Names & Information
Knowledge of BnaA09G0139600QU:
| Gene Name | BnaA09G0139600QU |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: putative disease resistance protein At4g11170 [Brassica rapa] |
| Best Hit (SwissProt) | Disease resistance protein RML1B OS=Arabidopsis thaliana GN=RLM1B PE=2 SV=1 |
| NT seq | Len:3006 nt ATGGCGTCTGCTTCTTCCTTTGCGTCTCGCAACTACAAGTTCAACGTCTTCTCGAGCTTCCACGGGCCTGACGTCCGTAA AACACTTCTCAGTCACATGCGCGAGCAATTTAAACGCAGCGGGATCACAATGTTTAATGATCAAGAGATTGTGAGAAGCC AAGAGATATCTCCTTCGCTCACAAATGGTATAAGAGAATCAAAGATCTCGATCGTGATTCTCTCCAAGAAATACGCTTCT TCAAGCTGGTGTTTAGATGAATTGGTGGAGATACTGAAGTGCAAGGAAACTATGGGACAGATAGTGATGACCATCTTTTA CGGAGTGGAACCATCCGATGTACGCTTCCAGACCGGCGATTTTGGGATCGCTTTCAATGAAACTTGTGCAGATAAGCCGG ACGAGGAACGGCAGAAGTGGAGCAAAGCTTTGAAAGACGTAGGAAACATTGCTGGAGAAGACTTCCAAAAATGGGATTTT GATGGCATGGTGGGACTTGAAACTCATTTAAGGGAAATAGAAAATTTGCTAGATTTTGATTATGATGGAGTAAAGATGGT TGGAATCTCAGGTCCTGCAGGGATTGGTAAGACAACCATTGCCAGAGCCTTACATAGTCGTTTCTCTCATAAGTTTCAGC TTACTTGTTTTACGGAAAACCTTAGGGGAAGCTATCATAGTAGTGGTCTTGATGACTATGGTCTGCAGTTGCTTTTACAA GAACAACTTCTGTCAAAGGTTTTGAACCAAGATGGTACAAGGATATGCCATCTAGGTGTGTTACAACAAAGGCTAAGTAA CATGGGAGTGCTCATCATTCTTGATGATGTAACCAGTCTAAAGCAATTAGAGGCTTTGGCCGGAGATACTTCATGGTTTG GTTTTGGAAGTAGGATTATCGTAACCACTGAAGATCAAGAGCTTTTGCAACAACATGGTATCGATAATGTATACCATGTG AGTTTTCCATCTATCGATGAAGCTCTTGAAATCTTGTGTAGATATGCTTTCAAACAATGCTATCCTACAGAGGGTTTTAA AAAGCTTGCTATAAGGATAACAGAACTTTGTTGCAAGCTTCCGTTGGCTCTTCGTGTTGTGGGTTCATCTCTACGTAGGA AGAGGAAGGACGAATGGACAGATGTAATGGTCAGGCTAGAAAATATTCTGGATCAAGATATCGAGAAAGTGTTAAAAGTC GGCTACGAAAGTTTAGAAGACAATGAGCAAACACTATTTCTCTATATTGCAATCTTCTTCAAGTATAAAGATGGTGATCT TGTGAAAGCCATGCTGGCTGGAATTGACTTGGATGTTAAAAACGGGTTGAAAATCCTAGTAAAAAAATCTCTCATAGAGA TATCTGCACGTGGTGAAATAGTTATGCACAGATTACTACAACAAGTGGGTAAAAGAGCTATTCGTAGACTAAAAAAGCCT TGGAATCGCCAAATCTTAGTTGATGCTAATGACATATGTGACGTCCTACGAAATGATACTGTTACTAGCAAAGTAGTTGG CATATCATTTAATACATCAGCAATCAACGAAGTGTTCATAAGCAAGGGAGCTTTCAAAAGAATGCCTAATCTCAGGTTCC TCAAAGTTATCAAAAGTAAATATGATGGGTGTGATAGAATGGATATATCTGAAGAGATAGAGCTTCCGCAACGTCTAAGG TTTCTACATTGGAAGGCATACCCAAGCAAGTGTCTTCCTGCTACATTTCATACGGAATGTCTTGTCGAACTTGATCTCCG AGATAGCCAATTAGAAAAGCTTTGGGAAGGAATCCAGCCGCTTACAAATCTCAAGCGGATGGATTTGTGTAATTCCTACC ATTTGAAGGAACTCCCAGACCTTTCAAATGCTCCAAATCTTGAGAAACTGAAACTGGGTGGTTGCCAGAGTTTGATAGAA CTTCCCCCCTCTACTTCAAATCTTGGTAAACTAAATTACTTGTGTATGATTTCCTGCACAAAGCTAGAAGTTGTTCCAAG TAACTGCACCTTTGCGTCCCCTAATCCCATTGACATACAAATATCGCGTACGAACATGACAACATTCGGTATGTCAGACC CAGCGGCAAAAGAAGTGCCTCCAGTGACTACCCTTTCGATTTCTCGTGAGTTCTCTCTTTGTCTAAGCGAAAATCCAAAT CTGAAGACACTAACACAACTGCCGGCTACTATAACTACACTAGACCTAAGCTTCTCTGGTATTGAAACAATATGCTGCCT CAGAGGTTTTGACATGTTAAGAGAAATTACACTCTTTGACTGCACAGAACTCAAATCACTGCCAGAGCTCCCTTGTTTTC TCAAGTATCTATGCGCAGATGATTGTGAATCACTGGAGACCGTTTCTTGCCCTTTGGTGACACCATTTGCGAATCTCAGT TTCACCAACTGCTTCAAACTGGGCCAACAAGCACGAAATGAAATTGCCAACCAACGCTTTCATCTGCTTCAGTTGGGGTG GTCATGGTTACCTGGAACCCAAGTCCCCGCAGGGTTCGAGCACCGAGCTATAGGAAATACCTTGAGCTTCCCTATCTCCG CACTCTCCATCTTTAAGGTCTGCCTCGTTTGTTCCTCTAACAACCTAGCTGATATATATGATAAGTACTACTTGTCTTGT CGCTGGATACGCAAAGGCTACTCAAACTCCTTCCAGGCTATCGAGATATGTGGATTCTTCATCTCATCATATCAACACAA GCATCTCTTAGTTTTTCCCTCCTACTTACTTCTCAAGTACGGATGCTTTGAAGAGAGCGGAGAGCTAACGTTTGAATTCA GCAGCGACATCAACGACTTCGACGTTATTGAATGTGGTGTCCATATCTTCAAGCAGGAATTCGACGGAAGCAACAATGGA GGTTCTGGCGACGAAGATGGTGACAGTAACCACTGGAATACACAGGACACGAGATCCGAATGTGGACCCAGCGATGATGA AGATGTTGGGATTGTGAAATCCCGTGTCCAACTCTATATTATCTGA |
| AA seq | Len:1002 aa MASASSFASRNYKFNVFSSFHGPDVRKTLLSHMREQFKRSGITMFNDQEIVRSQEISPSLTNGIRESKISIVILSKKYAS SSWCLDELVEILKCKETMGQIVMTIFYGVEPSDVRFQTGDFGIAFNETCADKPDEERQKWSKALKDVGNIAGEDFQKWDF DGMVGLETHLREIENLLDFDYDGVKMVGISGPAGIGKTTIARALHSRFSHKFQLTCFTENLRGSYHSSGLDDYGLQLLLQ EQLLSKVLNQDGTRICHLGVLQQRLSNMGVLIILDDVTSLKQLEALAGDTSWFGFGSRIIVTTEDQELLQQHGIDNVYHV SFPSIDEALEILCRYAFKQCYPTEGFKKLAIRITELCCKLPLALRVVGSSLRRKRKDEWTDVMVRLENILDQDIEKVLKV GYESLEDNEQTLFLYIAIFFKYKDGDLVKAMLAGIDLDVKNGLKILVKKSLIEISARGEIVMHRLLQQVGKRAIRRLKKP WNRQILVDANDICDVLRNDTVTSKVVGISFNTSAINEVFISKGAFKRMPNLRFLKVIKSKYDGCDRMDISEEIELPQRLR FLHWKAYPSKCLPATFHTECLVELDLRDSQLEKLWEGIQPLTNLKRMDLCNSYHLKELPDLSNAPNLEKLKLGGCQSLIE LPPSTSNLGKLNYLCMISCTKLEVVPSNCTFASPNPIDIQISRTNMTTFGMSDPAAKEVPPVTTLSISREFSLCLSENPN LKTLTQLPATITTLDLSFSGIETICCLRGFDMLREITLFDCTELKSLPELPCFLKYLCADDCESLETVSCPLVTPFANLS FTNCFKLGQQARNEIANQRFHLLQLGWSWLPGTQVPAGFEHRAIGNTLSFPISALSIFKVCLVCSSNNLADIYDKYYLSC RWIRKGYSNSFQAIEICGFFISSYQHKHLLVFPSYLLLKYGCFEESGELTFEFSSDINDFDVIECGVHIFKQEFDGSNNG GSGDEDGDSNHWNTQDTRSECGPSDDEDVGIVKSRVQLYII* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0000166 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |