Names & Information
Knowledge of BnaA09G0139900QU:
| Gene Name | BnaA09G0139900QU |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: putative disease resistance protein At4g11170 isoform X2 [Brassica rapa] |
| Best Hit (SwissProt) | Disease resistance protein RML1B OS=Arabidopsis thaliana GN=RLM1B PE=2 SV=1 |
| NT seq | Len:3180 nt ATGGCTTCTTCTTCCTCATCTACGTCTCGCAACTACAGCTACAATGTCTTTGCGAGCTTCCACGGTCCTGACGTCCGTAA AACACTTCTCAGTCACATACGTGAACAGTTTACCCGCAGCGGGATCACTATGTTTGATGATCAGGAGATTGTCAGAAGCG CAACCATCGCCCCTTCTCTCACAGAAGCTATAAGAGAATCGAGGATCTCGATTGTGATTCTCTCCAAGAACTATGCTTCG TCAAGCTGGTGTTTAAATGAAATGGTGGAGATATTGGAGTGCAAGAAAGCTATGGGGCATATAGTCATGACAATCTTCTA CGGAGTGGATCCTTCCGATGTACGGAAACAAACCGGGGAATTCGGGATAGCTTTCAATGAAACTTGTGCAAGTAAAACAA AGGAGGAGAAGCAAAGATGGAGACAAGCTTTGAACGAAGTGGGTAACATTGCTGGAGAAGACTTCTTAAGATGGTCAAAT GAAGCAAAAGTGATCAAGAAAATTGCCAGAGATGTTTCAGATAAACTGAATGCTACACCGTCTAGGGATTTTGATGGCAT GGTTGGACTTGAACCTCATCTGAGAGAAATGGAGTCTTTGTTAGATTTTGATGATGATGGAGTTAAGGTGGTCGCAATCT CTGGTCCTGCAGGCATTGGTAAAACTACCATTGCTAGAGCAGTACATAGCTTGCACTCTTATAGGTTCCAACTTACTTGT TTTGTTGACAACCTTAGGGTAAGCCATCCCATCAGTTTTGATGAGTATGGTTTGAAGTTGCATTTACAAGAAGAGTTTCT TTCAAATATTTTGAAACAAGATGGTATTAGGATATGCCATTTAGGTGTGATAGAAGAAAGGCTACACGACCAGAGAGTTC TCGTCATTCTTGATGATGTGAACAATATAAAACAATTGGAGGCGTTGGCTGGAGATATTTCTTGGTTTGGTCCTGGAAGT AGGGTTGTGGTTACCACAGAAAACAAAGATCTTCTGCATCAACATGGTATCAACAATACCTACCATGTGGGGTTTCCATC TACAGGAGAAGCTCTTGAGATCCTGTGTAGATATGCTTTTAGGAATAGCTATCCACATGATGGTTTTCAAGAGCTTGCAT TAAAAGTAACTGACCTTTGTGGTAACCTTCCGCTGGGTCTACGTGTGGTGGGTTCATCTTTACGTGGGAAGAAAGAAGAC GAATGGGAAGATGTAATGAAGAGGTTGGAATCTGTTCTTGATCGAGATATTGAGGAAGTACTAAGAGTGGGCTATGAAAG TTTAGATGAGAATGAGCAAACGCTATTTCTCCACATTGCAGTCTTCTTCAACTATGAAAACGGTAATCTTGTGAAAACCA TGTTCGCTGACAGTGACTTGGATGTCAAATACGGGTTAAAAGTCCTTGAAAACAGATCTCTAATAGAGTTATATAACAAG AAGGAAACAATAAATATGCACAGATTACTACAACAAGTGGGTATAAAAGCAATCCATAAACAAGAGCCTTGGAAACGTCG GATCCTGATAGATGCTGCGGAGATATGTGATGTTCTTGAACTCGCCAAAGGAACTAGATTTGTCTCCGGTATATCATTTG ATATATCTGATATCGATGAAGTATCTATAAGCCCAATAGCTTTTAAAAGAATGCCAAAACTTCGATTCCTCAGAGTTTAC GAAAGCAAAGAAGGTGGGAATGATGTAATTCATGTACCTGAGGAGATGGAGTTTCCGTGTCGTCTAAGATTACTAGAGTG GAAGGCATACCCAAACAAGTATCTTCCTCCTACCTTTCATCCTGAATATCTTGTGAAACTTGATATGCAAGGTAGCCAGC TAGAGTACCTCTGGCAAGGAACCCAGCCGCTTACAAATCTCAAGGAGATAGATTTGCAGAGGTCTTTTCATTTGAAAGAG CTCCCTGATCTCTCAAATGCTACAAATCTTAAAGGAATGTATCTAAGTTATTGCCAGAGCTTGGTAGAGTTTCCACCCTC TTGTTCAAGTCTTGATAAACTAAAGGATTTGTGGATGGATCACTGCACAAACCTACAAGTCATTCCAGCTCACATGAAAT TGGCATCTCTTAAACGCGTCAGTATGAAAGGATGCTCAAGACTGAGACATATTCCATTGATGTCAACCAACATTAGGCAG ATGGATATATCAGAGACGGCGGTTGAAGATGTGCCTGCATCAGCCAGCATTTGCGCTCGTCCTATGATTTACTCCATGAT CGGCTGCCAAAGGCTTAAGGAAATAACACATCTCCCTCTATATGTAACTGAACTAGACCTAAGAAAATCTTCTGTTGAAA AGATTCCAGATTGCATCAAAGATCTTCGTCTATTACTTAAGCTAAAGATCTCTGGATGCAGAAAACTAACGTCATTGCCA GAGCTTCCTTCTCAGCTCATGCTCCTATCTGCAAACGACTGTGAGTCACTCGAGGAAGTTGCTTCCCCATTTCACAACCC GAATGCGAATATGTCTTTCACCAACTGCTTCAGATTGCGACAACAAGCAATTATCCAACAATGGTTCTGTCTCGGGTCTG CTTTCTTGCCAGGAAGACAAGTACCTCCAGAGTTCGATCACCGAGCTAGAGGATGTTCCTTAACACTTCCTCAGTCTGCT TGCACCAGATTTAAGGTTTGCCTCGTGCTCTTACCAAACAATAAAATCAAGGAAGATAGATCTTCACTACTGTTATGTCG TCGCGTGGTCAACGGCGACTTGGCAAACTCTGATGACAAGTCGTTCTACTTCAACATATCCAGATGTCGAGCGGAACATC TTTTTATATTTCCCTCTGGTTTGTTTGAAGAAGATGAAGGCCTTCCTGATGAAGTTCACAGAGAGATAGTGTTCGAGTTC AGCAGCAAATACAACGACTTCGACGTTGTTGAATGTGGTGCCAAGTTCTTGACAGACGAAAACAGCTATGAATCTGAATC AGACCAAGCAGCGACGACAATAGCCTCGTTCATGGGAGCTATGAATGTGGATCCAACGCCAATAATAGCAGCATTGATGA GATATGAGTCCATGATGGCCGAACAGAGCGATGAAAGAGCTACGGTCCAACTATTCATAGTGAATGTGGATAACCAACAC ACAACTAGTTGTTGCCGCAATATCTCCTCCCTAGTCAGTTCTGTATATTCTCGATACTAA |
| AA seq | Len:1060 aa MASSSSSTSRNYSYNVFASFHGPDVRKTLLSHIREQFTRSGITMFDDQEIVRSATIAPSLTEAIRESRISIVILSKNYAS SSWCLNEMVEILECKKAMGHIVMTIFYGVDPSDVRKQTGEFGIAFNETCASKTKEEKQRWRQALNEVGNIAGEDFLRWSN EAKVIKKIARDVSDKLNATPSRDFDGMVGLEPHLREMESLLDFDDDGVKVVAISGPAGIGKTTIARAVHSLHSYRFQLTC FVDNLRVSHPISFDEYGLKLHLQEEFLSNILKQDGIRICHLGVIEERLHDQRVLVILDDVNNIKQLEALAGDISWFGPGS RVVVTTENKDLLHQHGINNTYHVGFPSTGEALEILCRYAFRNSYPHDGFQELALKVTDLCGNLPLGLRVVGSSLRGKKED EWEDVMKRLESVLDRDIEEVLRVGYESLDENEQTLFLHIAVFFNYENGNLVKTMFADSDLDVKYGLKVLENRSLIELYNK KETINMHRLLQQVGIKAIHKQEPWKRRILIDAAEICDVLELAKGTRFVSGISFDISDIDEVSISPIAFKRMPKLRFLRVY ESKEGGNDVIHVPEEMEFPCRLRLLEWKAYPNKYLPPTFHPEYLVKLDMQGSQLEYLWQGTQPLTNLKEIDLQRSFHLKE LPDLSNATNLKGMYLSYCQSLVEFPPSCSSLDKLKDLWMDHCTNLQVIPAHMKLASLKRVSMKGCSRLRHIPLMSTNIRQ MDISETAVEDVPASASICARPMIYSMIGCQRLKEITHLPLYVTELDLRKSSVEKIPDCIKDLRLLLKLKISGCRKLTSLP ELPSQLMLLSANDCESLEEVASPFHNPNANMSFTNCFRLRQQAIIQQWFCLGSAFLPGRQVPPEFDHRARGCSLTLPQSA CTRFKVCLVLLPNNKIKEDRSSLLLCRRVVNGDLANSDDKSFYFNISRCRAEHLFIFPSGLFEEDEGLPDEVHREIVFEF SSKYNDFDVVECGAKFLTDENSYESESDQAATTIASFMGAMNVDPTPIIAALMRYESMMAEQSDERATVQLFIVNVDNQH TTSCCRNISSLVSSVYSRY* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |