Names & Information
Knowledge of BnaA09G0208000ZS:
| Gene Name | BnaA09G0208000ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaA09g18010D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance protein RPS6 OS=Arabidopsis thaliana GN=RPS6 PE=1 SV=1 |
| NT seq | Len:3579 nt ATGGCTTCTTCTTATTCTTCATCCTCTTCTCGCAATTGGTCATATGACGTTTTTCCGAGCTTCAGCGGAGAAGATGTCCG CAAGACCTTCCTCAGCCACTTTATGAAGGAGCTAGATCGCAAACTTATCACTGCTTTCAAAGACAACGAGATCGAGAGAA GCCGGTCCCTCGATCCTGAGCTTAGACAAGCGATCAAGGATTCAAGGATTGCAGTGGTCATTTTCTCCGCAAACTACGCC TCTTCAAGCTGGTGTCTTAATGAGTTGCTTGAGATTGTGAGGTGTAAGGAAGAGTGTGCTCAGATGGTGATCCCGGTTTT CTACGGTTTGGATCCTTCCCACGTGAGGAAACAGACTGGAGACTTTGGGAAGATTTTTGAGAAGACATGCCAAAATAAAA CTGAGGACGAAATCATTCTATGGAGGGAAGCTTTGACTGATGTAGCTAACATCCTTGGATATCATAGTGTCACCTGGGAC AACGAAGCAAGGATGATCAACGAAATAGCCAATGATGTTTTGGGTAAATTGAATGTTTCTCCATCATATGAGGTTGAGGA TTTTGTCGGAATTGAAGATCACATCAGAGCTATGAGTTCATTGCTTGACTTGGAATCAGAGGAAGTGAGGATGGTTGGGA TATGGGGCCCCTCTGGAATTGGCAAGACTACCATTGCAAGAGCTCTATTTAGTCGCCTCTCTCGTCGTTTCCAAAGTAGT GTTTTCATAGATAAAGTTTTCATATCCAAGAATATGGATGTTTATAGAGGAGCTAATCTAGGAGACTATAACATGAAGCT GCACTTGCAACGAGCTTTTCTAGCTGAAGTTTTAGACAATAGGGATATAAGGATAGACCATATAGGTGCGGTGGAAAAGA TGCTAAGGCACCGAAAAGCTCTTATTTTTATCGATGATTTGGATGATCAGGACGTGCTAGATGCCTTAGCTGGAAGAACC CAATGGTTTGGAAGTGGGAGTAGAATCATTGTGGTTACAAAAGATAAACATTTTCTAAGGGCCCATGGGATTGATCACAT TTACGAGGTCTGTCTCCCTTCTAAACACCTTGCTCTTGAGATTTTTTGTCAATCTGCTTTCAGAAGGAATTCTCCACCTG ATGGTTTTATGGAGCTTGCTTCTGAAGTTGTATTCTGTGCCGGTAACCTTCCATTGGGTCTTGACGTTTTGGGTTCTAAT TTACGGGGCAGGGACAAAGAAGACTGGCTGGATATGCTGCCGAGGCTTCGAACGTCTTTGGATAGAAAGATTGAGAGAAC ACTAAGAGCCAGCTACGATGGGTTAAATAACAAGAAAGATAAAGCAATATTTCGTCACGTTGCATGTCTTTTTAGTGGGA GGAAAGTTGATCACATTAAACTGCTACTAGAAGATAGAAACTTGGATGTTAATATTGGGCTTAAGAATTTAGTTGATAAA TCTCTTATCCATGAAAGATTTAATACTGTGGAAATGCACTCTTTGCTACAAGAAATGGGTAAAGAGATCGTCCGTGCACA GTCCGATGAACCTGGAGAACGAGAATTCCTTATGGATTCGAAGGATATTTGGGATGTACTTGAAGATAATACTGGTACCA AAAGGGTTTTGGGGATAGAGTTGATTATGGATGAGACTGATGAACTTCATGTACATGAGAATGCATTCAAAGGGATGTGT AATCTCAGTTTTCTAGAAATTTTCGGATGTAACGTTGTTAGATTGCACTTACCCAAAAACTTCGACTATTTGCCCCCTAG TCTCAGATTATTGTCTTGGCATGGGTATCCGATGAGATGTATGCCTTCTAAGTTCCAACCTGAAAACCTCATCAAGCTTG TGATGCGTGCAGGCAATCTCGAGAAGCTGTGGGAAGGAGTTGCGTCACTTACATGTCTCAAGGAAATAGATTTGACGCTA TCTGTAAATCTAAAAGAAATCCCAGATCTTTCAAAGGCCATGAATCTCGAGAGGCTTTGTCTTGACTTTTGCTCGAGTTT ATTAGAGCTTCCTTCCTCAATTCGGAATCTAAAAAAACTCAGGGATTTGGAAATGAATTTTTGCACAAATTTGGAGACTA TTCCAACTGGGATTTATCTCAACTCTTTCGAAGGCTTTGTTCTCTCTGGATGCTCACGGTTGAGAAGGTTTCCTGAAATC TTAACCAACATCTCAGAATCCCCTTCTTATTTGACTCTCGATGTGCTTAACATGACCAACCTAAGGAGTGAGAACCTATG GGAAGGAGTGCAGCAGCCGTTTACTACCCTCATGACGAGATTGCAACTCTCGGAAATCCCAAGTTTGGTGGAGCTTCCTT CTTCATTTCAGAATCTAAATAAACTGAAGTGGTTGGACATTAGAAATTGCATAAATCTGGAGACTCTTCCAACTGGCATT AACCTCCAATCACTGGAATATTTAGTTCTCTCCGGATGCTCACGGTTGAGGAGTTTTCCTAATATCTCAAGAAACATCCA ATACCTCAAACTAAGCTTTTCAGCGATAGAAGAGGTTCCTTGGTGGGTCGAGAAATTCTCTGCGCTCAAAGATCTAAATA TGGCTAACTGCACCAACTTACGACGTATATCCCTAAACATTTTAAAACTGAAACATCTCAAGGTGGCTTTATTTTCAAAC TGTGGGGCATTGACTGAAGCTAACTGGGATGATAGTCCAAGCATTGTGGCAATAGCAACAGACACTATTCACTCTAGTCT TCCTGACCGTTATGTCTCAATCGCCCACCTCGATTTTACAGGCTGCTTCAACTTGGATCACAAAGATCTATTTCAACAAC AAACAGTTTTCATGCGAGTGATACTCTCAGGTGAAGAAGTGCCTTCATATTTCACTCACCGTAATAGTGGAACCTCTCTA ACCAATATCCCTCTACCACACATCTCTCCCTCCCACCAATTCGTCAGAGTAAAGGCTTGTGCCTTGTTTGATATCGCTAC ATTTAGTTTTCATTCATTCAACATCCAGGTATGTTTTCGGTTCATAGACATGTCTGGGAATCACTTTGATGTGCAACCAG AATTCTCAACATCGAGGCTGGGAGGTCATCTGGTTATATTTGACTCTTGTTTCCCTTCAAACAAAGACATTACACTTCTA TCTGATCAACTTAACTATGATCACATTGATATACAATTTCGTCTCATTGAGGAAGACTATGTGCTTCAGTTAAAAGGATG CGGCATATTGTTTCCCGAGAACGGTCAATCAATGGGTAACCAACCTTGTAACCCAAAAATTCTTCCACTTGTTTCTGGAG GAAACACAAGCAACAATGGTTACTTGGGAGGCCATGAGACCGTACACAGCCAAGAGTATGGAGATAGCGCTCTGGAGAGT AATCCAGATAATATTTCACATGTTTTTGCAGCTGATGAAGACAATGTTGTTAATGATGGATGCCGTGTGGCTGACCAAAG TGTAGAGACATTGAGAAACAGCAAGCGCATGCGGGTGTTTGTGAAACCAATGAAGACAACATGGTTAATCATGAGCCTAA ACACGAATGTGAAGACAGTTGTGAAGGGACAGAGAAAAACAGGAAGCGAATGCGGGTAA |
| AA seq | Len:1193 aa MASSYSSSSSRNWSYDVFPSFSGEDVRKTFLSHFMKELDRKLITAFKDNEIERSRSLDPELRQAIKDSRIAVVIFSANYA SSSWCLNELLEIVRCKEECAQMVIPVFYGLDPSHVRKQTGDFGKIFEKTCQNKTEDEIILWREALTDVANILGYHSVTWD NEARMINEIANDVLGKLNVSPSYEVEDFVGIEDHIRAMSSLLDLESEEVRMVGIWGPSGIGKTTIARALFSRLSRRFQSS VFIDKVFISKNMDVYRGANLGDYNMKLHLQRAFLAEVLDNRDIRIDHIGAVEKMLRHRKALIFIDDLDDQDVLDALAGRT QWFGSGSRIIVVTKDKHFLRAHGIDHIYEVCLPSKHLALEIFCQSAFRRNSPPDGFMELASEVVFCAGNLPLGLDVLGSN LRGRDKEDWLDMLPRLRTSLDRKIERTLRASYDGLNNKKDKAIFRHVACLFSGRKVDHIKLLLEDRNLDVNIGLKNLVDK SLIHERFNTVEMHSLLQEMGKEIVRAQSDEPGEREFLMDSKDIWDVLEDNTGTKRVLGIELIMDETDELHVHENAFKGMC NLSFLEIFGCNVVRLHLPKNFDYLPPSLRLLSWHGYPMRCMPSKFQPENLIKLVMRAGNLEKLWEGVASLTCLKEIDLTL SVNLKEIPDLSKAMNLERLCLDFCSSLLELPSSIRNLKKLRDLEMNFCTNLETIPTGIYLNSFEGFVLSGCSRLRRFPEI LTNISESPSYLTLDVLNMTNLRSENLWEGVQQPFTTLMTRLQLSEIPSLVELPSSFQNLNKLKWLDIRNCINLETLPTGI NLQSLEYLVLSGCSRLRSFPNISRNIQYLKLSFSAIEEVPWWVEKFSALKDLNMANCTNLRRISLNILKLKHLKVALFSN CGALTEANWDDSPSIVAIATDTIHSSLPDRYVSIAHLDFTGCFNLDHKDLFQQQTVFMRVILSGEEVPSYFTHRNSGTSL TNIPLPHISPSHQFVRVKACALFDIATFSFHSFNIQVCFRFIDMSGNHFDVQPEFSTSRLGGHLVIFDSCFPSNKDITLL SDQLNYDHIDIQFRLIEEDYVLQLKGCGILFPENGQSMGNQPCNPKILPLVSGGNTSNNGYLGGHETVHSQEYGDSALES NPDNISHVFAADEDNVVNDGCRVADQSVETLRNSKRMRVFVKPMKTTWLIMSLNTNVKTVVKGQRKTGSECG* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0000166 |
| Pfam | Leucine Rich Repeat |
| KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |