Names & Information
Knowledge of BnaA09G0201000ZS:
| Gene Name | BnaA09G0201000ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC09g18870D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance-like protein CSA1 OS=Arabidopsis thaliana GN=CSA1 PE=3 SV=1 |
| NT seq | Len:2949 nt ATGGAAAGGCTCAACACCAATCCACCATGTTGTTTGGCACGAGAAGAGCCAGAACAGGCTACTCTCTTTGGAATCGAACA TCGGATCAAGCAAGTCGAGGAAAAGTTTGGTTTCGATCACGGAGACGAAACTCGAATTGTGGGAATCGTTGGGATGCCTG GAATTGGCAAAACTACTCTCGCAACTGAGCTGTTCAACAAGTATAAAAACAAGTTCATTCGTTGCAACTTTTTGAAGATT CGTGGGAAGCTTGCGAAGATGGGAGCTGAATCATCTGATGACCGTTTGAGGACGACCTTCCTTGAAGGTTTACTTCCGAA CATAGACGTAACTGATGATTGCGTGAAGAGTAAACTGCTCTCGAAAAAAGTCTTTGTTGTTCTCGACGATGTGAGTAGCA AAGAACATATAGAGATTCTTCTTGGAGACCGAAGTTGGATCAAGAAAGGAAGCAGGATTGTTATTACAACCCGTGACAGG GCATTGATCACCGACTTAGATCCAAATCCTTACGTGGTTCCAAGATTGAACCCTCGAGATGGGTTGATGTACTTCAGCTT CTTTGCTTTAGGGGGTTTCAATCCAGAGATGGGAGGAGGTTATATGAAAATGTCTAGAGAGTTTGTGGATTACGTTAGAG GCAATCCATTTGCTCTCAAGGTGTTGGGTAGGGAACTTCTAGGGAAAGGTGAGGCTTTCTGGAATGCGCGGCTTGATACA TTGGCAAAATGTCCCAACAAGAGCATTCAAAATCTGTTGAAGATAAGTTATGATGAGCTTAGTGAAAAGGAGAAGGATGC CTTCCTTGACATTGCGTGTTTCTTCAGATCAGAAGATGAGTTTTATGCGAGAAGCTTACTAGATTCTGAAGTTGCGAGTG AGATAACGGATCTTGCCTACAAGTTTTTAATTAGTATCTCTGGGGGACGCGTAGAGATGCATGATTTACTTCATACATTC GCCTTGGAACTATGTTCGTTATCATCCACAAAAGAGAAACGTAGGCTGTGGAAATGTCAAGACATTGTCGCTGCGTTGCA TGGCAAAATGGATGAAAAAATTGTGATAACTGTGAGAGGCATTTTTCTAGACATGTCTCAAGTAATGGACATGCCTTTAT ACAGTGGGGCCTTTACCAAAATGTGCAATCTCTGGTACCTTAAATTCTACACTTCTACTTGTCCTCGGGAATGTGAAGGG GACTGCAAGTTAAATTTCCCTGATGGACTTTCATTACCTCTGGAAGAGGTCCGATATCTCGACTGGCTGAAATTCCCTTT GGATGAACTTCCATCAGACCTCAACCCCAAGAATCTTGTTGATCTCAGGCTGCCTTACAGCAAGATTAAACAAGTATGGA AAGATTCTAAGGATACACCGAAACTGAAGTGGGTGGATCTTAACAACTCCAGAAAGTTGCAGACGTTGTCAGCGTTCTCA AAGGCCCCAAATCTTTTGAGACTAAATCTTGAAGGTTGCACAAGCCTAGAACGTTTATCTGAAGAGATGCAAACAATGCA AAGTCTTGTTTTCTTGAACTTGAGAGGATGCACAAGTCTCTCGCATCTTCCGCAGATGAATCTGAGTTCATTGAAAACTC TTATCCTCAGCGGCTGTGCAAAGCTTTATAGATTTCAGCTAATTTCCGAAAATCTAGAATCTCTCTACTTAGATGGAACT GCAATAGAGGATCTCCCTTCAGACATTGTGAAGCTTCAAAGACTTGTCTTATTGAATCTGAAGGAGTGTAAAAGGCTGAG GAGTCTTCCAGAGTGTATAGGAAAGCTTAAAGCTCTTGAAGAACTGATTCTCTCTGGCTGTTCAAATCTCGAGACTTTTC CAAATGTTGAAGACAGCATGGAAAATTTCAGGGTTTTACTACTTGATGGGACTTCAATCTTAGAGGTGCCAAAGATACTT CCCGGTATTAACAGCCTGTTGTTTCTGAGGCGTATATCTTTTAGCGGAAATGGTGTGATCAGCAGCTTAGGATCTGACAT CAGTCGAATGTATCATCTCAAATGGTTGGACTTGAACTCTTGTGAGAAACTCAGGTCTCTTTCGACGCTTCCACCAAATC TCCAGTGGTTAGATGCACATGGTTGCATCTCCTTGCAAACAGTCTCGAGTCCTCTAGCCTTTATTATCCCAACAGAACAG ATTCACAACACTTTCACTTTCACCTTCACTAAATGTTGTAAACTCAATGAGGCTGCAAAGAATGAAATTGCATCCCACGT TAGGAGAAAAGGCCAGCTAGTCTCATCAGATGATCACCACAATGGGAATTTTATCTCGACTTGCTATCCTGGATACGAAG TACCTGCATGGTTCAGTCACGAAGCCTATGGTTCAGTGTTAGAACCAAAGCTGCCTCCACATTGGTGCGACAACAAGTTT CTAGGAATATATCTATGTGCCATTGTTTCGTTTCGTGACTGCGGAGATCAGAGCAGCCGCATCCTGGCTAAATGTACCTG TGAATTTGAAGACTTAGATGCACCATGTAGCCGGTTTAGTATACCTGTTGAAAGTGAGCCGCGTAATATCGAGTCAGACC ATGTCTTCATCAGCTATATAAGTTGGTCAAACATCAAGAAACGTCAAGAAGTAGAGTTCAAGAAAGGATGTGTTCCTACT AGAGCTGTCCTTAGGTTCAAAGTGACTGATGGGGCTGGTGAAGAGATTCCACAGTGTGAAGTTGTGAAGTGTGGGTTCAG TTTGGTGTATGAACCTGATGATGAAATTAGTAATGTTGTTTCTTTGCCGGCGGCAAGGACGATGTTGAATGGTGAGAGTA GTCAAGGTGAGGTAACCACTTTCCAATCTGGAGAAGAAGCTCCTACTGAAAGTCCAACAACAGCTGACTCTACAAGAATT GATGAGAGAGTATCGGGGCTGGAACCAAGTTCTTGGCTTTTTTTTTGTGGGTTTGTGGTGAGTTTCTAA |
| AA seq | Len:983 aa MERLNTNPPCCLAREEPEQATLFGIEHRIKQVEEKFGFDHGDETRIVGIVGMPGIGKTTLATELFNKYKNKFIRCNFLKI RGKLAKMGAESSDDRLRTTFLEGLLPNIDVTDDCVKSKLLSKKVFVVLDDVSSKEHIEILLGDRSWIKKGSRIVITTRDR ALITDLDPNPYVVPRLNPRDGLMYFSFFALGGFNPEMGGGYMKMSREFVDYVRGNPFALKVLGRELLGKGEAFWNARLDT LAKCPNKSIQNLLKISYDELSEKEKDAFLDIACFFRSEDEFYARSLLDSEVASEITDLAYKFLISISGGRVEMHDLLHTF ALELCSLSSTKEKRRLWKCQDIVAALHGKMDEKIVITVRGIFLDMSQVMDMPLYSGAFTKMCNLWYLKFYTSTCPRECEG DCKLNFPDGLSLPLEEVRYLDWLKFPLDELPSDLNPKNLVDLRLPYSKIKQVWKDSKDTPKLKWVDLNNSRKLQTLSAFS KAPNLLRLNLEGCTSLERLSEEMQTMQSLVFLNLRGCTSLSHLPQMNLSSLKTLILSGCAKLYRFQLISENLESLYLDGT AIEDLPSDIVKLQRLVLLNLKECKRLRSLPECIGKLKALEELILSGCSNLETFPNVEDSMENFRVLLLDGTSILEVPKIL PGINSLLFLRRISFSGNGVISSLGSDISRMYHLKWLDLNSCEKLRSLSTLPPNLQWLDAHGCISLQTVSSPLAFIIPTEQ IHNTFTFTFTKCCKLNEAAKNEIASHVRRKGQLVSSDDHHNGNFISTCYPGYEVPAWFSHEAYGSVLEPKLPPHWCDNKF LGIYLCAIVSFRDCGDQSSRILAKCTCEFEDLDAPCSRFSIPVESEPRNIESDHVFISYISWSNIKKRQEVEFKKGCVPT RAVLRFKVTDGAGEEIPQCEVVKCGFSLVYEPDDEISNVVSLPAARTMLNGESSQGEVTTFQSGEEAPTESPTTADSTRI DERVSGLEPSSWLFFCGFVVSF* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0006952 |
| Pfam | NB-ARC domain |
| KEGG | hypothetical protein; K16226 disease resistance protein RPS4 (A) |