Names & Information
Knowledge of BnaA09G0139800QU:
| Gene Name | BnaA09G0139800QU |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: putative disease resistance protein At4g11170 [Brassica rapa] |
| Best Hit (SwissProt) | Disease resistance protein RML1B OS=Arabidopsis thaliana GN=RLM1B PE=2 SV=1 |
| NT seq | Len:3195 nt ATGGCTTCTCTTACTTCTTCATTGTCGACTCGCAACTGGAGTTACAATGTCTTTGCGAGCTTTCACGGGCCTGATGTCCG TAAAACACTTCTCAGCCACATGCGTGAACAGTTTAATGTCAATGGGATCACTATGTATAATGATCAAAAGATGGTGAGAA GCGAAGAGATAGCTCCTTCACTCACAAATGGTATAAGAGAATCTAGGATCGCGATTGTGATTCTCTCCAAGAAATATGCC TCGTCAAGCTGGTGTTTGGATGAATTGGTGGAGATATTGGAGTGCAAGAAAACTATGGGACAGATAGTGATGACCATCTT CTATGGAGTGGAGCCATCTGATGTACGGAAACAGACCGGGGAATTCGGGATCGCTTTCGAGGATACTTGTGAACATAAGA CAAAGGAAGCAAAGCAGAAATGGATCAAAGCTTTGACTGATGTGAGCAATATTGCTGGAGAAGACTTCCTAAGATGGGCA AATGAAGCAGACATGATCAAGCAAATTGCCAGAGACGTTTCAGATAAACTCAATGCTACACCGTCTAGAGACTTTGATGG CATGGTGGGACTTGAACCTCACATAAGAGAATTGAAGTCTTTACTAAAATTAGATGATAATGGAGTTATGATGGTTGCAA TCACTGGTCCTGCGGGAATTGGTAAGACCACCATTGCTAGGGCTTTACAAAGTCAAATCTCTAATAGGTTTCAGCTTACT TGTTTTGTGGACAACCTTAGGGAAAACAATCATAGTGGTTTTGATGAACATGGTTGGAAGCTGCGTTTACAGGAGCAATT TCTTTCAAATCTTTTGAATCTTGGTAGAATTAGGATAGGCCATTCTGGTGTGATTGAAGAAAGGCTATCCAAGCATAGGG TGCTCATCATTCTTGATGATGTGTACCATATAAAGCAATTAGAAGCGCTAGCAAATAAAACTACATGGTTTGGTTTTGGA AGCAGGATTATAATTACCACAGAAAACAAAGAGATTTTGCAGCAACATGGTATCAAAAATATGTACCGTGTGGGGCTTCC ATCTGATGAACAAGCGCTCAAGATCTTATGCAGATATGCTTTTGGAAACAACTCTCACAACCAGGGGTTTGAAAAGCTTG TACCAAGAGTGACAAAGCTTTGTGATAACCTTCCGTTGGGTCTAAGTGTTGTGGGCTCATCTTTGCGTGGGAAGGAGGCG GATGAATGGGAAGAGGTACTGAGCAGGCTGGAAACTAATCTTGATCGAGATAGCGGAACTATTCTTGATCGAGATATTGA TGACGTACTAAGAGTTGGCTACGAGAGTTTAGATGAGAATGAGCAAACGCTATTTCTCCACATTGCAGTCTTCTTCAACT ATAAAAGTTGGAATCTCGTGAACACCATGTTCGATGATAGTGACTTGGATGTCAAACATGGGTTGAAGATCCTTGTAAAC AGATCTCTCATCCAAGAGACCATTGGATATGAGCATAGAATAGTGATGCACAGATTACTAGAACAAATGGGTAAAAAAGC CATTCAAAAACAAGACCCTTGGAAACGCCGGATCTTGATGAATGCTCGGGAGATTTGTGATGTTCTTCAACATGCCAAAG GTACATGGAATGTTCTTGGTATATCGTTTGATATATCAAGAATCAACGAACTATCCATCAGCAAGAAAGCTTTTAAAAGA ATGACTGATCTCCGATTCCTCAAAATTTACAAAAGACAATATGACGGGAATGATAGAATGCATATACCGGAGGAGATTCA GTTTCCGTGCGGACTAAGGTTACTAGATTGGGAAGCTTATCCGAGCAAGTGTCTTCCTCCTACGTTCAATCCTCAATATC TTGTTGAACTCAGTATGAAGAATAGCAAGCTCGAGAAGCTATGGGAAGGGATCAAGCCGCTTGCAAATCTCCAGAAGGTG GATTTTTCAGGATCTGTTCATTTGAAGGAACTTCCCGATCTTTCAAATGCAACAAATCTTGAGAAGTTGGATCTAATAGG CTGCGAGAGCTTGGTAGAGATTCCATCCTCTTGTTCAAATCTTCACAAACTACAGAAGTTGTGGGTGAGTGGATGCATAA ACCTACAAGTAATTCCAGCTCGCATGAACTTGGCATCCCTTGATGAAGTATTCATGAGAGGATGCTCAAGGTTGAAAAAC ATTCCAGTCATGTCAACGAACATCAGAAAACTGTGTATATCGGAGACAGCTGTTGAAGATGTGCCTGCATCAACTAAGCT GTTGACACGTCTTACGTCTCTCAGTATAAACAAAGGTGGAAAGCTCAAGAGATTAACATATCTCCCCAAGAATGTCACAG ATCTAGACCTAAGCTATTCCGATATTCAAAAGATTTCAGATAGTATCAAAGCCCTTCATCAGCTACGGAACCTTAATCTA GCTGGCTGCACAAGACTCGCGTCACTACCAAAGCTCCCTGGCTCGGTCAAAACCATAATAGCGGAAGACTGTGAGTCACT GGAGACCGTATCTAGCTCTTTGAACACTCCAAACGCGCGGCTCAATTTCATCAACTGCTTCAAACTGAGTCAACAAGCAA GAAGAGCAATTTTTAAACAAGCTTTCTTTATAGGAGTGGCACTCTTACCAGGAAGAGAAGTACCAGCAGAGTTCGATCAC CGAGGCAGAGGAACCTCATTGACTATTCGTCCTGACGGTAACCCTTACAGCGGCTTTGTGGTTTGCGTCGTGATTTCCCC TAAGCAGCAAGAGTTTAGTTTTTCCCAGCTAAAGTGTCGTCGCATAGGCGTAGCTCAAGATGACTTCTATCCAGTTGAAA TGTTGGTCTACGTGGGCGAAGTCCACAAGTTCCGAAGGGAGCATCTATTTGTATTCGACTCTCGGTTTCTAGAGTTCTAC CCATCTGATATGAGCAGAGAGATAGTACTCGAACTGAGCAGCAACTCCAACGATTTCGATATTATTGACTGTGGTGCCAG GATCTTGACCGACGAGAATGGGAGCAATGAATGTGGCTTAAACGACCAAGTGTTAGAAGAAGAAACTGAGCTTGAATCCA GGGAAGCCTTTGAAGATAGCATCGAACATACAAATGAAGTAGTCTGTTACTCGGAAGAAGTGGACGGTGGAAAACGTACT GATTGTTGGAGTTGGCTCTTTCTCTGCTTCGGTCTCTCCCATTTGACTAGATTTGTTTCGGGAAGAAGACGATAA |
| AA seq | Len:1065 aa MASLTSSLSTRNWSYNVFASFHGPDVRKTLLSHMREQFNVNGITMYNDQKMVRSEEIAPSLTNGIRESRIAIVILSKKYA SSSWCLDELVEILECKKTMGQIVMTIFYGVEPSDVRKQTGEFGIAFEDTCEHKTKEAKQKWIKALTDVSNIAGEDFLRWA NEADMIKQIARDVSDKLNATPSRDFDGMVGLEPHIRELKSLLKLDDNGVMMVAITGPAGIGKTTIARALQSQISNRFQLT CFVDNLRENNHSGFDEHGWKLRLQEQFLSNLLNLGRIRIGHSGVIEERLSKHRVLIILDDVYHIKQLEALANKTTWFGFG SRIIITTENKEILQQHGIKNMYRVGLPSDEQALKILCRYAFGNNSHNQGFEKLVPRVTKLCDNLPLGLSVVGSSLRGKEA DEWEEVLSRLETNLDRDSGTILDRDIDDVLRVGYESLDENEQTLFLHIAVFFNYKSWNLVNTMFDDSDLDVKHGLKILVN RSLIQETIGYEHRIVMHRLLEQMGKKAIQKQDPWKRRILMNAREICDVLQHAKGTWNVLGISFDISRINELSISKKAFKR MTDLRFLKIYKRQYDGNDRMHIPEEIQFPCGLRLLDWEAYPSKCLPPTFNPQYLVELSMKNSKLEKLWEGIKPLANLQKV DFSGSVHLKELPDLSNATNLEKLDLIGCESLVEIPSSCSNLHKLQKLWVSGCINLQVIPARMNLASLDEVFMRGCSRLKN IPVMSTNIRKLCISETAVEDVPASTKLLTRLTSLSINKGGKLKRLTYLPKNVTDLDLSYSDIQKISDSIKALHQLRNLNL AGCTRLASLPKLPGSVKTIIAEDCESLETVSSSLNTPNARLNFINCFKLSQQARRAIFKQAFFIGVALLPGREVPAEFDH RGRGTSLTIRPDGNPYSGFVVCVVISPKQQEFSFSQLKCRRIGVAQDDFYPVEMLVYVGEVHKFRREHLFVFDSRFLEFY PSDMSREIVLELSSNSNDFDIIDCGARILTDENGSNECGLNDQVLEEETELESREAFEDSIEHTNEVVCYSEEVDGGKRT DCWSWLFLCFGLSHLTRFVSGRRR* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |