Names & Information
Knowledge of BnaA09G0160000QU:
| Gene Name | BnaA09G0160000QU |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaA09g14320D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance protein RML1B OS=Arabidopsis thaliana GN=RLM1B PE=2 SV=1 |
| NT seq | Len:2994 nt ATGGTGTCTTCTTCTCGGAGCTGGAGATACAACGTCTTCCCGAGCTTCCACGGACCAGATGTTCGTGTAACATTTATGAG TCATTTAAAAAAGCAGTTTCAACACAACGGGATCATAGCGTTCAACGATGAAGGGATTGAGAGAAGCAAACTGATCGGTA CTGAACTCATACGGGCGATAAGAGAGTCAAGAATCTCAATCGTGGTGCTCTCGAAGAACTATGGTTCTTCAAGTTGGTGT TTGAATGAGCTGGTGGAGATTTTCAAGTGTCAAGAATCTGCGGGACGAATAGTGATGACGGTTTTCTACAAAGTGGATCC ATGTGATGTGAGGAAACAGATGGCAGAGTTTGGTAAGACTTTCAAGGAAACTTGCGAAGGGAAAACAGAGACCCAGGTGC ATAAATGGATTCACGCTTTGACCCGTGTCGCCAATATAGCCGGAGAACATTCTGTGAACTGGAACAATGAAGCAAAAATG ATTGAGAAGATTGCCTTAAATGTTTCAAACAATCTAAATGCTACACCATCTAGGGATTTTGATGGGATGGTAGGACTTGA AGGTCATTTGGGGAAGATTCAATCTTTGTTAATTTTAGAAAATGATGAACCTATGACCTTAGGAATCTCTGGTCCTGCGG GTATTGGTAAAACTACCATTGCAAGAGCTTTATACCACCAACTCTCTCCTGATTTTCCGCTTAGATATTTCATGGAAAAT GTTAGAGGAAGTTATAGGAATATTGGTTGTGGTGACCATGGTTCAAAGCTGCGTTTACAAGAACAGCTTCTTTTGCACAT ATTGAACCAAACCAATATGAATGTATGTCACTTAGATGTGATAAGTGAAAGGTTATGCAACCAAAAGGTTCTTATCGTTC TTGATGATGTAGATAGTCTTGATCAGCTGGATGCTCTAGCTAAAGATATATATCATTTTGGTTCCGGAAGTAGGATTATT GTGACTACGAAAGATCAAGAGCTTTTGGAAAGATATGGCATTACCAATACATACCATGTGGGTTTTCCATCTAATGGAGA AGCTCTTGAGATCTTCTGTAGATATGCTTTTAGAAGAAACTCTCCAAAATATGGTTTTGAAAAGCTGGCAATAAGAGTAA CAGAGCTTTGCGGTAATCTTCCCTTAGGTCTACGTGTTGTGGGCTCATCTTTAGGTGGGAAAAGTGGGGATGAATGGGAA GTTATTATCCATAGGCTAGAAACTAGTCTTGATGAAGATCTTGAGAGAGTATTAAGAGTCGGATATGAGACTTCGCATGA GAAAGATCAAGCTCTGTTTCTTCACATTGCTATATTTTTCAACAACAAAGACCAAGATTACGTAAAATCCATGCTCCATG ACTGTAATTTGAATGTTGAACATGGGTTGAGAAACCTAGTCAATAGATCTCTCATAGACATATCTACCAATGGAGAAATA GTGATGCACAACTTACTACAACAAATGGCTAGACAAGTCATTCAAAGACAAGAACCTTGGAAACGCCGCATTTTAATCGA TCCTCATGAGATTTGTGATATTCTTGAATATGAGACAGGGACTAGAACAGTGTGTGGCATATATTTCGATACATCAGAAA CAGGCGAAGTGTTTGTAAGCAAGGGAGCTTTAAAAAGAATGCGTAACCTTCAGTTCCTGACAGTCCACAAAAGAAAACAC TGTGAAAAAGACATAGTGTGCATACCTCAGGACTTGGAGTTTCCACCTCGTCTTAAGTTACTACATTGGGAGGTGTACCC AAGAAAGAGTCTCCCTATGAAATTTCATCTCGAAAATCTAGTCGAACTCCATATGCGCGATAGCCAGCTCGAGAAGCTCT GGGAAGGATCTCAGCCCCTCACAAATCTCAAGAAGATGGATTTGGCAATGTCCTGTCATTTAAAAGAACTCCCAGATCTT TCAAATGCAACAAATCTCGAGAGACTAAATCTGAATGACTGCGAGAGTCTGGTAGAGATTCCATACTCTTTTTCAAATCT TCACAAGCTAAAAGCGTTGAGCATGTTTGGCTGCACAAAGCTAGAAGTCATTCCAGCTCACATGAACTTGGCATCTCTTG AGTCGGTTGATATGACTGCATGCCAGAGATTGAGAAACTTTCCAGAGATCTCTAGGAACGTCGCAAAGTTCTCTATCTCA GTCGAGGAACTAGACCAAGTGCCTGAGTCTATCAGGCTTTGGTCTCGTCTTCATGTTCTCACCATAACCAGCAAAGGAAA ACTAAAGTCCTTAACACATCTTCCCCAAAGTGTAAGGCATCTACACCTAAGTTGCATTGGTGAGCAGATGATTCCATATT TCAAGAAAAGTCTCCAGCGGGTAGAACTTTATCTAAACAGCTGCAGAAGTTCACTAGTTAGGGGAAATTGTGAACTCAAG GAGGGACTTACTTGTCCTTATGACACTCCATACACGCAACTCAATTACACGAACTGCTTCAAACTGGACCGAGAAGCACG GACAGCAATTATAACAAAACATTTTGCTGAAGGCTGGGCTTGTTTACCTGGAGGAGAAGTGCCTGTAGAGTTCGATCACC GAGCCAAAGGAAATCGTGTGACCATACATCCCATGAGTAACATGTCTCTCACCATTTTCAAGGTTTGTGTGGTGATTTCT CCTAACCAGCAAACCAGAGAATCGGAACAACTAGCGTGTCGGCGTATAAGCAAAGGCATTGAGGAGATCAGTGTTTATGC TATTCCTAGGATTCAAAGAAAACATTTATTTCTATTTCCTTCATACTTATTGCAAGAAGCTACTAGCAGAGAGGTTGTGT TTGAATTCAGCGGTGGATTCAAGATTGTTGAATGCGGTGTCCAAATCTGGAAGGATGAATCAGAAAGAAACCAAAGTGAG GAAGAAGATGTCAGCAATAACCAGCAGGACACATATAACATCAGCAAAGCTTGGGAGGAAGAAGAAGCTGAGGAGTATGT GAATCTGAATCCAGCAAAGCGTACAAAGAGATGA |
| AA seq | Len:998 aa MVSSSRSWRYNVFPSFHGPDVRVTFMSHLKKQFQHNGIIAFNDEGIERSKLIGTELIRAIRESRISIVVLSKNYGSSSWC LNELVEIFKCQESAGRIVMTVFYKVDPCDVRKQMAEFGKTFKETCEGKTETQVHKWIHALTRVANIAGEHSVNWNNEAKM IEKIALNVSNNLNATPSRDFDGMVGLEGHLGKIQSLLILENDEPMTLGISGPAGIGKTTIARALYHQLSPDFPLRYFMEN VRGSYRNIGCGDHGSKLRLQEQLLLHILNQTNMNVCHLDVISERLCNQKVLIVLDDVDSLDQLDALAKDIYHFGSGSRII VTTKDQELLERYGITNTYHVGFPSNGEALEIFCRYAFRRNSPKYGFEKLAIRVTELCGNLPLGLRVVGSSLGGKSGDEWE VIIHRLETSLDEDLERVLRVGYETSHEKDQALFLHIAIFFNNKDQDYVKSMLHDCNLNVEHGLRNLVNRSLIDISTNGEI VMHNLLQQMARQVIQRQEPWKRRILIDPHEICDILEYETGTRTVCGIYFDTSETGEVFVSKGALKRMRNLQFLTVHKRKH CEKDIVCIPQDLEFPPRLKLLHWEVYPRKSLPMKFHLENLVELHMRDSQLEKLWEGSQPLTNLKKMDLAMSCHLKELPDL SNATNLERLNLNDCESLVEIPYSFSNLHKLKALSMFGCTKLEVIPAHMNLASLESVDMTACQRLRNFPEISRNVAKFSIS VEELDQVPESIRLWSRLHVLTITSKGKLKSLTHLPQSVRHLHLSCIGEQMIPYFKKSLQRVELYLNSCRSSLVRGNCELK EGLTCPYDTPYTQLNYTNCFKLDREARTAIITKHFAEGWACLPGGEVPVEFDHRAKGNRVTIHPMSNMSLTIFKVCVVIS PNQQTRESEQLACRRISKGIEEISVYAIPRIQRKHLFLFPSYLLQEATSREVVFEFSGGFKIVECGVQIWKDESERNQSE EEDVSNNQQDTYNISKAWEEEEAEEYVNLNPAKRTKR* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0000166 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |