Gene Name | BnaA09G0208100ZS |
Gene Location | |
Gene Structure | |
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Protein Name | |
Alternative splicing | |
Homology | |
Best Hit (NR) | BnaC09g19410D [Brassica napus] |
Best Hit (SwissProt) | Disease resistance protein RPS6 OS=Arabidopsis thaliana GN=RPS6 PE=1 SV=1 |
NT seq | Len:3462 nt
ATGGATTATTGTAATTGGCTATACGATGTTTTCCCGAGCTTTAGTGGGGAAGATGTGCGCATAAATTTTCTTAGCCATTT
TCTCAAGGAGCTAGATCGAAAACTGATCAAGGCTTTCAAAGACAATGAGATCGAGAGAAGCCACTCGATTGCCCCTGCGC
TTGTAACCGCGATTAGGACGTCCAGGATCGCGGTCGTTGTGTTCTCGCCAAAGTATGCCTCTTCGAGTTGGTGTCTGGAC
GAGTTGGTGGAGATCGTGAGATGTATGGAAGAGTTGGGTCAACTAGTTCTGCCCATTTTCTATGGTTTAGATCCATCTCA
TGTCAGGAAACAAACGGGCAAGTTTGGAGAGGGTTTTGCCAAGACTTGTAAGATGAAAACAAAAGCTGTGAATTTGTATA
AACTGAAAATCAGATGGCAGCAGGCGTTGACCGTTGTCGCGAATCTACTCGGATATCATTCCCAAAATTTCAATAACGAA
GCAAAAATGATTGAAGTAATCGTCAATGACCTTTTGGGCAAACTGAATTTTACTCCATCAAAAGATTTTGAGGAATGTGT
TGGCATTGAAGATCATATTGCTGAGATGAGCTTGCTGTTGGATATGGAATCTGAGGAAGTAAGGATGGTTGGGATATGGG
GCCCATCGGGAATTGGCAAGACTACCATTGCAAGAGCCCTATTTAGTAGACTCTCTCGTCGGTTCCAGTGCAGTGTTTTC
ATTGACAGGAAATTCATATCTAAGATTATGGAAGGTTATAGGGGAGCCAACCCTGATGACTATAACATGAAGCTGAGTTT
GCAAAGACATTTTCTGTCTGAAATTTTAGGCACAAGGCACATACAGATAGATCACTTAGGTGCGGTGGAAAATAGGCTAA
AAAACCAGAAAGTCCTTATCTCTATCGATGATTTGGATGATCAAGTGGTGCTAGATGTATGTGCAGGTCAAGCTCATTGG
TTCGGAAGTGGAAGCAGAATAATCGTGGTTACAAAAGATAGGCATTTTTTAAGGGCTCATGGGATTGATCATATTTACGA
GGTCTGTCTCCCATCTGAAGAGCGTGCTCTTGAGATACTTTGTCGATCTGCTTTCAAGCAAAACTCTCCACGTGAAGGCT
TTGAGAAGCTTGCAGTTGAAGTTACTAGACATGCCGGTAGTCTTCCTTTGGGTCTTACTGTTTTAGGTTCCACTTTGCGG
GGGAGGGACAAGGCGTATTGGATGGATATACTGCCAACGCTTCAAAATGGTGTTGGTGAGGAAATAGACAAAACCCTAAG
AATTAGCTATGATGGTTTGAATAGAGAAGAAGATAAAGTGATATATCGTCACATTGCATGTCTTTTCAATGGTGAGAAAG
TCCCTTACATTAAGTTGTTGCTGGAAGATAGGAACCTGGGTGTAAATGTTGGGATCGAAAACCTAGTTGATAAGTCTCTC
ATACACGTAAGAAGCGATACCGTGGAGATGCACAGTTTGTTACAAGAAATAGGTAGAAAAATTGTTCGTGCACAGTCCAT
TGACGAGCCTGGAAACCGAGAATTTCTGGTGGATTTGGATGATATATGCGACGTCCTTAGTGAAAACAGTGGTACTAAGA
AAGTTTTAGGTGTAGCACTGGATATGGACAAGATTCATGATGAGTTACATGTCCATGAAAATGCCTTCAAAGGGATGAGT
AATCTCCGTTTCCTTAAATTTTACACGTTTGGAAAAGAAGCCAGATTGCGGTTAAACGAAAGCTTTGACTATTTGCCCTC
AAAACTCAGATTATTGTGTTGGGACAAATATCCAATGAGATGTTTGCCTTCCAAGTTTTGTCCTCAAAACCTCGTCATTC
TTGAAATGAAGAATAGCAATCTTGAAAACTTGTGGGAAGGCGTCTCGCCGCTTGGACATCTTAAGAAAATGGATTTGTGG
GGATCTAAGAACTTGAAAGAGATTCCCGATCTTTCGAAAGCCACCAGTCTAGAGAAATTAGATCTCAAGGGCTGTTCTAG
TTTGGTGGAGCTCCCTTCATCTATTAGCAAACTCAATAAACTGACTGAATTGAACATGCCATCATGTACAAACCTAGAGA
CCCTTCCGACTGGAATGAACCTTGAATCCCTCAACCGCCTCAATCTCAAAGGATGCACACGCTTGAGAATTTTTCCAAAT
ATCTCAAGAAACATCTCAGAGCTTATTTTAGACGAAACATCCATTACCGAATTCCCTTCAAATTTGTATCTCGAGAATCT
TAATTTGTTTTCCATGGAAGGTATAAAGAGTGAGAAGCTATGGAAAAGAGCACAGCCGCTTACACCTCTCATGACCATGT
TATCTCCTTCTTTGAGGATCTTGTCTCTCTCGGATATCCCTAGTTTGGTGGAGCTTCCTTCTTCATTTCAGAATCTCCAT
AAACTTACAAATTTGAGCATTACAAGATGCAAAAACCTAGAGATTCTTCCCATGGGAATCAACCTTCCATCGCTCATTCG
CCTTATTCTTAGTGGGTGCTCGCGGTTGAGGAGTTTTCCTGATATCTCAAGAAATGTCTTAGACCTCAATCTAAGCCAAA
CAGGAATAGAAGAGATTCCTTCGTGGGTTGAGGACTTCTCTAGGCTCAAATACCTATTTATGGAAAGTTGCCCTAAGTTA
AAATATGTATCCATTTCTACACTGATACATCTTGAGATGGTTGACTTTTCAAACTGTGGGGCATTGACTGGAGCTGGTAT
GATTGGTTATCAAAGTGGAGAGGCAATGAGACCAGATGATATTGAAACAGAGGTACTAGCCCCCGAAGAGGCCTCTTCTT
CTCTTCAAGATAATTTTTTGCCAAGAGTCAAATTCAGATTCATCAACTGCTTTGACTTGAATCTTGAAGCTCTTCTTCAG
CAACAATCAGTTTTTGAGCAACTCATCTTGTCTTGTGAAGAAGTGCCTTCATATTTCACTCATAAAGCTACAGGAGCATC
CACATCTCTGACCGTCCCTCTGCTTCAAACCTCTCTCTCTCGACAAATCTTCAGACTTCGAGCTTGCGCTGTTGTTGTTT
TTGACCCTATACCAACCCTAGGTTCTGTTTGCGTGTATATCAAAGTAAGTTGTAGGTTCAAAGACGAACATGGAAACTAC
TTTGATTCTGCTTATCATCAAGAAAACATCACGGCATATAAGAAGGGTGGTCATATGTTTATATTCGATTATTGTTTCCC
TCTAAATGAAGACAATGCTCATCTAGCTAAAATTAGCTGCGATCACGTGGATATACAGTTTCATTTCCCTTCTAATGTTC
CCTGCAAACTGATAGAATGGGGTATACGACTGATAGAGGATTTTTCATCACCGGAGAACCAACTATTTAGTCCATCCACT
GATGAACAGAATGTGGCTGATGAGTCTGACCACGGTGAAGAGTGTGAAGTCCAGGGCTGTTTTTCATTTGTGAATCTGTT
TTTTGCTATTTGTCAATGGTGA |
AA seq | Len:1154 aa
MDYCNWLYDVFPSFSGEDVRINFLSHFLKELDRKLIKAFKDNEIERSHSIAPALVTAIRTSRIAVVVFSPKYASSSWCLD
ELVEIVRCMEELGQLVLPIFYGLDPSHVRKQTGKFGEGFAKTCKMKTKAVNLYKLKIRWQQALTVVANLLGYHSQNFNNE
AKMIEVIVNDLLGKLNFTPSKDFEECVGIEDHIAEMSLLLDMESEEVRMVGIWGPSGIGKTTIARALFSRLSRRFQCSVF
IDRKFISKIMEGYRGANPDDYNMKLSLQRHFLSEILGTRHIQIDHLGAVENRLKNQKVLISIDDLDDQVVLDVCAGQAHW
FGSGSRIIVVTKDRHFLRAHGIDHIYEVCLPSEERALEILCRSAFKQNSPREGFEKLAVEVTRHAGSLPLGLTVLGSTLR
GRDKAYWMDILPTLQNGVGEEIDKTLRISYDGLNREEDKVIYRHIACLFNGEKVPYIKLLLEDRNLGVNVGIENLVDKSL
IHVRSDTVEMHSLLQEIGRKIVRAQSIDEPGNREFLVDLDDICDVLSENSGTKKVLGVALDMDKIHDELHVHENAFKGMS
NLRFLKFYTFGKEARLRLNESFDYLPSKLRLLCWDKYPMRCLPSKFCPQNLVILEMKNSNLENLWEGVSPLGHLKKMDLW
GSKNLKEIPDLSKATSLEKLDLKGCSSLVELPSSISKLNKLTELNMPSCTNLETLPTGMNLESLNRLNLKGCTRLRIFPN
ISRNISELILDETSITEFPSNLYLENLNLFSMEGIKSEKLWKRAQPLTPLMTMLSPSLRILSLSDIPSLVELPSSFQNLH
KLTNLSITRCKNLEILPMGINLPSLIRLILSGCSRLRSFPDISRNVLDLNLSQTGIEEIPSWVEDFSRLKYLFMESCPKL
KYVSISTLIHLEMVDFSNCGALTGAGMIGYQSGEAMRPDDIETEVLAPEEASSSLQDNFLPRVKFRFINCFDLNLEALLQ
QQSVFEQLILSCEEVPSYFTHKATGASTSLTVPLLQTSLSRQIFRLRACAVVVFDPIPTLGSVCVYIKVSCRFKDEHGNY
FDSAYHQENITAYKKGGHMFIFDYCFPLNEDNAHLAKISCDHVDIQFHFPSNVPCKLIEWGIRLIEDFSSPENQLFSPST
DEQNVADESDHGEECEVQGCFSFVNLFFAICQW* |
Expression(FPKM) | |
Classification(Core/Distributed) | |
Function classfication (GO) | GO:0005515 |
Pfam | Leucine Rich Repeat |
KEGG | disease resistance protein TAO1-like; K19613 leucine-rich repeat protein SHOC2 (A) |
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