Names & Information
Knowledge of BnaA09G0196900GG:
| Gene Name | BnaA09G0196900GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaA02g23840D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance protein RRS1 OS=Arabidopsis thaliana GN=RRS1 PE=2 SV=1 |
| NT seq | Len:3825 nt ATGAGCGATCGCGAGAAGGATGAGCATATCGTCTGCATCAGGTGCTTAGAAGAGGTACGGTATTCCTTCGTTAGCCACCT CTCCGAAGCTCTCCGCCGGAAAGGCATAAAGGATGTGATCGTGGACGTAGTAGATAGCGACGATCTGTTTTCCAAAGAGT CCGAGTCAAAGGTTGAGAAAGCTAAGGTTTCTTTGCTGGTTTTGCCCGCCAACTGTGAGCCTACCAGAATATGCCGTGAT AAATTTGTCAAGGTTCTCGAGTGCGACCCGGTGGTGATTCCAGTGTTGTACGGGGACAGCCCATTTTACGGCGGCGAATG GCTTACCTCGCTGGGTTTGAATTTGATAGGCTTATCACCACTCCACCAATCTAGGGAGGAATGTAGTGACTCCATACTTG TAGAAGAGATTGTGAGAGACGTGTACGAGAAGCTCTTTCATATGGGACGAATTGGAATCTACTCGAAGCTGCTGGAGATT GAAACAATGGTTTGCAAGCAACCCCTGCGCACCCGCCTTGTTGGAGTTTGCGGTATGCCTGGCATAGGCAAGACCACACT TGCTAAAGCCCTCTTTCAGCAAATGTGTACCTACTTTGATGCTTCTTGTTTCATTGAAGACTGTGAGAAAGCTATTCATA AACAGGGACTTTATTGGTTGCTGGAGGAACTGCTTTTGAAAGAACATCATCCAAACCCGAGTTTTCTTAGAGACATATTA AGCAGTAAGAGATTCCTTGTTGTTCTCGATGACGTCGGTGACCCTCGGGTCGCTGAGTCTTTTCTCGACGGGTTTGAGTT CGCTCCTGAAAGCCTGATCATCATAACCTCTAGAGATAAACAGGTGTTTCGACTTTGCCGAATCGATCACATATATGAGG TTCAGGGGCTAAATGAGAAAGAGGCTCTGCAACTATTCTGCCTGTGTGCGTCTATAAAGGATACTACAGAGCAGAATATG AATGAGCTGTCAATGAAAGTGGTTCAGTATGCTAATGGAAATCCATTAGCTCTCAGTGTTTTTGCTAGAGAGCTCAAGGG TTATAAAAAAATTTCGGAAATGGAGGCTGCGTTCCTCAAACTAAAGCAACATCCTCCGTTTGAGATTATTGATGCATTCA AGAGCAGCTATGATACACTCACTTGTTTCTTCCAGGGAGAAAATGTCGACTATGTGATGCAACTGCTTGATGGTTGTGGT TTCTTTCCACATGTTGGAATCGATGTTCTTGTTGACAAGTGTCTGGTGTCTGTTTCCGAAAATAGAGTGTGGATGCATTA TTTGACCCAAGATGTTGGCCGAAAATTTATACTTGAAACAGTACAAATTGAAAGGCGCAGCAGATTGTGGGAACCTCAAA ACATCAAATATCTATTAGAAGAGAGTGAACATGAAGTAATTGGAGAAGCCAAAACAAGTTTCAAACGTGCTCAGGGAACT GAAGCGATCGAAGGCATGTTTTTGGACACATCATACTTAAATTTAGATATCAAGCCTGGTGCCTTTGTGAACATGTTGAA CCTTCGGTTGCTGAAGATATACTGTTCCAATCCTGAAATCCGTCCTGTAATCAAAATTTCCAAAGGCTTTCTCCATTCTC TTCCTAATGAGCTAAGACTCCTCCACTGGGAGTACTATCCTCTGGAATCCTTGCCTCAAAATTTTGATCCAAGACACCTT GTTGAAATCAATATGCCGTACAGTCAACTTCAGAAACTTTGGGGTGGAACCAATAACCTGGAGATGTTGAGGACGGTTAT GCTTTGTAATTCACAGCAACTAATTGATATTGACGATATCTTAAAAGCTCAGAATATTGAGGTAATTGATCTCCAAGGTT GTCCAAGACTGCAGAGTTTCCCAGCCACAGGTCAATTGATTCATCTACGAGTTGTGAATCTCTCAGGATGCACAGAGATC AAAAGTTTACAGGCGGTTCCACCAAATATTGAGACATTGAATCTCCAGGGAACTGGCATAATGGAATTACCAATTTCTAT TGTTAAGCCAAATGGCGGAGAGCTTATGTGTCTTGTAGCAGAAATTGATGGTCTTTCGGATGCCTTGAAACTTGAGCGTT TAGAAAGTCTGAAGAAATCTAGCTCGTCTTGTCAAGATCCTTGCAAGCTTAAGTGCTTGGAGCTGAAAGATTGTTTTCGT TTGCAAAGTCTCCCAAACATGGTCAATTTGGAACTTCTCACAGTTCTTGATCTCTCTGGTTGCTCCAAGCTCGAGAGTAT ACAGGGTTTCCCACGGAACCTGAAAGAGATATATCTTACTGGCACTGCGGTAAGAAAAGTGCCACAACTTCCTCAAAGTC TCGAACTCTTGAATGCACATGGTTGTCTCTCTCTGAAAAAAGTTCCTTTGGACTCCGAGAAACTCTCTATACATTACACA TTCACTAACTGTTTTAATCTATCTCCACAAGTGGTCAGCGACTTTTTAGTCAAAGTGTTGGGTAATGTTAAACACATACC AAGAGAGCTTCCACTGGAACTCAACGAAGCTCCGGCTTTCAGCTTCTGTGCTCCCTCTTATGCGAATCAAAATTCCACAC TTGATCTGCAACTAGGATTTTCTATAATGACACGACAGGATCCTTCTTGGAGGAACACAGTTGTGGGATTTACTATGCTG GTGGAAGTTACATTTTCGGAGGATCACGATGATGCTAATGGTTTTAGCATTAGTTGTGTTTGCAGATGGAAAACCAAGGA AGGCCACAGTCATAGGATAGAAAGAACTTTGCATTGTTGGGCTGAAGGGAAAGCTGCTCCAAAAGTGCGAAAGGATCATA TGTTTGTCTTTTCTGATGTCAAAATGCGTCTAGGTACCGACATATGTGTTGACTTGGTTGTATTCGAGTTCTTTCCTGTC AACCAACAGACAAAGCGTCTAGATGATAGTTGCACAGTGAAAAGATGTGGAGTCTATGGAATAACGAACAATACAGATGC TAAGATGAGCTCACCAGTTTTGTCCGTGGATCCGATGGAGGTTTCTGGTAATGAAGTTGGAGAATTATTGAGAGTCAGCT ATGATGGTTTAAAGGAGATGAACAAAGCTTTGCTTCTTTACGTAGCGTGTTTGTTCAATGATGAGGAAGGTGATTTGGTG GCACCACTTATTGCTACCATTGACTTGGACATTAGCTCTGGCCTCAAGGAATTAGCCAGTAGGTCCCTCATTCGTGTATC TGGCAATGGGGAAGTAGTGATGCATTGTTTGCTGCGACGAATGTGTAAAATAATCCTCCACAGTCAAGCCATGCTGCCTG ATAGCTCGAAAGAATTAACAAGAGTCTCTAAAAAGAACTCTTCTTGGTCTCACAATCGGAAATGTGATGTTTACCGGAGC TTCAGCAGGCAAGATGTCAGTAAAACATTCATCAGCCAATTGCTTGTGGCAATCAAACTCAAATCAATCATCACATGTGA AAACAATGAGATGGACAGAGGCCAGCTGTGTAGCCCTCTGCTTGCACAGGCGATAAGAGATTCGAGGATCTTCATTGTTG TGTTCTCCAAAAGGTACGCCTCTTCAAGCTGGCTCCTGAATGAGTTGGTGGAGATTGCAAAGTGTAAGCAGGAGTTGGGT CAGATAGCGATGCCATTCTTCTTTAACGTTGATCCTTCGGAAGTTCGGAGGCAGACCGGTGAATTCGGAAGGCATTTCAA ACAGACTTGTAAGGGCAAAACAGATGATGAGAAACATCAATGGCAACGAGCTTTAGTCTACATAGCAAACATTCCAGGAT ACAATAACTTGAGATGGTACGTTTTCGTCAGTCATTGCATTCTCTTGGATTTGAAACAAATGTGA |
| AA seq | Len:1275 aa MSDREKDEHIVCIRCLEEVRYSFVSHLSEALRRKGIKDVIVDVVDSDDLFSKESESKVEKAKVSLLVLPANCEPTRICRD KFVKVLECDPVVIPVLYGDSPFYGGEWLTSLGLNLIGLSPLHQSREECSDSILVEEIVRDVYEKLFHMGRIGIYSKLLEI ETMVCKQPLRTRLVGVCGMPGIGKTTLAKALFQQMCTYFDASCFIEDCEKAIHKQGLYWLLEELLLKEHHPNPSFLRDIL SSKRFLVVLDDVGDPRVAESFLDGFEFAPESLIIITSRDKQVFRLCRIDHIYEVQGLNEKEALQLFCLCASIKDTTEQNM NELSMKVVQYANGNPLALSVFARELKGYKKISEMEAAFLKLKQHPPFEIIDAFKSSYDTLTCFFQGENVDYVMQLLDGCG FFPHVGIDVLVDKCLVSVSENRVWMHYLTQDVGRKFILETVQIERRSRLWEPQNIKYLLEESEHEVIGEAKTSFKRAQGT EAIEGMFLDTSYLNLDIKPGAFVNMLNLRLLKIYCSNPEIRPVIKISKGFLHSLPNELRLLHWEYYPLESLPQNFDPRHL VEINMPYSQLQKLWGGTNNLEMLRTVMLCNSQQLIDIDDILKAQNIEVIDLQGCPRLQSFPATGQLIHLRVVNLSGCTEI KSLQAVPPNIETLNLQGTGIMELPISIVKPNGGELMCLVAEIDGLSDALKLERLESLKKSSSSCQDPCKLKCLELKDCFR LQSLPNMVNLELLTVLDLSGCSKLESIQGFPRNLKEIYLTGTAVRKVPQLPQSLELLNAHGCLSLKKVPLDSEKLSIHYT FTNCFNLSPQVVSDFLVKVLGNVKHIPRELPLELNEAPAFSFCAPSYANQNSTLDLQLGFSIMTRQDPSWRNTVVGFTML VEVTFSEDHDDANGFSISCVCRWKTKEGHSHRIERTLHCWAEGKAAPKVRKDHMFVFSDVKMRLGTDICVDLVVFEFFPV NQQTKRLDDSCTVKRCGVYGITNNTDAKMSSPVLSVDPMEVSGNEVGELLRVSYDGLKEMNKALLLYVACLFNDEEGDLV APLIATIDLDISSGLKELASRSLIRVSGNGEVVMHCLLRRMCKIILHSQAMLPDSSKELTRVSKKNSSWSHNRKCDVYRS FSRQDVSKTFISQLLVAIKLKSIITCENNEMDRGQLCSPLLAQAIRDSRIFIVVFSKRYASSSWLLNELVEIAKCKQELG QIAMPFFFNVDPSEVRRQTGEFGRHFKQTCKGKTDDEKHQWQRALVYIANIPGYNNLRWYVFVSHCILLDLKQM* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | hypothetical protein; K16225 probable WRKY transcription factor 52 (A) |