Names & Information
Knowledge of BnaA09G0231100QU:
| Gene Name | BnaA09G0231100QU |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: probable WRKY transcription factor 19 isoform X2 [Brassica rapa] |
| Best Hit (SwissProt) | Probable WRKY transcription factor 19 OS=Arabidopsis thaliana GN=WRKY19 PE=2 SV=1 |
| NT seq | Len:2934 nt ATGACCAAACACGGAGTTAAAGAATCATCTTCACCGGGCGGCGGCAATCAACAGCAGAAGCAGAGACGCCAGCTTCAGAT CCGTGGTCATCGTCCTTCACCTCTCAGCATTCACAAAGACTCCCACATGATCAAGAAACCTCCCACGTTAACTCAGCGAG AGCCGGTGGTTGTCTCGCCCAAGGTCGTACACACCACCTTGAGTGATTTCAGGAGCGTCGTCCACCGACTCACCGGGGTT AACAACTCTGTTTCCCAACTACAATTTTCTGCATCATCCGCCTCTACTGATTATGAAGTCATAGTCATCTACAGGAGAGG TGACATCACCAATGATGCTTTTGTTAAGGTCGTCCAGCGACTCACCGGGATTCCTAACTCTGTCTCTGTGCCTCTTAACT CATACGTTGAAATTGAAAAAGGGTCCTCAAAGAATCTACAAGACACTGAACTAAGCACATCCGCCATTAGGGAATATGAT GTCGTAATCAGATACGTGAGAGGTTGCATAAGCAACGGTGATTTCATCACCCATCTTCGTGCTGCCCTCTGCCGGAGAGG GGTTTCTGTCCGAGAAGACATCGATGAAGTAGACACAGTTCCAGAATGTAGGGTTTTGATAATATTCTTAAGCAGCACAT ACGTCCCTTCCAACCTGGTAAACATTGTTGAACAACAACGTAAAAAGCCTCGAGTGGTTTACCCGATTTTTTATGGAATT TCACCATCTGATTTGATCAGTAACAGCAATTATGGGAGACCTTCTCACCAAGACGAGGCAAAAAGGTGGCAGGCTGCTTT GGAGGAAATAACTCAGATGCATGGCTACATATTGACAGATAAGTCCGAGTCTGACTTTATAGACGAGATTGTCAATGATG CTTTGGAGGTGCTACGTTCCAACTATAAGAAGAATATTATTGGGATGGATACGCAGATAAAGGAGATCTTGTCACTGCTA TGCATTGAGTCTCAAAATGTTCGCCGCATAGGTATATGGGGTGCGGTTGGTATAGGAAAAACAGCCATTGCTGAAGAAAT TTTCCATAGAATCTCTGTCCAATATGAGACTTGTGTCTTCCTCAAGGATCTCAACAAAGAAGTCGAGCTAAAAGGGTACG ATGCTGTGAGGGAGGAACTATTGTCTAAACTTTTAGAGGTAGAACCAGATGTCATACGTACTTCAAACATTAAAATGAGT TTCTTGAGGAGCAGGCTTCAGCGTAAAAGTGCCCTCGTAGTTCTCGACGATGTGAATGATTTCAGGGATGTTGAAACCTT CGCAGAGATGCTTAGCTATTTTGGTCCAAGAAGCAGAATAATCATAACGTCTAGGAACAGACATGTTTTTGTACTATGCA AAACCGATCATGTCTATGAGGTCAAGCCATTAGAATTTCCTAACTCTCTACATCTTCTGAACCCCGGAATATTTCAGAGT GGTCTGTCACCCGAGCTTTACAAGACATTGTCACTTGAGTTGGTCAAATTCTCAAATGGAAATCCTCAGGTTCTTCAGTT CTTAAGCAGATCCAGCAGAGAATGGAAAAGTTTATCCAAAGAAATTCAAAAATCTTCAGCCATTTACATTCCAGGTATAT TCGAAAGAAGCTGTTGTGGGCTTGATGAAAACGAAAAGTGTATATTTTTAGACATTGCATGTTTCTTTAGAAAGATGGAT AAAGACGACGTTGCAATGTTGCTTGATGGATGTGGTTTCTCTGCACATATTGGGTTTAAAAACCTTGTTGACAAATCACT GTTAACCATATCACACAATACGGTGGACATGCTCTGGTTCCTCCAGGCAACAGGCCGAGAAATTGTTCGCCAAGAATCTA TTGACAGGCCAGGAGACTGCAGCAGGTTGTGGAATTCTGAAGATATTAGAGACGTATTCCTAGACAACACTGGCACGTCA GATATTGAAGGGCTTTTCCTGGACATGTCGCAGCTGAAATTCGATGCAAGTCCCAATGTATTCGACAAAATGTGTAATCT TAGACTGTTAAAGTTTTATTTCTCCGAGTTGATAGAGAACCATGGAATGTCTTTACCTCAAGGTCTTGAATACTTGCCGA CCAAGCTAAGGCTTCTGCACTGGGAACACTATCCTATAAGCTCATTGCCGCAATGTTTTGATCCGAAGAACCTCATAGAG CTTAACATGCCAAGTAGTTGTGTGAAGAAACTTTGGAAAGGCAAAAAGAGTCTGGAAAACCTTAAAAAGATGAGACTGAG CTACTCCTACCAGTTAACAAAGCTTCCAAGACTTACAAGTGCGCAAAACCTCGAGCTTCTTGATCTTGAAGGTTGCAAGA GTTTGGTGAGCATTAGCCACTCTATCTGTTATCTTAAAAAGCTTGTTTCTCTGAATCTGAAGGACTGCTCGAATCTGGAG AGTGTACCATCTACAAGTGATTTAGAGTCTCTTGAGGTTTTGAATCTTTCTGGCTGCTCGAAGCTAGAGAATTTTCCGGA GATCTCACCAAATGTGAAAGAACTGTACTTGGGTGGGACTATGATACGAGAAATACCATCATCGATCAAGAACTTGATAC TTCTTGAAAAACTTGACCTGGAAAACAGCAGACGCCTCGTGATTCTTCCAATGAGCATATGCAAGTTAAAGCATCTCGAA ACGCTGAATCTGTCAGGCTGCTCAAGCCTTGAGTATTTTCCAGACTTCTCTAGAAAGATGAAATGCTTAAAGTCTTTGGA TTTGAGCAGGACGGCCATTAGAGAGCTACCCTCCTCCATTTCATATCTGACTGCTCTTGAAGAAGTAAGATTTGTGGGAT GCAAGAGCCTCGTAAGATTGCCTGACAACGCCTGGAGCCTAAGATTCAAGGTTGAATTCCGTCAGATTGATACAGAGAAG TTTTCGAAACTGTGGAATAGATTAGGTTGGCTCAAAAAAGTTCACATCTCTTAG |
| AA seq | Len:978 aa MTKHGVKESSSPGGGNQQQKQRRQLQIRGHRPSPLSIHKDSHMIKKPPTLTQREPVVVSPKVVHTTLSDFRSVVHRLTGV NNSVSQLQFSASSASTDYEVIVIYRRGDITNDAFVKVVQRLTGIPNSVSVPLNSYVEIEKGSSKNLQDTELSTSAIREYD VVIRYVRGCISNGDFITHLRAALCRRGVSVREDIDEVDTVPECRVLIIFLSSTYVPSNLVNIVEQQRKKPRVVYPIFYGI SPSDLISNSNYGRPSHQDEAKRWQAALEEITQMHGYILTDKSESDFIDEIVNDALEVLRSNYKKNIIGMDTQIKEILSLL CIESQNVRRIGIWGAVGIGKTAIAEEIFHRISVQYETCVFLKDLNKEVELKGYDAVREELLSKLLEVEPDVIRTSNIKMS FLRSRLQRKSALVVLDDVNDFRDVETFAEMLSYFGPRSRIIITSRNRHVFVLCKTDHVYEVKPLEFPNSLHLLNPGIFQS GLSPELYKTLSLELVKFSNGNPQVLQFLSRSSREWKSLSKEIQKSSAIYIPGIFERSCCGLDENEKCIFLDIACFFRKMD KDDVAMLLDGCGFSAHIGFKNLVDKSLLTISHNTVDMLWFLQATGREIVRQESIDRPGDCSRLWNSEDIRDVFLDNTGTS DIEGLFLDMSQLKFDASPNVFDKMCNLRLLKFYFSELIENHGMSLPQGLEYLPTKLRLLHWEHYPISSLPQCFDPKNLIE LNMPSSCVKKLWKGKKSLENLKKMRLSYSYQLTKLPRLTSAQNLELLDLEGCKSLVSISHSICYLKKLVSLNLKDCSNLE SVPSTSDLESLEVLNLSGCSKLENFPEISPNVKELYLGGTMIREIPSSIKNLILLEKLDLENSRRLVILPMSICKLKHLE TLNLSGCSSLEYFPDFSRKMKCLKSLDLSRTAIRELPSSISYLTALEEVRFVGCKSLVRLPDNAWSLRFKVEFRQIDTEK FSKLWNRLGWLKKVHIS* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | hypothetical protein; K19613 leucine-rich repeat protein SHOC2 (A) |