Names & Information
Knowledge of BnaA09G0155600QU:
| Gene Name | BnaA09G0155600QU |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: putative disease resistance protein At4g11170 isoform X1 [Brassica rapa] |
| Best Hit (SwissProt) | Putative disease resistance protein At4g11170 OS=Arabidopsis thaliana GN=At4g11170 PE=2 SV=1 |
| NT seq | Len:2979 nt ATGACAGATCCTTCTTCATCTTCCTCAACCTCTTGGAGATACGATGTCTTCCCTAGTTTCAGAGGAGAAGACGTCCGTAA AAACTTTCTCAGTCACTTGCTCAAAGAATTTGAAAACAAGGGAATATTGACTTTCAGAGATGACCAGATCGAAAGAAGCC ATAGCATCGGTCCTGAGCTACTGGTTGAGATCTTGAAGTGCAAGGAAGAACAAGGACTCAAAGTGATGCCGATCTTTTAT AAAGTGGATCCATCTGAAGTAAGAAAACAAACCGGAAAGTTCGGAATGGGTTTCTTGAAAACATGTCACGGAAAGACGGA GGAGCAACAACAGAGTTGGAGGCAGGCGTTGACCGATGCTGCCAGTATTGTTGGCGACCATCCGCAAGATTGGGACAATG AAGCAGACATGATCACAACAATTGCCAAGGATGTATTAAATAAATTAAATGCGACACCATCAAGAGATTTCGAGGACTTA GTTGGAATTGAATCTCACATTGCAAGAATGAAGACTTTGCTATGCCTTGAGTCTCAAGAAGTGAGGTTAGTAGGGATATG GGGTCCTGCAGGCATTGGTAAAACCACTATAGCTAGAGCTTTATATAACCAATTTCATGAGAACTTCAAACTTTCTATCT TTATGGAGAACGTGAGTGAAAGTTATGGTGGAACTAACCTCGATAGCTATGGTTTAAAGCTGGGCTTACAACAAAGGTTT CTGTCAAAACTTCTTGATCAACACGGTTTGAGAATACGCCATTTAGGCGCAATAAAAGAAAGGCTTAAGAACCAGAAAGT CCTAGCCGTTCTTGATGATGTGAACAACATTGAACAACTCCAAGCTTTAGCAAAGGAAACTCAATGGTTTGGTAACAAGA GCAGAATCATAGTGACTACACGAAACAAACAACTTTTGATTTCACACAATATCAGCCATGTTTACAAGGTGCCTTTTCCA TCAAGAGAAGAAGCTCTTGCTATATTCTGCCAACACGCCTTCAGAGAATGCTATCCCTCGGATGATTTTAAGGATATTGC AATTGAATTTGCAACTCTTGCTGGTCATCTTCCGCTAGGTCTACGCGTTCTTGGTTCATTTATGAGAGGAAAAAGTAAGG AGGAGTGGGAAGTTTCTCTGCCTACACTAAAAACTAGACTCACTGGAGAGATCGAGAAACTATTAAAAGTCGGGTACGAG GGCTTACACAAAGATGACAAAGCTCTATTTCTTCACATTGCATGTCTTTTTAATGGTCATCATGAAACCTATGTGAAGCA GATGGTGGTAGCTAATAGTGACTTGGATGTTAGCTTTGGACTTAAAGTCTTGGCTGATCGGTCTCTCATACAAATATATG TGGATGGTAAAGTGGTGATGCACTCCTTGCTACGACAGTTGGGCAGAGAAGTTGTTCGCGAGCAATCTGTGGACGAGCCA GGAAAACGTCAATTCTTGATGAGTGCTAGAGAAATTTGTGGCGTTCTTTCGAATAATACTGGCACGGATTCTGTATTAGG TATGTCGGTAGATATGTGTGACCTCAACGAAGATTTTTATATAAATGAGAAAGCATTTGAAAATATGAGGAATCTTTTAT ATATAAGAATCTACAGAAGTAATGATGCAAATCCAAATAAAATGAAGTTACCAGATGACGGTCTAAGTTATCTGCCACAA CTAAGGCTATTGCAATGGGATGCGTATCCACACATGTTCTTGCCTTCTCGTTTCCGAACGGAATGTCTCGTGGAACTCAG CATGTCTCATAGCAAGCTTAAGACGCTATGGGGAGACAATGCTCAGCCGCTCAGAAATCTCAAGAATATGAATTTAAGCA ACTCTCCGAATCTTGAAAGCTTTCCAAATCTTTTGGAAGCAACAAAGCTGGAGAGATTGGATTTGAGTTGGTGTGAGTCT TTGGTGGAGCTTCCTTCTTCTATACAGAACCTTCATAAGCTGAGCTTGCTAGAGATGTCTTGTTGCACAAGTCTAGAGAT CTTACCAACCAACATAAACTTAGCTTCTCTATCTCGCCTCCACTTTAGAAATTGCCTTCGACTGAAAACGTTTCCAGAGA TTTCAACAAATTTAAATTATCTGAAAATAAAAGGCACCGCGATCACTGAGGTTCCTCCATCAGTCAAGTCCTGGCGTAGA ATTGAAGAAATTTGCATGGAAAGTACTGAGGTGAGGATATTAATGAATCTTCCTTATATTTTGGACACTCTATGTTTGAG GGGTAATACTAAACTGGTGGCTATCGCAAACTACCTCATAAGGCTACGTCGCCTGCGCATGATCGACATCTCTTTTTGCG TCAGTCTCGTGTATCTACCGAAGCTTCCGTACTCAGTACGCTATTTAACAGCTTTTAACTGTGAGTCCCTTCAAAGGTTA CATGGCCCTTTTCGTAACCCAAGCATCCGCCTCAAGTTCACTAATTGCTTGAAGCTAGATCATAACGCACAAGAAATGAT CCACCAATCTGTTTTTGATGTTGTTATCTTACCTGGCGGACAAGTGCCCGCATACTTCACTCACCGATATAATGGTAACA GTGGTTTTTATCATTTCACGTTCGATGGATCTGTCAGCTTCTATAGCTTTAAGGTATGTCTAGTGCTAGCAGCGGGTACG AGATTCGAAAGTTGTCACACATCTTTCTACACAAGCTTTCGTGGCGATCCGATAAAGAAGTATTACACATATATGTTGAA TCAGCCCCAGCTTAAAGTGGATCATATATGCATGTTTGAGTGTGTTTTGTCACCTGACTACGATGGTCCGCCGTATTTGG GAACTCGTCCTAGTACGACCAAATTGTTCAAGTTTGACTTCAATTGTAATTATGGCTGCAAAGTTCTGGAGTGTGGTGTA CTATTCTTGGAGGCTCGTAAATCTTTGATCGCTGCGAAAAGAGCCGAGTCTAGTTCCACATGTCCAAGGCCTGCTAAAAG ATCCAAGGCACAAGTGTGA |
| AA seq | Len:993 aa MTDPSSSSSTSWRYDVFPSFRGEDVRKNFLSHLLKEFENKGILTFRDDQIERSHSIGPELLVEILKCKEEQGLKVMPIFY KVDPSEVRKQTGKFGMGFLKTCHGKTEEQQQSWRQALTDAASIVGDHPQDWDNEADMITTIAKDVLNKLNATPSRDFEDL VGIESHIARMKTLLCLESQEVRLVGIWGPAGIGKTTIARALYNQFHENFKLSIFMENVSESYGGTNLDSYGLKLGLQQRF LSKLLDQHGLRIRHLGAIKERLKNQKVLAVLDDVNNIEQLQALAKETQWFGNKSRIIVTTRNKQLLISHNISHVYKVPFP SREEALAIFCQHAFRECYPSDDFKDIAIEFATLAGHLPLGLRVLGSFMRGKSKEEWEVSLPTLKTRLTGEIEKLLKVGYE GLHKDDKALFLHIACLFNGHHETYVKQMVVANSDLDVSFGLKVLADRSLIQIYVDGKVVMHSLLRQLGREVVREQSVDEP GKRQFLMSAREICGVLSNNTGTDSVLGMSVDMCDLNEDFYINEKAFENMRNLLYIRIYRSNDANPNKMKLPDDGLSYLPQ LRLLQWDAYPHMFLPSRFRTECLVELSMSHSKLKTLWGDNAQPLRNLKNMNLSNSPNLESFPNLLEATKLERLDLSWCES LVELPSSIQNLHKLSLLEMSCCTSLEILPTNINLASLSRLHFRNCLRLKTFPEISTNLNYLKIKGTAITEVPPSVKSWRR IEEICMESTEVRILMNLPYILDTLCLRGNTKLVAIANYLIRLRRLRMIDISFCVSLVYLPKLPYSVRYLTAFNCESLQRL HGPFRNPSIRLKFTNCLKLDHNAQEMIHQSVFDVVILPGGQVPAYFTHRYNGNSGFYHFTFDGSVSFYSFKVCLVLAAGT RFESCHTSFYTSFRGDPIKKYYTYMLNQPQLKVDHICMFECVLSPDYDGPPYLGTRPSTTKLFKFDFNCNYGCKVLECGV LFLEARKSLIAAKRAESSSTCPRPAKRSKAQV* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0000166 |
| Pfam | TIR domain |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |