Names & Information
Knowledge of BnaA09G0083800NO:
| Gene Name | BnaA09G0083800NO |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaA09g11650D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance protein RML1A OS=Arabidopsis thaliana GN=RLM1A PE=3 SV=1 |
| NT seq | Len:3132 nt ATGGCTTCTTCCTCTTCTTCTTCTTCTCGGCCACGCACATGGACATACCGCGTCTTCACGAGCTTCCATGGACCAGACGT CCGTAAAACCTTTCTCAGTCATCTACGCAAACAGTTTAACAACAATGGGATTTCGATGTTCGACGATCAAGCGATCGAGA GAGGCCGAACTATTGCCCCTGAACTCATACGAGCCATTAGGGAGTCGAGGATCTCGATCGTGGTGCTCTCTAAGTACTAT GCCTCTTCAAGCTGGTGTTTAGATGAACTGGTGGAGATTTTCAAGTGCAAAGAAGATAATAACCAAATAGTGATGACTGT TTTTTACGGTGGAGTAGATCCATCCGATGTGCATAAACAAACAGGAGATTTTGGGAAAGTTTTCAAGAAAACTTGTGCTC GTAAAACCGAAGAGGAGAGGCGTAAATGGAGTCAAGCTTTGACCGATGCTGGCAACATAGCCGGTGAACACTTCCTTAAC TGGGACAACGAAGCGGAGATGATTGAAAAGATTGCTAGAGATGTCTCAAACAAACTAAATGCTACAATCTCTAGGGATTT TGAAGATATGGTGGGTATTGAAGCACATCTGGAAAAGATGCAGTCTTTGTTACATTTAGATGACGAGGATGGAGTGATGC TTGTTGGAATCTGTGGCCCTGCTGGAATTGGCAAGACTACAATTGCCAGAGCTTTATATAGCCGACTCTCTAGCAGTTTC CAGCATTCTGGTTTTATGGAGAATCTAAGGGGAAGCTGTAACAGTGCTCTTGATGAGTATGGATTGAAGCTGCGTTTACA AGAGCTACTTCTTTCAAAGATTCTAAACCTAAATGGTATCAAGATAAACCATTTAGGTGTGATGCCGGAAAGGCTATGTG ACCAAAAAGTTCTTATCATTCTTGATGATGTGGACGATCTGCAGCAACTTGAAGCTTTGGCTAATGACACTAGCTGGTTT GGTCCTGGAAGCAGGATTATAGTAACCACAGAAGATCAAGAGCTTTTGGAGCAAAATGATATCCATAATATATACCATGT GGACTTTCCACCTATAGAAAATGCTCGTAAGATCCTTTGTCGATATGCTTTTAAAGTGAGCTTGGCACCATATGGTTTTG AAAAGCTAGCCGAAAGAGCAACGGAGCTTTGTAGTAACCTTCCATTGGGTCTCCGTGTCATGGGTTCAATTTTACGCGGA AAGAAAAAAGATCACTGGAAAAGTTTTTTGCATAGGATAGAAAAGAGCAGTATAACAAAGATCGATGCAGTAATTAGAGT TGGATTTGATAATTTACATGAGAACGATCAAACTCTATTTCTCCTCATTGCAGTCTTCTTCAATTACGCATACGATGATC ATGTGAAAGCAATGCTCGCGGACAGTAACTTGGATGTCAGATTTGGGTTAAAAACCCTCGCCAATAAATCTCTCATACAG GTATCGACAAAAGGAAAAATAGTGATGCACAAGTTACTACAACAAGTGGGTATACAAGCAATTCAAAGACAAGAGCCTTG GAAACACCAAATCCTAATTGATACTAATGACATTAGCTACGTCCTTGAAAATGAGTTTGGCAGTAGAAGTTTGATGGGGA TATGTCTTGATATATCTACAATCAAAGACAGCATAGAAATAAGCCCAAAAGCTTCGAAAAGAATGCGCAATCTTCAATTT CTCAAGATCTACAATTCAAGACAGGATACAAATGTTAGAATGCATCTACTTGAGGACATGGATTTTCCACCTCGTCTGAA GTTATTACATTGGGAGGAATATCCAGAAAAGTGTCTTCCTCATACCCTTAGGCCGGAAAATCTTGTGGAACTCAATTTAG AAAATAGCAAGCTCAGGCATTTGTGGAAAGGAACCCAGCCCATTGGAAATTTCAAGAAGCTGAATTTGACAGCGTCTTAT AATTTGGAGGAACTCCCGGATCTTGGGAATGCTACAAATCTCGCGATTTTGGATGTGAGTGAATGCCAGAGTTTGTTAGA GATTCATCCCTCTGTTGGAAATCTTCATAAACTAGAGAAGTTGGAGATGAATTTATGTAGAAACCTACAAGTTGTTCCGA CTCTTTGCAACTTGGCATCTCTAGAAATATTCGGTATAGCGGGATGCGACCAATTAAGGAAACTTCCAGATATTTCCGCG ACCATTACAAGTCTCTCAATCGTAGACACGATGTTAGAAGAATTTAGTGCATCAATTAGGCTCTGGTCTCGTCTTGAGAC TCTCATGATAGTTGGCAGTTTCTTTCCAAATCAACTTTTGACACATCCACATCTGGTAAAACTGACGCTAGAGAGAAGTG GCGCAGATATTGAGATAATTCCAGATTGCATCAAAGATCTTCATGGGCTAAGAGATTTTTTTATAATTGGATGTCCAAAA CTTGTATCACTGCCAAAGCTTCCAAAGTCGCTCACACAACTACTGGTATTGAACTGTGAATCACTGGAGACACTAGTACC TTTCCCTTCCGACTCTCACATTGAAGATATTTATTTCCTTGACTGCTTCAAATTGGGTCCAGAAGCAAGGAGGGAAATTA TCCAGAAATCTTGGTGGGCATGCTTACCTGGAAGAGATATACCTGCAGAGTTCAATCACCGGGCTATAGGAAACTCCTTG ACCATTAGTTCAAAAGCCTACGGATTTAAGATGTGTGTCATCGTTTCTCCTAAATCAGAGATGGAAGATGCTAATGATAT AGAACTAATGTGCCGCATAAGCATAAGTGGTTTCCCCGTGAAGAATTCCAAAATTTCTCTTTCCTCTCGTTTTTCCTCTC GAGTCCAATCAGAACATCTGTTTTTATTGTACGCGAATAAGCTTAGGGAAGACGACAAAGTTGAACAGTACAGTGAGACA TTGTTCGAATTCAGCAGTTCATCCCAGGACATCGAAATTATCGAATGTGGTGTCCAGATCGTGGTTGAAGAAACCAATTC AGAACAACTGTTGGACAACGACGATGGAAGTCTCTCTGATGAGGGCTTTGAGTTGGATGAATCACGAGTAGAGACCGATG ATGATTTGCATAGGAGCCTTGAGTATGATGCATCACGACTAGAGACGGATGATGGTTTATTTGCTCCCACTTTTTTTTCC TTCGGTTTTTGA |
| AA seq | Len:1044 aa MASSSSSSSRPRTWTYRVFTSFHGPDVRKTFLSHLRKQFNNNGISMFDDQAIERGRTIAPELIRAIRESRISIVVLSKYY ASSSWCLDELVEIFKCKEDNNQIVMTVFYGGVDPSDVHKQTGDFGKVFKKTCARKTEEERRKWSQALTDAGNIAGEHFLN WDNEAEMIEKIARDVSNKLNATISRDFEDMVGIEAHLEKMQSLLHLDDEDGVMLVGICGPAGIGKTTIARALYSRLSSSF QHSGFMENLRGSCNSALDEYGLKLRLQELLLSKILNLNGIKINHLGVMPERLCDQKVLIILDDVDDLQQLEALANDTSWF GPGSRIIVTTEDQELLEQNDIHNIYHVDFPPIENARKILCRYAFKVSLAPYGFEKLAERATELCSNLPLGLRVMGSILRG KKKDHWKSFLHRIEKSSITKIDAVIRVGFDNLHENDQTLFLLIAVFFNYAYDDHVKAMLADSNLDVRFGLKTLANKSLIQ VSTKGKIVMHKLLQQVGIQAIQRQEPWKHQILIDTNDISYVLENEFGSRSLMGICLDISTIKDSIEISPKASKRMRNLQF LKIYNSRQDTNVRMHLLEDMDFPPRLKLLHWEEYPEKCLPHTLRPENLVELNLENSKLRHLWKGTQPIGNFKKLNLTASY NLEELPDLGNATNLAILDVSECQSLLEIHPSVGNLHKLEKLEMNLCRNLQVVPTLCNLASLEIFGIAGCDQLRKLPDISA TITSLSIVDTMLEEFSASIRLWSRLETLMIVGSFFPNQLLTHPHLVKLTLERSGADIEIIPDCIKDLHGLRDFFIIGCPK LVSLPKLPKSLTQLLVLNCESLETLVPFPSDSHIEDIYFLDCFKLGPEARREIIQKSWWACLPGRDIPAEFNHRAIGNSL TISSKAYGFKMCVIVSPKSEMEDANDIELMCRISISGFPVKNSKISLSSRFSSRVQSEHLFLLYANKLREDDKVEQYSET LFEFSSSSQDIEIIECGVQIVVEETNSEQLLDNDDGSLSDEGFELDESRVETDDDLHRSLEYDASRLETDDGLFAPTFFS FGF* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |