG GTGAAGAAACATCAAGGAACAACATACAATATGCTTGAGCTTTGGCTTGACAACTGCAAGAAAATCGAGTCATTACCAAA TGAGCTTAAGCATTTCACCAAGCTGACATGTTTAGATCTCAGCAGACACGATTTCAAGACAATATCGTCAAAGATGGTGG GCGACTTAACCTCCTTGGCAACTCTCAGCCTCAATTACTGCAACAACCTTGTATCACTGTCAGGGCTTCCACTGAGTCTC AAGTGTTTGAATGCACATGGCTGCAAGTCTCTAAAGACTTATTCCCTTCAGGCCGCGCATTCTATTGATCGCATAGATCT TAGCCCTTGCCCCAATGGGAAGGACTATAGTACATTCACTAGGTTTCCAGCTGGAAGACGCAGTAAAGAGGTACCAGTAT GTGCTTGTCCTTGCTTCCAGGAAACAACAACACGTCGTAAGGTTAAACATGCGACTTGTAGTCACATGTCAATCTTCTTG AGGTGTTTAAAGTCATGGTTGTGGGATTTCTTCCTGTGTTTATTGGCTGTGGTTGTCGGCATTTTTCTTGCGGTGATAAC CGATCATGTCATCGCAACTACATTATTAATGACTATTTTTATGTATCTGAGGTTGTAA |
| AA seq | Len:1086 aa MSSWCGPSRRQVKYDVFLSFRGGDTRKNIISHLHKELVRQGIRTFKDDETLETGDRFPERLREAINTSRFAIVVISKNYA SSRWCLEELRMIMKLQREKKIAVIPVFYEVDISDVRNHRSGFGLVQHHKDPKIPFWKDALRGIANTQATESRKCKDDATL VEGVVELVSDKLLSMLPMDLGDIVGMEADMDQIEHLLDMSFTTNEVRMVGIWGMAGIGKTAIAKNLYQKHKHHFKTHHCF MEKVSSLKAKSPLDLQKRLLSDILRKKDLKALNLGQGAPCIKSRLVNLKSLIVIDDVDDVKQLDALAKEASWFGPGSRII ITTRDKSLLKLSSCAVYKVEYLKDDKALQIFQRFAFQGAEPPIAYNDLSISISQLAQGLPSALEDFGTYLRGKSAVEWRD ALKSFQEALPEKTLVDLKSSYHGLDELGKTAFLHVACLFNGEPVRRVRKLLGQGKAGMRVLKEKSLIKVSSDRRIAMHRL LEQMGKHIVRQESNNNPSQQRILWHHDDILRVLDTNTSKHLIEGVVLDVCKLRAGVHINWDDFKPMYNLRFLKIYFSNQS GGVQPWKEYMTLENNFSVHKLRFLHWDAYPFTTLPTSISPDCLVELKLCYSKLKTLWRGTPKLVKLMKLDLTGSKDLTKL PNLKEAKSLEELILKGCSSLERIPHSICKLSRLQKIDVSNCDRLEKLNISISDSKDIGFEDTSMCLRSVHMFFFGTEPFL GNTQGCSLTDPSIRGNLQIYLKLLEGSADHLSFVSEDHVCREVNLKSPPYGFKSLDIMRFKWVEKGSESKCNSFSGFPWL QELTLINLNIKKIPDDIDQMHVLEKLDLSGNLFEKLPTTMSHLTKLKHLTLSNCRSLEELPELSQLESLTLSDCTNLRTL VKKHQGTTYNMLELWLDNCKKIESLPNELKHFTKLTCLDLSRHDFKTISSKMVGDLTSLATLSLNYCNNLVSLSGLPLSL KCLNAHGCKSLKTYSLQAAHSIDRIDLSPCPNGKDYSTFTRFPAGRRSKEVPVCACPCFQETTTRRKVKHATCSHMSIFL RCLKSWLWDFFLCLLAVVVGIFLAVITDHVIATTLLMTIFMYLRL* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |