Names & Information
Knowledge of BnaA09G0203400GG:
| Gene Name | BnaA09G0203400GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaC09g19410D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance protein RPS6 OS=Arabidopsis thaliana GN=RPS6 PE=1 SV=1 |
| NT seq | Len:3204 nt ATGGATTATTGTAATTGGCTATACGATGTTTTCCCGAGCTTTAGTGGGGAAGATGTGCGCATAAATTTTCTTAGCCATTT TCTCAAGGAGCTAGATCGAAAACTGATCAAGGCTTTCAAAGACAATGAGATCGAGAGAAGCCACTCGATTGCCCCTGCGC TTGTAACCGCGATTAGGACGTCCAGGATCGCGGTCGTTGTGTTCTCGCCAAACAATAACGAAGCAAAAATGATTGAAGTA ATCGTCAATGACCTTTTGGGCAAACTGAATTTTACTCCATCAAAAGATTTTGAGGAATGTGTTGGCATTGAAGATCATAT TGCTGAGATGAGCTTGCTGTTGGATATGGAATCTGAGGAAGTAAGGATGGTTGGGATATGGGGCCCATCGGGAATTGGCA AGACTACCATTGCAAGAGCCCTATTTAGTAGACTCTCTCGTCGGTTCCAGTGCAGTGTTTTCATTGACAGGAAATTCATA TCTAAGATTATGGAAGGTTATAGGGGAGCCAACCCTGATGACTATAACATGAAGCTGAGTTTGCAAAGACATTTTCTGTC TGAAATTTTAGGCACAAGGCACATACAGATAGATCACTTAGGTGCGGTGGAAAATAGGCTAAAAAACCAGAAAGTCCTTA TCTCTATCGATGATTTGGATGATCAAGTGGTGCTAGATGTATGTGCAGGTCAAGCTCATTGGTTCGGAAGTGGAAGCAGA ATAATCGTGGTTACAAAAGATAGGCATTTTTTAAGGGCTCATGGGATTGATCATATTTACGAGGTCTGTCTCCCATCTGA AGAGCGTGCTCTTGAGATACTTTGTCGATCTGCTTTCAAGCAAAACTCTCCACGTGAAGGCTTTGAGAAGCTTGCAGTTG AAGTTACTAGACATGCCGGTAGTCTTCCTTTGGGTCTTACTGTTTTAGGTTCCACTTTGCGGGGGAGGGACAAGGCGTAT TGGATGGATATACTGCCAACGCTTCAAAATGGTGTTGGTGAGGAAATAGACAAAACCCTAAGAATTAGCTATGATGGTTT GAATAGAGAAGAAGATAAAGTGATATATCGTCACATTGCATGTCTTTTCAATGGTGAGAAAGTCCCTTACATTAAGTTGT TGCTGGAAGATAGGAACCTGGGTGTAAATGTTGGGATCGAAAACCTAGTTGATAAGTCTCTCATACACGTAAGAAGCGAT ACCGTGGAGATGCACAGTTTGTTACAAGAAATAGGTAGAAAAATTGTTCGTGCACAGTCCATTGACGAGCCTGGAAACCG AGAATTTCTGGTGGATTTGGATGATATATGCGACGTCCTTAGTGAAAACAGTGGTACTAAGAAAGTTTTAGGTGTAGCAC TGGATATGGACAAGATTCATGATGAGTTACATGTCCATGAAAATGCCTTCAAAGGGATGAGTAATCTCCGTTTCCTTAAA TTTTACACGTTTGGAAAAGAAGCCAGATTGCGGTTAAACGAAAGCTTTGACTATTTGCCCTCAAAACTCAGATTATTGTG TTGGGACAAATATCCAATGAGATGTTTGCCTTCCAAGTTTTGTCCTCAAAACCTCGTCATTCTTGAAATGAAGAATAGCA ATCTTGAAAACTTGTGGGAAGGCGTCTCGCCGCTTGGACATCTTAAGAAAATGGATTTGTGGGGATCTAAGAACTTGAAA GAGATTCCCGATCTTTCGAAAGCCACCAGTCTAGAGAAATTAGATCTCAAGGGCTGTTCTAGTTTGGTGGAGCTCCCTTC ATCTATTAGCAAACTCAATAAACTGACTGAATTGAACATGCCATCATGTACAAACCTAGAGACCCTTCCGACTGGAATGA ACCTTGAATCCCTCAACCGCCTCAATCTCAAAGGATGCACACGCTTGAGAATTTTTCCAAATATCTCAAGAAACATCTCA GAGCTTATTTTAGACGAAACATCCATTACCGAATTCCCTTCAAATTTGTATCTCGAGAATCTTAATTTGTTTTCCATGGA AGGTATAAAGAGTGAGAAGCTATGGAAAAGAGCACAGCCGCTTACACCTCTCATGACCATGTTATCTCCTTCTTTGAGGA TCTTGTCTCTCTCGGATATCCCTAGTTTGGTGGAGCTTCCTTCTTCATTTCAGAATCTCCATAAACTTACAAATTTGAGC ATTACAAGATGCAAAAACCTAGAGATTCTTCCCATGGGAATCAACCTTCCATCGCTCATTCGCCTTATTCTTAGTGGGTG CTCGCGGTTGAGGAGTTTTCCTGATATCTCAAGAAATGTCTTAGACCTCAATCTAAGCCAAACAGGAATAGAAGAGATTC CTTCGTGGGTTGAGGACTTCTCTAGGCTCAAATACCTATTTATGGAAAGTTGCCCTAAGTTAAAATATGTATCCATTTCT ACACTGATACATCTTGAGATGGTTGACTTTTCAAACTGTGGGGCATTGACTGGAGCTGGTATGATTGGTTATCAAAGTGG AGAGGCAATGAGACCAGATGATATTGAAACAGAGGTACTAGCCCCCGAAGAGGCCTCTTCTTCTCTTCAAGATAATTTTT TGCCAAGAGTCAAATTCAGATTCATCAACTGCTTTGACTTGAATCTTGAAGCTCTTCTTCAGCAACAATCAGTTTTTGAG CAACTCATCTTGTCTTGTGAAGAAGTGCCTTCATATTTCACTCATAAAGCTACAGGAGCATCCACATCTCTGACCGTCCC TCTGCTTCAAACCTCTCTCTCTCGACAAATCTTCAGACTTCGAGCTTGCGCTGTTGTTGTTTTTGACCCTATACCAACCC TAGGTTCTGTTTGCGTGTATATCAAAGTAAGTTGTAGGTTCAAAGACGAACATGGAAACTACTTTGATTCTGCTTATCAT CAAGAAAACATCACGGCATATAAGAAGGGTGGTCATATGTTTATATTCGATTATTGTTTCCCTCTAAATGAAGACAATGC TCATCTAGCTAAAATTAGCTGCGATCACGTGGATATACAGTTTCATTTCCCTTCTAATGTTCCCTGCAAACTGATAGAAT GGGGTATACGACTGATAGAGGATTTTTCATCACCGGAGAACCAACTATTTAGTCCATCCACTGATGAACAGAATGTGGCT GATGAGTCTGACCACGGTGAAGAGTGTGAAGTCCAGGGCTGTTTTTCATTTGTGAATCTGTTTTTTGCTATTTGTCAATG GTGA |
| AA seq | Len:1068 aa MDYCNWLYDVFPSFSGEDVRINFLSHFLKELDRKLIKAFKDNEIERSHSIAPALVTAIRTSRIAVVVFSPNNNEAKMIEV IVNDLLGKLNFTPSKDFEECVGIEDHIAEMSLLLDMESEEVRMVGIWGPSGIGKTTIARALFSRLSRRFQCSVFIDRKFI SKIMEGYRGANPDDYNMKLSLQRHFLSEILGTRHIQIDHLGAVENRLKNQKVLISIDDLDDQVVLDVCAGQAHWFGSGSR IIVVTKDRHFLRAHGIDHIYEVCLPSEERALEILCRSAFKQNSPREGFEKLAVEVTRHAGSLPLGLTVLGSTLRGRDKAY WMDILPTLQNGVGEEIDKTLRISYDGLNREEDKVIYRHIACLFNGEKVPYIKLLLEDRNLGVNVGIENLVDKSLIHVRSD TVEMHSLLQEIGRKIVRAQSIDEPGNREFLVDLDDICDVLSENSGTKKVLGVALDMDKIHDELHVHENAFKGMSNLRFLK FYTFGKEARLRLNESFDYLPSKLRLLCWDKYPMRCLPSKFCPQNLVILEMKNSNLENLWEGVSPLGHLKKMDLWGSKNLK EIPDLSKATSLEKLDLKGCSSLVELPSSISKLNKLTELNMPSCTNLETLPTGMNLESLNRLNLKGCTRLRIFPNISRNIS ELILDETSITEFPSNLYLENLNLFSMEGIKSEKLWKRAQPLTPLMTMLSPSLRILSLSDIPSLVELPSSFQNLHKLTNLS ITRCKNLEILPMGINLPSLIRLILSGCSRLRSFPDISRNVLDLNLSQTGIEEIPSWVEDFSRLKYLFMESCPKLKYVSIS TLIHLEMVDFSNCGALTGAGMIGYQSGEAMRPDDIETEVLAPEEASSSLQDNFLPRVKFRFINCFDLNLEALLQQQSVFE QLILSCEEVPSYFTHKATGASTSLTVPLLQTSLSRQIFRLRACAVVVFDPIPTLGSVCVYIKVSCRFKDEHGNYFDSAYH QENITAYKKGGHMFIFDYCFPLNEDNAHLAKISCDHVDIQFHFPSNVPCKLIEWGIRLIEDFSSPENQLFSPSTDEQNVA DESDHGEECEVQGCFSFVNLFFAICQW* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |