Names & Information
Knowledge of BnaA09G0110000NO:
| Gene Name | BnaA09G0110000NO |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: probable disease resistance protein RXW24L [Brassica rapa] |
| Best Hit (SwissProt) | Putative disease resistance protein At1g58400 OS=Arabidopsis thaliana GN=At1g58400 PE=3 SV=1 |
| NT seq | Len:2790 nt ATGTCTGGGGAACTTGTGTCATTTGCAATAGAAAAGCTATGGGACCTACTGAGCCATGAATACGAACAATTTAAGGGAGT TGAAGATCAAGTTAATGAGCTAAAAACTGATCTAAACACGTTAAAGTCATTTTTGAAAGATGCAAACGCAAAAAAGCATA CAGATGAAGTGGTGAGAAGCTGTGTGGAAAGGATCAATGAGATTGTTCTTGACGCTGAAGATACAATTGAACGCACTCGT CTAAAAGATGTACTCGGAAAACGTGGTATTGCGCGCTTTGTTCCGGAACGCAGGAATATTGCATTAGAAATTAGAAGCTT AAGTGAGGAGATCAAGAAAGCAGTTCGTGATATGAAAGATTTTAAGGTACACCAGAGAATTGACGATGTAAAGGATCCAC AACCTTCTCCACAAAGACAAGAATATCCAAAAATTCACGAAGGCAATCTTGTGGGGATGGAAGCAAATGTTAAGACATTA CTAGGATATTTGGTGGAGCAAGATGATATTCAAGTTGTTTCCATAACCGGGATGGGTGGTGTTGGGAAAACCACCCTTGC TAGACAAGTTTTTCATGACAACCTTGTTAAAAAGAAGTTTGATAGACTCGCATGGGTCTGTGTTTCCCATGTTTGTGATC ATATCAAAGTGTGGCAAGCAATCTTGCAGAATTTCAGATCCAAAGAACAGCAAAAGGAAATCCAGAAGATGACAAGAGCT GCCCTCCAAGGCGAACTCTTTGAACTATTAGAAACATCAAACTCGTTAATCGTATTAGATGACATATGGAATAAAAAAGA TTGGGACTTGATCAAGCGAATATTTCCACACAAAGCAGGTTCGAAGGTGCTACTTACTTCTCGAAATGAACGAGTCGCAG GACCTGGAGAAACATATAAAGACTTTAAACCAGAATGCCTATCTGATCAAGACAGTTGGACACTTTTCAAAAGTATAGCG ATGCCCAGAAAAGATGCATCTGAAATGACTCCAGATGATAAGGAGATGGAAAAGATGGGAAAGAAAATGATGGAACATTG TCGGGGATTGCCTTTGGCTATCAGAGTGTTAGGGGGATTGCTGGCTGAGAAATACACAATTCACAACTGGGAACGGTTAT CTGAGAATATTAGATCTCATCTCGTTGGTGGAACCAGTGACGACAACAATAATTCGCTTAACCATATATTGTCTCTAAGC TTTGAAGAGTTGCCTGTTTATCTGAAGTTATGCTTCCTCTACCTAGCCCATTTTCCAGAAGATTATGAAATAAATGTTGA AGATCTGTCTTATTACTGGGCTGCAGAAGGAATACTTAAGTATGGAACTGGAGACAGCAATCGAGATAACAGCATTGGAG TTGTTGGAGATAATTACATATGGGAGTTGGTGAGAAGAAATATGGTTATATCCGAAATAGACAAAACCACTGGGAGATTT GAGACATGCCGTTTGCATGACTTGATGAGAGAAATTTGTTTGTATAAAGCCAAAGAAGAGAATTTCCTACATACTGTTGG TGTCAGCTCTCCGACTTCACACTATCAGTCACGGAGGTTTGTCTCACATGATCCGACTACATTGAATGTTGAGAAAGATA TTAGTAATCCAAAGGTTCGATCTCTAGTGGTTTTCTGGAAGTCGGATTTGTATTCATTATTGGCTGAAGATAATTTATTT CGGGTTGTTCCAGAAGATACGTCCATTGATACATTTGATAAAAAGGATGGAGCACTTTGGAGCCTTTCGGATTTAGGCTT AACAAGGTTGGAACTTTTGAGAGTACTACATCTTCCTGGAGCCAAATTTGAAGAAAGGAAGTTATCTGATAGCATTGGAG AGCTCATACACTTAAGATATCTGAACTTAGAAGGTGCGTGGGTATCTCATCTTCCCTCTTCTCTACAAAATCTAAAGCTG CTGATCTATCTAAATTTAAATGTAACTGGGCGTTCTCATTTACTCACGCACACCTACTTGTTGGGAATGGAAGAATTGAG ATACCTTGCATTACCAAGGTGTAGGCGAAAGAAGAGAAAGTTGGAATTAAATCATCTAGTAAACTTGGAGACCTTGGTTA ATTTCTCAACGGAGTACTGCGATTTAGAGGATCTTCGTGGTATGGCCAGATTGAGGACTCTTGGAATCAAGATAACTGAT GAGACCAGCTTAGAAACTCTTTCTGCATCGATACATGGATTGAGACACCTGGAAAATCTTGATATAGTATACGAAGGGGC TAAGGGGACGAAAGAAGGACGAGTGCCTATGGGGACTAACAAATGGAGCACTCTATTGGAATTTGATAAACTCAACAAGC TGAAGTTGAGTACAAATATTCCTTTGCTCTCTGATGAACTACAGTTCCCTTCTCGCCTAACAAGCCTGTATCTATTCGGG AGTGGTTTGAAGGAGGACCCAATGTGGATTCTAGAGAAGCTGGTGCATCTGAAAGAGGTTAAATTAGGGAGTGGATCTTT CAGTGGGAGGAGAATGGTTTGCTCGAGGGGTGGGTTTCCTCAGTTGCAGAAGCTATATTTAGGGGAGCTAGAGAAGTTGA AAGAGTGGATAGTAGAAGAAGGCTCCATGCCCCTTCTTTATACTCTCTCTATAGATAATTGCAAAAAACTAAAGGAGTTT CCTGTTGGGCTGCCATTCATCACTTCCTTAAAGTATTTGAGAGTTGAAAACATGGGAGAGGAATGGAAGAAAAGATTGTC CGAAGGAGGAGAAGATTACTACAAAGTCCAACACATCCCTTCTGTTGAAATCATGCATATAATATTTTAA |
| AA seq | Len:930 aa MSGELVSFAIEKLWDLLSHEYEQFKGVEDQVNELKTDLNTLKSFLKDANAKKHTDEVVRSCVERINEIVLDAEDTIERTR LKDVLGKRGIARFVPERRNIALEIRSLSEEIKKAVRDMKDFKVHQRIDDVKDPQPSPQRQEYPKIHEGNLVGMEANVKTL LGYLVEQDDIQVVSITGMGGVGKTTLARQVFHDNLVKKKFDRLAWVCVSHVCDHIKVWQAILQNFRSKEQQKEIQKMTRA ALQGELFELLETSNSLIVLDDIWNKKDWDLIKRIFPHKAGSKVLLTSRNERVAGPGETYKDFKPECLSDQDSWTLFKSIA MPRKDASEMTPDDKEMEKMGKKMMEHCRGLPLAIRVLGGLLAEKYTIHNWERLSENIRSHLVGGTSDDNNNSLNHILSLS FEELPVYLKLCFLYLAHFPEDYEINVEDLSYYWAAEGILKYGTGDSNRDNSIGVVGDNYIWELVRRNMVISEIDKTTGRF ETCRLHDLMREICLYKAKEENFLHTVGVSSPTSHYQSRRFVSHDPTTLNVEKDISNPKVRSLVVFWKSDLYSLLAEDNLF RVVPEDTSIDTFDKKDGALWSLSDLGLTRLELLRVLHLPGAKFEERKLSDSIGELIHLRYLNLEGAWVSHLPSSLQNLKL LIYLNLNVTGRSHLLTHTYLLGMEELRYLALPRCRRKKRKLELNHLVNLETLVNFSTEYCDLEDLRGMARLRTLGIKITD ETSLETLSASIHGLRHLENLDIVYEGAKGTKEGRVPMGTNKWSTLLEFDKLNKLKLSTNIPLLSDELQFPSRLTSLYLFG SGLKEDPMWILEKLVHLKEVKLGSGSFSGRRMVCSRGGFPQLQKLYLGELEKLKEWIVEEGSMPLLYTLSIDNCKKLKEF PVGLPFITSLKYLRVENMGEEWKKRLSEGGEDYYKVQHIPSVEIMHIIF* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0006952 |
| Pfam | NB-ARC domain |
| KEGG | POPTRDRAFT_554585; disease resistance family protein; K13457 disease resistance protein RPM1 (A) |