Names & Information
Knowledge of BnaA09G0139500QU:
| Gene Name | BnaA09G0139500QU |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: putative disease resistance protein At4g11170 [Brassica rapa] |
| Best Hit (SwissProt) | Disease resistance protein RML1B OS=Arabidopsis thaliana GN=RLM1B PE=2 SV=1 |
| NT seq | Len:1596 nt ATGGCTTCTCTTACTTCTTCATTGTCGACTCGCAACTGGAGTTACAATGTCTTTGCGAGCTTTCACGGGCCTGATGTCCG TAAAACACTTCTCAGCCACATGCGTGAACAGTTTAATGTCAGTGGGATCACTATGTATAATGATCAAAAGATGGTGAGAA GCGAAGAGATAGCTCCTTCACTCACAAATGGTATAAGAGAATCTAGGATCGCGATTGTGATTCTCTCCAAGAAATATGCT TCTTCAAGCTGGTGTTTGGATGAATTGGTGGAGATATTGGAGTGCAAAAAAACTATGGGACAGAAAGTGATGACCATCTT CTATGGAGTGGAGCCATCTGATGTACGGAAACAGACCGGGGAATTCGGGATCGCTTTCGAGGATACTTGTGAACATAAGA CAAAGGAAGCAAAGCAGAAATGGATCAAAGCTTTGACTGATGTGAGCAACATTGCTGGAGAAGACTTCCTAAGATGGGAA AACAATCATAGTGGTTTTGATGAACATGGTTGGAAGCTGCGTTTACAGGAGCAATTTCTTTCAAATCTTTTGAATCTTGG TAGAATTAGGATAGGCCATTCTGGTGTGATAGAAGAAAGGCTATCCAAGCATAGGGTGCTCATCATTCTTGATGATGTGT ACCATATAAAGCAATTAGAAGCGCTAGCAAATAAAACTACATGGTTTGGTTCTGGAAGCAGGATTATAATTACCACAGAA AACAAAGAGATTTTGCAGCAACATGGTATCAAAAATATGTACCGTGTGGGGCTTCCATCTGATGAACAAGCGCTCAAGAT CTTATGCAGATATGCTTTTGGAAACAACTCTCACAACCAGGGTTTTGAAAAGCTTGTACCAAGAGTGACAAAGCTTTGTG ATAAGCTTCCGTTGGGTCTAAGTGTTGTGGGCTCATCTTTGCGTGGGAAGGAGGCGGATGAATGGGAAGAGGTACTGAGC AGGCTGGAAACTAATCTTGATCGAGATAGCGGAACTATTCTTGATCGAGATATTGATGACGTACTAAGAGTTGGCTACGA GAGTTTAGATGAGAATGAGCAAACGCTATTTCTCCACATTGCAGTCTTCTTCAACTATAAAAGTTGGAATCTCGTGAACA CCATGTTTGATGATAGTGACTTGGATGTCAAACATGGGTTGAAGATCCTTGTAAACAGATCTCTCATCAAAGAGACCATT GGATATGAGCATAGAATAGTGATGCACAGATTACTAGAACAAATGGGTAAAAGAGCCATTCAAAAACAAGACCCTTGGAA ACGCCGGATCTTGACGAATGCTCGAGAGATTTGTGATGTTCTTCAACATGCCAAAGAGCTCGAGATTATTGCATGTGGTG TCCAGATCATGACGGAGGAAAACAAGAGAAGAAGAATGATTGAGTTTGATGAAACTAGCAAAGCCTCTCAAGACTCTAGA GACAGTGAGCTTATGAGGGATCGACTAATCTGCGATTCAAAAGAGAATGGCAAAGCCGAGACACATACAGGTTGTTGGAG CTGGATCCTCCTCTCCTTGGACCTCTCCCATCCTATGAGAAGCATTGCAAGCTTATTTTGGGGAAGAAGACCATAG |
| AA seq | Len:532 aa MASLTSSLSTRNWSYNVFASFHGPDVRKTLLSHMREQFNVSGITMYNDQKMVRSEEIAPSLTNGIRESRIAIVILSKKYA SSSWCLDELVEILECKKTMGQKVMTIFYGVEPSDVRKQTGEFGIAFEDTCEHKTKEAKQKWIKALTDVSNIAGEDFLRWE NNHSGFDEHGWKLRLQEQFLSNLLNLGRIRIGHSGVIEERLSKHRVLIILDDVYHIKQLEALANKTTWFGSGSRIIITTE NKEILQQHGIKNMYRVGLPSDEQALKILCRYAFGNNSHNQGFEKLVPRVTKLCDKLPLGLSVVGSSLRGKEADEWEEVLS RLETNLDRDSGTILDRDIDDVLRVGYESLDENEQTLFLHIAVFFNYKSWNLVNTMFDDSDLDVKHGLKILVNRSLIKETI GYEHRIVMHRLLEQMGKRAIQKQDPWKRRILTNAREICDVLQHAKELEIIACGVQIMTEENKRRRMIEFDETSKASQDSR DSELMRDRLICDSKENGKAETHTGCWSWILLSLDLSHPMRSIASLFWGRRP* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | NB-ARC domain |
| KEGG | hypothetical protein; K19613 leucine-rich repeat protein SHOC2 (A) |