Names & Information
Knowledge of BnaA09G0139300QU:
| Gene Name | BnaA09G0139300QU |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: putative disease resistance protein At4g11170 [Brassica rapa] |
| Best Hit (SwissProt) | Disease resistance protein RML1A OS=Arabidopsis thaliana GN=RLM1A PE=3 SV=1 |
| NT seq | Len:2607 nt ATGGCTTCTTCTTTTTCTTCTCTTCTCACCTGGAGATACCGCGTTTTCACGAGCTTCCACGGACCAGACGTGCTTAAGAC ATTTCTCAGTCATTTGCGCAAACAGTTCACCTTCAATGGGATTACGATGTTTGATGATCAAGGGATCGAGAGAGGTCAGT GCAAAGAAGATATGGGACAAATCGTGATGACGGTCTTCTACGGAGTAGATCCTTCTCATGTGCGGAAACAGACTGGAGAT TTTGGGAAAGCTTTCAAAGAAACATGTGCTCGTAAAACAAAGGAGAAGGAGGAACGATGGAGTCAAGCTTTAGAGTATGT GGGCAACATAGAGGGAGAACACTTCCTAAACTGGGTCAATGAAGCAGATATGATTGAGAAAATTGCTACCGATGTTTCAA ACAAACTGAATGCAACACCAGCTAAGGATTTTGATGGCATGGTGGGATTTGAAGCTCATCTAAGACAAATGGAGTCTTTG CTCGATTTAGATAATGATGGAGTTAAGATGGTAGCAATCACGGGACCTGCAGGGATTGGTAAGAGTACCATTGCCCGAGC GTTGCATAATTTATTGTCTAATAGGTTTCAGCTTTCTTGTTTTGTGGACAACCTTAGAGGAACCTATCCTATTGGTTTGG ATGAGTATGGTTTGAAGTTTCATTTACAAGAAGAGTTGCTTTCAAAGACTTTGAACCAAAATAGATTGAGAATATGCCAT TTAGGTGTGATAAAAGAAAGGCTACACGACCAGAGAGTGCTCATCATTTTTGATGATGTGAACAATATAAATCAACTGGA GGCGTTGGCTGGAGATATTTCTTGGTTTGGTCCTGGAAGTAGGGTTGTAGTCACCACAGAAAACAAAGATCTTCTACAGC AACATGGTATTAACAATACCTACCATGTGGAGTTTCCATCTAGAGGAGAAGCTCTTGAGATCCTCTGTAAATATGCTTTT AGACAAAGCTATCCACATGATCATTTTGAAGAGCTTGCACTAAAAGTAACTGAGCTTTGTGGTAATCTTCCATTGGGTCT ACGTGTGGTGGGTTCATCTTTACGCGGGAAGAAGGTGGACGAATGGGAAGACGTGATGGACAGACTAGAAACTATTCTTG ATCATCAAGATATCGAGCAAGTACTAAGAGTCGGTTATGAGAGTTTACATGAGAAAGAGCAATCTCTATTTCTCCACATT GCAGTCTTCTTCAACCGTAATGATGCTGATCTTGTGAAAGCCATGTTTGCTGACAACAACCCGGATATCAAACATGGGTT GAAAATTCTAGCAAACAAATCTCTTATATATTTATCTGAAGATGGGGAAATAGTGATGCACAAGTTACTACAACTTGTGG GTACAAAGGTCGTTAATAAAGAAAAACCTTGGAAACGTCGGATTTTAACAGACGCTCAAGTGATTTGTGATGTTCTTGAA CGTGCCAAAGGTACTAGAGATGTGTCAGGCATATCATTTGATATATATGACATCCATGAAGTATTTATAAGCCCTAAAGC TTTTAAAAGGATGCCTAATCTACGATTCCTCAAAATATACACAAGTAAATATGATGGAAATGATATATTGCATATACCTG AGGAGATGGCGTTTCCGCGTTGTCTGAGGTTACTACATTGGGAGGCATGCCCTAGCAAGAGTCTTCCTCTTGGATTTTGC CTGGAAAATCTTGTGGAACTCCATATGCCACACAGCCACCTCGAAACGCTCTGGGAAGGAACACAGAGACTTACAAATCT GAAGAAGATGGATTTGTCTTGGTCATTTAATTTAAAGGAACTCCCGGATCTTTCAAATGCTGCCAGTCTCGAGAGACTGG AACTGTTTTGTTGCAAGAGTTTGGTAGAGATTCACTCCTCTATTGGAAATCTTCACAAAATTGATTTCTTGCAAATGAGT TACTGTACAAAGCTACAAGTTGTTCCGGCTCTACTCAATTTGGCACCTCATGCTTATGTCAGCATGGAGGGATGCTCACA GTTGAGATTGCATCAAAGAATTGCATGGGCTAGTATCGCTTTGGTATCTCTGCCTTTTGACTCTGAATTCATCTGCAATA TCAACAACTGCTTCAACTTGGGCCGAGATTCAAGGACAGTAATAAAGAAATCATTAGGGGCATGCCTACCTGGAAGTTCT ATACCTGCAGAGTTTAATCACAAGGCTGTAGGAAACTCCTTGACTATCCGGTCAGATTTCAGAGAATTTAGGTTTTGCGC TGTGGTTTTCCCTAAACAGAAGATTATAGAAAGTTATCCTGAGTTGTTCTGTCGCATTCGTGTAAACAAGGGGTGCCCCA CTGACCATAATATGTATATGCATCTCCGTAGTATCCTAGTGGAACATCTATGTTTTTCTTATGCTGATTTGGTTGAGGTA CATGGATGGCTCGAACAGGAGAATGAGATAATGTTTGAGTTCATCACATGCCAGGACCTCGACATTATTGAATGTGGTGT CCAGATCATGACAGAGGAAAGCGAGAGAAGAAGAAGGATTGAGTTTGATGACGCCAGCAAAGCTTCTCAAGACAGTGAAC TTACGGACCGACTAATCTGCTACCCGAAACAGAAAAACAATAGCTAA |
| AA seq | Len:869 aa MASSFSSLLTWRYRVFTSFHGPDVLKTFLSHLRKQFTFNGITMFDDQGIERGQCKEDMGQIVMTVFYGVDPSHVRKQTGD FGKAFKETCARKTKEKEERWSQALEYVGNIEGEHFLNWVNEADMIEKIATDVSNKLNATPAKDFDGMVGFEAHLRQMESL LDLDNDGVKMVAITGPAGIGKSTIARALHNLLSNRFQLSCFVDNLRGTYPIGLDEYGLKFHLQEELLSKTLNQNRLRICH LGVIKERLHDQRVLIIFDDVNNINQLEALAGDISWFGPGSRVVVTTENKDLLQQHGINNTYHVEFPSRGEALEILCKYAF RQSYPHDHFEELALKVTELCGNLPLGLRVVGSSLRGKKVDEWEDVMDRLETILDHQDIEQVLRVGYESLHEKEQSLFLHI AVFFNRNDADLVKAMFADNNPDIKHGLKILANKSLIYLSEDGEIVMHKLLQLVGTKVVNKEKPWKRRILTDAQVICDVLE RAKGTRDVSGISFDIYDIHEVFISPKAFKRMPNLRFLKIYTSKYDGNDILHIPEEMAFPRCLRLLHWEACPSKSLPLGFC LENLVELHMPHSHLETLWEGTQRLTNLKKMDLSWSFNLKELPDLSNAASLERLELFCCKSLVEIHSSIGNLHKIDFLQMS YCTKLQVVPALLNLAPHAYVSMEGCSQLRLHQRIAWASIALVSLPFDSEFICNINNCFNLGRDSRTVIKKSLGACLPGSS IPAEFNHKAVGNSLTIRSDFREFRFCAVVFPKQKIIESYPELFCRIRVNKGCPTDHNMYMHLRSILVEHLCFSYADLVEV HGWLEQENEIMFEFITCQDLDIIECGVQIMTEESERRRRIEFDDASKASQDSELTDRLICYPKQKNNS* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0000166 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |