Names & Information
Knowledge of BnaA09G0169400GG:
| Gene Name | BnaA09G0169400GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: probable disease resistance protein RXW24L [Brassica rapa] |
| Best Hit (SwissProt) | Putative disease resistance protein At1g58400 OS=Arabidopsis thaliana GN=At1g58400 PE=3 SV=1 |
| NT seq | Len:2778 nt ATGTCTGGGGAACTTGTGTCATTTGCAATAGAAAAGCTATGGGACCTACTGAGCCATGAATACGAACAATTTAAGGGAGT TGAAGATCAAGTTAATGAGCTAAAAACTGATCTAAACACGTTAAAGTCATTTTTGAAAGATGCAAACGCAAAAAAGCATA CAGATGAAGTGGTGAGAAGCTGTGTGGAAAGGATCAATGAGATTGTTCTTGACGCTGAAGATACAATTGAACGCACTCGT CTAAAAGATGTACTCGGAAAACGTGGTATTGCGCGCTTTGTTCCGGAACGCAGGAATATTGCATTAGAAATTAGAAGCTT AAGTGAGGAGATCAAGAAAGCAGTTCGTGATATGAAAGATTTTAAGGTACACCAGAGAATTGACGATGTAAAGGATCCAC AACCTTCTCCACAAAGACAAGAATATCCAAAAATTCACGAAGGCAATCTTGTGGGGATGGAAGCAAATGTTAAGACATTA CTAGGATATTTGGTGGAGCAAGATGATATTCAAGTTGTTTCCATAACCGGGATGGGTGGTCTTGGGAAAACCACCCTTGC TAGACAAGTTTTTCATGACAACCTTGTTAAAAAGAAGTTTGATAGACTCGCATGGGTCTGTGTTTCCCATGTTTGTGATC ATATCAAAGTGTGGCAAGCAATCTTGCAGAATTTCAGATCCAAAGAACAGCAAAAGGAAATCCAGAAGATGACAAGAGCT GCCCTCCAAGGCGAACTCTTTGAACTATTAGAAACATCAAACTCGTTAATCGTATTAGATGACATATGGAATAAAAAAGA TTGGGACTTGATCAAGCGAATATTTCCACACAAAGCAGGTTCGAAGGTGCTACTTACTTCTCGAAATGAACGAGTCGCAG GACCTGGAGAAACATATAAAGACTTTAAACCAGAATGCCTATCTGATCAAGACAGTTGGACACTTTTCAAAAGTATAGCG ATGCCCAGAAAAGATGCATCTGATGATAAGGAGATGGAAAAGATGGGAAAGAAAATGATGGAACATTGTCGGGGATTGCC TTTGGCTATCAGAGTGTTAGGGGGATTGCTGGCTGAGAAATACACCATTCACAACTGGGAACGGTTATCTGAGAATATTA GATCTCATCTCGTTGGTGGAACCAGTGACGACAACAATAATTCGCTTAACCATATATTGTCTCTAAGCTTTGAAGAGTTG CCTGTTTATCTGAAGTTATGCTTCCTCTACCTAGCCCATTTTCCAGAAGATTATGAAATAAATGTTGAAGATCTGTCTTA TTACTGGGCTGCAGAAGGAATACTTAAGTATGGAACTGGAGACAGCAATCGAGATAACAGCATTGGAGTTGTTGGAGATA ATTACATATGGGAGTTGGTGAGAAGAAATATGGTTATATCCGAAATAGACAAAACCACTGGGAGATTTGAGACATGCCGT TTGCATGACTTGATGAGAGAAATTTGTTTGTATAAAGCCAAAGAAGAGAATTTCCTACATACTGTTGGTGTCAGCTCTCC GACTTCACACTATCAGTCACGGAGGTTTGTCTCACATGATCCGACTACATTGAATGTTGAGAAAGATATTAGTAATCCAA AGGTTCGATCTCTAGTGGTTTTCTGGAAGTCGGATTTGTATTCATTATTGGCTGAAGATAATTTATTTCGGGTTGTTCCA GAAGATACGTCCATTGATACATTTGATAAAAAGGATGGAGCACTTTGGAGCCTTTCGGATTTAGGCTTAACAAGGTTGGA