Names & Information
Knowledge of BnaA08G0291000GG:
| Gene Name | BnaA08G0291000GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaA08g24860D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance protein RPS5 OS=Arabidopsis thaliana GN=RPS5 PE=1 SV=2 |
| NT seq | Len:2679 nt ATGGGCGGTTGTTTCTCTGTCTCGTTGCCATGTGATCAAGTGGTGAATCAATTTTCTCAGTGGTTATGCCTCAGGGGGCG TTATATCCACAACCTCCCCGAGAATATAGTTGCTCTTCAGCATGCCATGGCAATGCTCACGGCAAAGCTAGACGATGTGC TGAGAACAGTGGGCAGAGAGGAGTTTACAGGGCGTCAACAAAGGATTTCCCAAGTTCAGGTATGGCATGCTAATGTCCTA ACCACCAAAAACAAAGTTGACGATCTGCTTAGTACTTATGAGGCTGAGCTTCAAAGGTTGTGCCTATGTGGTTTTTGCTC CAAAGATTTAAAACTGAGCTATCTTTATGGAAAAAATGTTAGCATTATGTTGACAGAAGTTGAGAAACGCAGTTCTCAAG GAGATTTTGATATGGTGGTTGAGGCAGCTACGTTTGGTGAGGTGGATGAGATCCCTATTCATCCCACCATTGTTGGTCAG GAAAGAATGCTTGAAAAGGCATGGACGCTTCTCATGGAAGATGGATCAGGGATGTTGGGTATGTACGGTATGGGAGGAGT GGGGAAAACCACACTGCTCACACAGATCAACAATAAGTTTTCTGAAATAAGTGACAGGTTTGAAGTTGTGATATGGGTTG TTGTGTCTAAAAGTGCAACAGTCCGTAAGATTCAAAGAGACATAGCTCAAAAGGTTGGCCTTGTGGAGATGGGTTCGGGA GAGAAAGACGAGAACCAGAGAGCCCTTGACATCTACAATGTTCTTAGAAGAAGAAAGTTTGCGTTATTGTTGGATGACAT ATGGGAGAAAGTGGATTTAAAAGCGGTAGGAGTCCCCTACCCAACTAGAGATAATGGATGCAAGGTAGCATTCACAACTC GCTCTCGAGATGTGTGTGGCCGCATGGGGGTTGATGATCCAATGGAAGTTAGCTGTTTGCAACCAGACGAGTCGTGGGAT CTGTTCCAAAGGACAGTTGGGGAAAACACACTGGGAAGTCATCCAGACATTCCAGAACTTGCGAGAAAAGTCGCTAGGAA ATGCCGTGGCCTACCGTTAGCACTCAGTGTTATCGGTGAAACCATGGCATGCAAAAGGACAGTACATGAATGGTGTCATG CGGTTGACGTTTTGACATCATCTGCCACAGAATTTTCAGGTATGGAAGATGAGATCCTTCCTGTTTTGAAGTATAGCTAT GATAATTTAAGTGGGGAGATGGTGAGATCATGCTTCCTCTATTGCTCTTTGTTTCCTGAAGATTATCATATTGACAAAGA GAGGCTGGTAGAGTACTGGATATGTGAGGGGTTCGTAAGTGAAAAGGAAAGTAGAGAGAGGACACTAAACCAAGGTTATG AGATCGTTGGTACACTTGTCCGTGCATGTTTGTTGATGGAGGAAAGAAAGGATAAATCATACGTGAAAATGCATGATGTG GTTCGTGAGATGGCGTTGTGGATATCATCTGATTTTGGTAATCAAAAGGAGAGATGTGTTGTGCGAGCTGGTGTTGGGTT GCGTGAAGTACCAAAACTCAAGGAGTGGGCTACTGTGAGAAAGATGTCTTTGATGAATAACGGGATTGAAGAGATCTTTG ACAGTCACGAGTGTGGTGATCTTACAACTCTATTTCTACAAAGAAACGCGTTTGTAAAGATCTCGGGTGAGTTCTTTCGA TGCATGCCTCATCTAGCTGTTTTGGATCTATCAGAGAATCACAGTCTTGAGGAACTACCAGAAGAAATATCAGAGTTGGG CTCTTTGAGATATTTGGACGTGTCATACACATGTGTAAATCAGCTACCGGTTGGTTTATGGGAACTGAAGAAGTTAATAC ATCTCAATCTGGAACACATGATCAGACTAGGGAGTGTTTCAGGGATATCAAGTTTGTGGAATTTGAGGACATTAGGACTA CGAGGTTTGGTGCTAGATATGAGGCAAGTGAATGAGCTGGAACTCTTGGAACATCTACAAGTTGTAACCATAGATATATC ATCGCCTTCGGTTGTGAAGCCATTGTTATGGTCTCATAGGTTGGTCGTGTGTATCAGAGAGGTTGATTTTAAGTACCTTG AGGAAGAATCAATGAGAGTCTTGACTTTGCCAACTATAGTCAATCTCCGTAGGCTCAGCATTAAAAGGTGTGGAATGAGG GAGATAGAGATAGAGAAGACAGCTTCTTCGTCATCATCATCATGGAACAAAATTCACACAGCTCCATACTTCTCAAACCT CTCTAAAGTCTTTATAACTAAATGTCATGGTCTTAAGGATTTGACGTGGCTGTTGTTTGCTCCAAACCTTGCTTTTCTCC AAGTTAGTTTCTCAGGGCAATTAGAGGATATAATTAACCAAGAGAAAGCTGCGAGTGTTGAGAATGCAGCTACCATTGTT CCTTTTAGGAGACTAGAAACGCTGCACCTATCTGCTTTACGTGGGCTCGAGAGAATCTATTGGAATGCTCTGCCGTTTCC ATGTCTGAAAGTTATCCACGTTGAAAAATGTTGGAAGCTAAGAAAGCTTCCTTTGGATTCTAATAGTGGCGCCGGGGGTA AAGAACTGGTCCTAAGTTATGGAGACAGAGAATGGATAGAAAAGCTTGAATGGGAGGACCAAGCCACTCGAGTTCGTTTC TTAACTTCGTGCAGGTGGCACTGGCGAGCAACACAATGA |
| AA seq | Len:893 aa MGGCFSVSLPCDQVVNQFSQWLCLRGRYIHNLPENIVALQHAMAMLTAKLDDVLRTVGREEFTGRQQRISQVQVWHANVL TTKNKVDDLLSTYEAELQRLCLCGFCSKDLKLSYLYGKNVSIMLTEVEKRSSQGDFDMVVEAATFGEVDEIPIHPTIVGQ ERMLEKAWTLLMEDGSGMLGMYGMGGVGKTTLLTQINNKFSEISDRFEVVIWVVVSKSATVRKIQRDIAQKVGLVEMGSG EKDENQRALDIYNVLRRRKFALLLDDIWEKVDLKAVGVPYPTRDNGCKVAFTTRSRDVCGRMGVDDPMEVSCLQPDESWD LFQRTVGENTLGSHPDIPELARKVARKCRGLPLALSVIGETMACKRTVHEWCHAVDVLTSSATEFSGMEDEILPVLKYSY DNLSGEMVRSCFLYCSLFPEDYHIDKERLVEYWICEGFVSEKESRERTLNQGYEIVGTLVRACLLMEERKDKSYVKMHDV VREMALWISSDFGNQKERCVVRAGVGLREVPKLKEWATVRKMSLMNNGIEEIFDSHECGDLTTLFLQRNAFVKISGEFFR CMPHLAVLDLSENHSLEELPEEISELGSLRYLDVSYTCVNQLPVGLWELKKLIHLNLEHMIRLGSVSGISSLWNLRTLGL RGLVLDMRQVNELELLEHLQVVTIDISSPSVVKPLLWSHRLVVCIREVDFKYLEEESMRVLTLPTIVNLRRLSIKRCGMR EIEIEKTASSSSSSWNKIHTAPYFSNLSKVFITKCHGLKDLTWLLFAPNLAFLQVSFSGQLEDIINQEKAASVENAATIV PFRRLETLHLSALRGLERIYWNALPFPCLKVIHVEKCWKLRKLPLDSNSGAGGKELVLSYGDREWIEKLEWEDQATRVRF LTSCRWHWRATQ* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0006952 |
| Pfam | Leucine rich repeat |
| KEGG | disease resistance protein RPS5-like; K13459 disease resistance protein RPS2 (A) |