Names & Information
Knowledge of BnaA09G0173600ZS:
| Gene Name | BnaA09G0173600ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaA09g14680D [Brassica napus] |
| Best Hit (SwissProt) | Putative disease resistance protein At1g58400 OS=Arabidopsis thaliana GN=At1g58400 PE=3 SV=1 |
| NT seq | Len:2781 nt ATGTCTGGGGAACTTGTGTCATTTGGAATACAAAAGCTATGGGACCTACTGAGCCATGAATACGAACAATTTCACGGAGT TGAAGATCAAGTTAATGAGCTAAAAACTGATCTAAAAACGTTAAAGTCATTTTTGAAAGATGCAGACGCAAAAAAGCATA CAAGAGAAGTGGTGCGAAACTGTGTGGAAAGGATCAATGAGATTGTTCTTGATGCTGAAGATACAATTGAAACCCTTATT TTAAAAGATGAACTCGGAAAACGTGGTAGCGTCAGAAGACTTGCGTGCATTGTTCCAGAACGCAGGAAGATTTCATCAGA AATTGGAAGCTTAAGTGAGAAGATCAAGAAAGCAGTTCGTGATATGAACGATTTTGGAGTACAACGGATTATTGACGATG GAAAGGATCCACAGCCTTCTCAACAAAGACTGGAATTTGCTAAAGTTAACGAAAGCAATCTTGTGGGGATGGAAGAAAAT GTTAAGACATTACTTGGATATTTGGTGGAGCGAGATGATGTTCAAGTTGTTTCCATAACCGGGATGGGTGGTCTTGGGAA AACCACCCTTGCTAGAAAGGCTTTTCATGACAACCTTGTTAAAAAGAAGTTTGATAGACTTGCATGGGTTTGTGTTTCCG AAATCTGTGATCGGATCAAAGTGTGGCAAGCAATCTTGCAGCATTTCAGATCCAAAGAAGAGCAAATTGAAATCCAGAAT ATGAAAGAAATCACACTCCAGGGTGAACTCATTGGAATGTTAGAAACATCAAACTCGTTAATCGTATTAGATGACATATG GAAAGAAGAAGACTGGGACATGATCAAGCCAATATTTCCACACAAACCAGGTTCGAAGGTGCTACTTACTTCTCGAAATG AAAGAGTCGCAGGACCTGGAGAAACATATATCAACTTTAAACCAGAATGCCTATCTGATCAAGACAGTTGGACACTTTTC CAAAGTATAATGCCCAGAAAAAATGCATCTGAATTGACTCCAGAGGATGAGGAAATGGAAAAGTTGGGTAAGAAAATGCT GGAACATTGTCTAGGATTGCCTTTGGCTGTCAAAGTGTTAGGAGGATTGTTGGCTAAAAATTACACAATTCACAACTGGA ATCGGTTATCTGAGAATATTAGATCTCATCTCATTGGTAGAACCAATGAAGACAAGAAGAATTCGCTTAACCATATATTG TCTCTAAGCTTTGAAGAGTTGCCTGGTTATCTGAAGTATTGCTTCCTCTACCTAGCCCATTTTCCAGAAGATTATGATAT ATATGTGGAAGATTTGTCCTATTTCTGGGCTGCAGAAGGAATACTTACGTATGAAACTGGAGACAGCATTCAAGATGTTG GAGATAATTACATAGAGGAGTTGGTGAGAAGAAATATGGTTATATCCGAAATAGACAAAACCACTGGGAGATTTGAGACA TGCCGTTTGCATGACTTGATGAGAGAAATTTGTTTGTGTAAAGCCAAAGAAGAGAATTTCCTACATATTGTTGGTATCAG CTCTCCGACTTTACACTCTCAGTCTCTTAATACACCACGGAGGTTTGTCTCACAGGATCCGAGGATCACAACATTAGATG TTGGGAGAGATATTAATTATTCAAAGGTTCGATCTCTAGTGGTTATCTGGAAGTCGAATTTTTGGTGCTCATTATTGGCT GATGGGATATTTATTCGGGGTGTTCTAAAAAATTGGCAAATTGATGCAATGGGAAGAAAAGATCAACTATTTTGGAGGGT TTCGAATTTAGGCTTTACAAGGTTGCAACTTCTGAGAGTATTACATCTTCCTGGAGCCAAATTTAAAGGAAGGAGGTTAT CTAATAGCATTGGAAAGCTCGTCCACTTAAGATATCTGAGCTTAGACGGTGCGCGGGTATCTCATCTTCCCTCTTCTCTA CAAAATCTAAAATTACTGATCTATCTAAATTTAAATGTAATTCGGTGTTCTCATTTACCCACGCTCACCTTCTTGTTGGG GATGAAAGAATTGAGATACCTTGAATTACCAAGGGGTAGGCGAAAGAAGAGAAAGTTGGAATTAAACCATCTACTAAACT TGGAGACCTTGAATAATTTCTCAACAAAGTACTGCGATTTAGAGGATCTTCGTGGTATGGCCAGATTGAGAACTCTTGGA ATCGATATAACAGATGAGACCAGCTTAGAAACTCTTTCTGCATCGATACATGGATTGAGACACCTGGAAAATCTTGATAT AGTGTATGACGGGGGTAAGGGGACGAAAGAATGGAGCACTCTATTGGATTTCAATAATCTCAAAAGGCTGAGGTTGATGA CAAGTATTCCTTTGCTCTCTCATGAACTACAGTTCCCTTCTCGCCTAACAAGCCTGTGTCTATCGGAGAATGGTTTGAAG GAGGATCCAATGCCGATTCTAGAGAATTTGAGTCAATTGGAAGATGTTAGATTATGGACTGAATCTTTCACGGGTAGGAG AATGGTTTGCTCAAGGGGTGGGTTTCCTAAATTGCAGAATCTTGAGTTAGAGGGACTGTATGAGTGGGAAGAGTGGATAG TAGAAGAAGGCTCCATGCCCCTTCTTAGCAATCTCTTGATTCACCATTGCAAGAACTTAAAGGAGCTTCCCGATGGGATG CGATTCATCACTTCCTTGGAGGATCTGAGTTTTGAAAATATGAGAGATGAATTGAAGGAGAGACTGTCGGAAGGAGGAGA AGATTATTACAAAGTCCAACACATCCCTTCCATTACATTGGACAAGCGACACATCAGGTAA |
| AA seq | Len:927 aa MSGELVSFGIQKLWDLLSHEYEQFHGVEDQVNELKTDLKTLKSFLKDADAKKHTREVVRNCVERINEIVLDAEDTIETLI LKDELGKRGSVRRLACIVPERRKISSEIGSLSEKIKKAVRDMNDFGVQRIIDDGKDPQPSQQRLEFAKVNESNLVGMEEN VKTLLGYLVERDDVQVVSITGMGGLGKTTLARKAFHDNLVKKKFDRLAWVCVSEICDRIKVWQAILQHFRSKEEQIEIQN MKEITLQGELIGMLETSNSLIVLDDIWKEEDWDMIKPIFPHKPGSKVLLTSRNERVAGPGETYINFKPECLSDQDSWTLF QSIMPRKNASELTPEDEEMEKLGKKMLEHCLGLPLAVKVLGGLLAKNYTIHNWNRLSENIRSHLIGRTNEDKKNSLNHIL SLSFEELPGYLKYCFLYLAHFPEDYDIYVEDLSYFWAAEGILTYETGDSIQDVGDNYIEELVRRNMVISEIDKTTGRFET CRLHDLMREICLCKAKEENFLHIVGISSPTLHSQSLNTPRRFVSQDPRITTLDVGRDINYSKVRSLVVIWKSNFWCSLLA DGIFIRGVLKNWQIDAMGRKDQLFWRVSNLGFTRLQLLRVLHLPGAKFKGRRLSNSIGKLVHLRYLSLDGARVSHLPSSL QNLKLLIYLNLNVIRCSHLPTLTFLLGMKELRYLELPRGRRKKRKLELNHLLNLETLNNFSTKYCDLEDLRGMARLRTLG IDITDETSLETLSASIHGLRHLENLDIVYDGGKGTKEWSTLLDFNNLKRLRLMTSIPLLSHELQFPSRLTSLCLSENGLK EDPMPILENLSQLEDVRLWTESFTGRRMVCSRGGFPKLQNLELEGLYEWEEWIVEEGSMPLLSNLLIHHCKNLKELPDGM RFITSLEDLSFENMRDELKERLSEGGEDYYKVQHIPSITLDKRHIR* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0006952 |
| Pfam | NB-ARC domain |
| KEGG | Disease resistance protein RPP8, putative (EC:3.1.3.16); K13457 disease resistance protein RPM1 (A) |