ACTTTTGAGAGTACTACATCTTCCTGGAGCCAAATTTGAAGAAAGGAAGTTATCTGATAGCATTGGAGAGCTCATACACT TAAGATATCTGAACTTAGAAGGTGCGTGGGTATCTCATCTTCCCTCTTCTCTACAAAATCTAAAGCTACTGATCTATCTA AATTTAAATGTAACTGGGCGTTCTCATTTACTCACGCACACCTACTTGTTGGGAATGGAAGAATTGAGATACCTTGCATT ACCAAGGTGTAGGCGAAAGAAGAGAAAGTTGGAATTAAATCATCTAGTAAACTTGGAGACCTTGGTTAATTTCTCAACGG AGTACTGCGATTTAGAGGATCTTCGTGGTATGGCCAGATTGAGGACTCTTGGAATCAAGATAACTGATGAGACCAGCTTA GAAAATCTTTCTGCATCGATACATGGATTGAGACACCTGGAAAATCTTGATATAGTATACGAAGGGGCTAAGGGGACGAA AGAAGGACGAGTGCCTATGGGGACTAACAAATGGAGCACTCTATTGGAATTTGATAAACTCAACAAGCTGAAGTTGAGTA CAAATATTCCTTTGCTCTCTGATGAACTACAGTTCCCTTCTCGCCTAACAAGCCTGTATCTATTCGGGAGTGGTTTGAAG GAGGACCCAATGTGGATTCTAGAGAAGCTGGTGCATCTGAAAGAGGTTAAATTAGGGAGTGGATCTTTCAGTGGGAGGAG AATGGTTTGCTCGAGGGGTGGGTTTCCTCAGTTGCAGAAGCTATATTTAGGGGAGCTAGAGAAGTTGAAAGAGTGGATAG TAGAAGAAGGCTCCATGCCCCTTCTTTATACTCTCTCTATAGATAATTGCAAAAAACTAAAGGAGTTTCCTGTTGGGCTG CCATTCATCACTTCCTTAAAGTATTTGAGAGTTGAAAACATGGGAGAGGAATGGAAGAAAAGATTGTCCGAAGGAGGAGA AGATTACTACAAAGTCCAACACATCCCTTCTGTTGAAATCATGCATATAATATTTTAA |
| AA seq | Len:926 aa MSGELVSFAIEKLWDLLSHEYEQFKGVEDQVNELKTDLNTLKSFLKDANAKKHTDEVVRSCVERINEIVLDAEDTIERTR LKDVLGKRGIARFVPERRNIALEIRSLSEEIKKAVRDMKDFKVHQRIDDVKDPQPSPQRQEYPKIHEGNLVGMEANVKTL LGYLVEQDDIQVVSITGMGGLGKTTLARQVFHDNLVKKKFDRLAWVCVSHVCDHIKVWQAILQNFRSKEQQKEIQKMTRA ALQGELFELLETSNSLIVLDDIWNKKDWDLIKRIFPHKAGSKVLLTSRNERVAGPGETYKDFKPECLSDQDSWTLFKSIA MPRKDASDDKEMEKMGKKMMEHCRGLPLAIRVLGGLLAEKYTIHNWERLSENIRSHLVGGTSDDNNNSLNHILSLSFEEL PVYLKLCFLYLAHFPEDYEINVEDLSYYWAAEGILKYGTGDSNRDNSIGVVGDNYIWELVRRNMVISEIDKTTGRFETCR LHDLMREICLYKAKEENFLHTVGVSSPTSHYQSRRFVSHDPTTLNVEKDISNPKVRSLVVFWKSDLYSLLAEDNLFRVVP EDTSIDTFDKKDGALWSLSDLGLTRLELLRVLHLPGAKFEERKLSDSIGELIHLRYLNLEGAWVSHLPSSLQNLKLLIYL NLNVTGRSHLLTHTYLLGMEELRYLALPRCRRKKRKLELNHLVNLETLVNFSTEYCDLEDLRGMARLRTLGIKITDETSL ENLSASIHGLRHLENLDIVYEGAKGTKEGRVPMGTNKWSTLLEFDKLNKLKLSTNIPLLSDELQFPSRLTSLYLFGSGLK EDPMWILEKLVHLKEVKLGSGSFSGRRMVCSRGGFPQLQKLYLGELEKLKEWIVEEGSMPLLYTLSIDNCKKLKEFPVGL PFITSLKYLRVENMGEEWKKRLSEGGEDYYKVQHIPSVEIMHIIF* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0006952 |
| Pfam | NB-ARC domain |
| KEGG | POPTRDRAFT_554585; disease resistance family protein; K13457 disease resistance protein RPM1 (A) |