Gene Name | BnaA09G0223800ZS |
Gene Location | |
Gene Structure | |
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Protein Name | |
Alternative splicing | |
Homology | |
Best Hit (NR) | BnaA09g53570D [Brassica napus] |
Best Hit (SwissProt) | Vesicle-associated protein 1-4 OS=Arabidopsis thaliana GN=PVA14 PE=2 SV=1 |
NT seq | Len:1233 nt
ATGGCGATCATCTCTCCTACTAAGTCCCATCAAGTGTTCTTCAACTACAGAGGAGAGCAACTGCGTCACAGCTTCGTGAG
TCATCTCACTGATGCTTTTGAACGGCATGGGATTAACTTCATCGTTGACAAATACGAGCAGAGAGGCAAAGATCTCAAAA
ATATCTTTGCAAGGATCGAAGAGTCGAGCATTGCGCTTGCCATCTTCTCTACCAGGTTGTATCCTGAGTCGAGCTGGTGC
ATGGATGAGTTAGTGAAGATGAAGAAACTAGCTGATAAAGGGAAGATCCAAGTCATTCCAATCTTTTACAAGGTGAGCGC
ACGAGACGTGAGGAGACAGACGGGTAAGTTTGGAGATAAATTCTGGAATCTCGCCAGAGCTTCTATTACTAGCGGAGATC
AGATCAAGAAATGGAAGGAAGCGTTGGAATGTATATCAGGAAAGATGGGTTTGTCGTTGAAAAACAAGAGATATGAGATG
GACATGTTGGCTTTCTCTGGTTGCACTCAGGAAGAAGCTGAAGAGCTCAAAAAGATGAGGTATGCATATCCATGGTGGAA
AGAGAAAGAGGTAGTGAAAAAGGAAATGCTATTAGACTCAACGGAACTGCAACATTTTCAGAACCATTCATCAGCTCTAG
ATTTCATTGTATCAGTAGCCAGCGACACTTTTATTCCTACCTACTATGGAAACATGGCTAAAGTTGTTGAAGTGCCGATC
TCTGCTTCTCACCGGCGTCTCCTCCGACGTCGGATCAGCAGCCATTTCTCTGCTCCGGTCCCGCCGGCGCAGATGAAGAA
GAAGAAACCGAAGATTTCTCCGAGGAAATCCCCGAAGAAGAAGAAGCCCACCCCGAAATCGCCGCCATCTTCAGTGTCGG
CAAAATCAACCACTAGCCTTAGTGACTTTCACCCGATTGACCCCTCGTTTGTTTCTGATGCCCAAATCGGCGGCCCCGCT
GACAAGGATGCTCAACAATCGATTGCTCACTCGGATCTGGTCCTAGAATTGGTAGCGCTTCCGACAAATCCATCTCCATC
TCGTGAAGAATTACAAGACTCTGTTCTAGAGTCTAACCTAGAGTCGAGCCCTGTCGGTGCGCCGATTAGCTCCTCTGTCT
CAACCCCGGAAAAGCTAGCTATCTCTAAGGAAAGCCAAGCCCCGGATGTGTCTCTTCCCGTAGTTTCTGTTGACGCCAAG
TTTGATGCTTTGAGCTCACAGTTCTTGGGATAA |
AA seq | Len:411 aa
MAIISPTKSHQVFFNYRGEQLRHSFVSHLTDAFERHGINFIVDKYEQRGKDLKNIFARIEESSIALAIFSTRLYPESSWC
MDELVKMKKLADKGKIQVIPIFYKVSARDVRRQTGKFGDKFWNLARASITSGDQIKKWKEALECISGKMGLSLKNKRYEM
DMLAFSGCTQEEAEELKKMRYAYPWWKEKEVVKKEMLLDSTELQHFQNHSSALDFIVSVASDTFIPTYYGNMAKVVEVPI
SASHRRLLRRRISSHFSAPVPPAQMKKKKPKISPRKSPKKKKPTPKSPPSSVSAKSTTSLSDFHPIDPSFVSDAQIGGPA
DKDAQQSIAHSDLVLELVALPTNPSPSREELQDSVLESNLESSPVGAPISSSVSTPEKLAISKESQAPDVSLPVVSVDAK
FDALSSQFLG* |
Expression(FPKM) | |
Classification(Core/Distributed) | |
Function classfication (GO) | GO:0005515 |
Pfam | TIR domain |
KEGG | hypothetical protein; K04646 clathrin heavy chain (A) |
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