Names & Information
Knowledge of BnaA09G0231400QU:
| Gene Name | BnaA09G0231400QU |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaA09g21200D [Brassica napus] |
| Best Hit (SwissProt) | Probable WRKY transcription factor 19 OS=Arabidopsis thaliana GN=WRKY19 PE=2 SV=1 |
| NT seq | Len:3669 nt ATGCTCAACAAGAGAATCGAGGCTAACTCCAGTGAAGCCACACACAGATCCAAAAAAGCCACACGTCTCGAGAGGATGAG CAGTAACGAGGAGTGTAACAGGAGGGGGAACGACGGTTGGAAGAGCAGATGTGGCGGCAGTGACGACGGTGACGACGAGA GACGCGGCGGATTTGCAGTCCAAGAGGCACTGAGCGGCGAGCTCGATTCACTTGTGTTCGTCGATGGAGCTGCTATGGTT TCTTGCGGACGGAAAAAACAGAGGACACGGTATGAAACAGATGCAGAGTTTTTGGCTCTTGCATCTCCATCATCTCTTTT GCTATTTTCTACAAATCGATATAACAAAAATGGAAAACTAAATCGAAATAGAACCAAGATCCGGATCGTACACCTCTCTA GTGATTCAGTCTTACGAACGCTTCCAGAGATGCTGCAGCAACCATGGTTTAAGCTACGTTTCATAAATTCGCCGTCACCG ACGATATTCACGGCTTCAAGGATTGAGGCGGAAGACGGTTCTCCGATAGCAATCGAGCTTGTTGACGCCGTCTCAAACAC TCGAATTACCTCAGGGCCGCTTTCGTCTTCGCGTGTCGAGATAGTCGCCCTAGACGCCGACCTCACTGAAGAAAGTTGGA CAACGGAGGTGTTCAACCGGAATCTACTGTGGTCACGGGAAGGGAAACGATCATTGCTGGTCGGAGATCTGATCGTGATA CTTAAAGACGGGACCGGAGTGATCAGCGGGGAGATATCGTTCACGGATGATTCGAGCTGGTTGAAGGATGGTAAGTTCCG ATTAGGTGCTAGAGCGACAGAAGGAGGAGTTGTGGAGGCGGTAACTAACGCCTTCGCGTGCTTAGCTCATCGACAAGGAT TTTATCCCGGATCTGGGATTTGGAGTCTACCAAAGCCGCGTTCCGACTTGTGGATCTATGATCATCATCGCAGAAGCTTT GGGGACTACGAGCCGCCCAACACTTCTCAAGAGAAGAGGATTAAGAAAGCTGTCTCGCTGTCGAACATTGTCTATCCACC CCGCGGGATTTCAGACATTGATTTGTTTTCGTATAAGAATTTGGATCCATTATCACTTACAGGCTTTACATCAGATTACT TAGATAATCTGGAATTTCCAGACGCTACAAGAAGCAGAATTGCCTCTCAGCCTCAGCTTCTAAGTGGATCATCTGCCCCT AAAGATTATGATGTTGTAATTAGGTACAGGAGAGGGGACGTAAACAACGAGGATTTCATTAGCCATCTTCTTGCTGCCCT CTCCCGTAGAAGGATTTCTGTCTATGGAGACTTTGATGAAGTGGATTCAGTGCAGGAATGTAAGGTTTTGATCATCTTAT TAACCAGCACATACGTCCCTCCGAATCTCTTAAGCATTGTTGAACAACAACGAAAAGAGCCTCAAGTGGTTTATCCGATT TTTTATGGAATATCACCATCTGATTTGATCAGTAACAGCAAGTATTATGAGGGACTTTTGCTTCAAGATGAGCCTGAACG ATGTCATGCTGCTTTGAGGGAAATAACTCAGATGCCTGGCTACATATTGACAGATAAATCTTGCAGGTCCGAGTCTGAAC TTATAGCTGAGATTGTTAGAGACGCTCTGAAGGTGCTATGTTCCTATGATGATAAGAAAATGATTGGGATGGGTACGCAG ATAAAGGATATTTTGTCACTGCTATGCATTGAATCCCCAGATGTTCGCAGCGTAGGTATATGGGGAACGGTTGGTATAGG AAAAACAGCCATTGCTGAAGAAATCTTTCGTAGAATCTCTGTCCAATTTGTGACTTGTGTCTTCCTGAAGGACCTTCATC AAGAAGTAGAATTAAAAGGTCCTGATGCTGTGAGAGAGAAGTTATTATCGGAAGTTTTAGAGGTAGAACCACGTGTTATT CGAATTTCCGGCAGGAAAACAAGTTTCTTGAGGAATAGGCTTCAATGTAAAAAGGTCCTGGTAGTTCTCGACGATGTGAA TGATTTCAGAGATGTTGAAACCTTTTTGGGAAAGCTTAGCTATTTTGGTCCAGGAAGCAGAATAATCATAACCTCGAGGA ACAGACGTGTTTTCGTGCTATGCAAAATCAATCATGTCTATAAAGTCAAGCCATTAGAAAGTTATAAGGCTCTACGACTT CTCAATCTCGGGGCACGTCCGAGTTTTTTCTCACTCAAGCCTACAAGGACATACTCACCACAGCTGGTCAAATTCTCAAA TGGAAATCCCATGGTTCTTCAGTTCTTAAGCAGGTCGAGCAGAGAATGCTTATCAAAAGAAATTCGGAAATCTTCTGCCA TTTACATTCCAGGTATATTCGAAAGAAGCTGCTGTGGGCTTGATGACAACGAAAAGAGTATATTTTTAGACGTTGCATGT TTCTTTAGAAGGATGGATAAAGACGATGTCGCAATGTTGCTTGATGGATGTGGTTTCTCTGCACATATTGGGTTTAAAAA CCTTGTTAACAAATCACTGTTAACCATATCACACAATATGGTGGACATGCTCTGGTTCCTCCAGGCAACAGGTCGAGAAA TTGTTCGCCAAGAATCAATTGACAGGCCAGGAGACCGCAGCAGGTTGTGGAATGCTGAAGATATTAGGGATGTATTCATA GATAACACTGGCACAGCAGCTATTGAGGGGATTTTTCTGGACATGTCACAGCTGAAATGTGATGCCAATGCCAATGTATT CGACAAAATGTGTAACCTTAGACTGTTAAAGTTTTATTTCTCTAAAGTGGTAGAGAACCATGGAGTATCTTTACCTCAAG GCCTTGAATATTTGCCGAGCAAGCTAAGGCTTCTGCACTGGGAATGCTATCCTATAAGCTCATTGCCGCAATGTTTTGAT CCAAAGAACCTCATAGAGCTTAACATGCCAAATAGTTGTGTGAAGAAACTTTGGAAAGGCAAAAAGAGTCTGGAAAAGCT TAAAAAGATGAGACTTAGTTACTCCCACCAGTTAACAAAAATCCCAAGACTTTCAAGAGCGCAGAATCTCGAGCTTCTTG ATCTTGAAGGTTGCAAGAGTTTGGTGAGCATCAGCCAGTCTATCTGTTATCTTAAAGAGCTTGTTATTCTGAATCTGAAG GACTGCTCGAATCTGGAGAGCATACCATCTACGGTTGATTTAGAGTCTCTTGAGGTTTTGAATCTCTCTGGCTGCTCGAA GCTAGAGAATTTCCCGGAGATCTCGCCAAATGTGAAAGAACTGTACTTGGGTGGGACTATGTTACAAGAAATACCTTCAT CGCTTAAGAACTTGGTACTGCTTGAAAAACTTGATCTGGAAAACAGCGGACACCTCGTTAATCTTCCACCGAGCATCTGC AAGTTGAAACATCTTGAAACACTGAATCTGTCAGGCTGCTCAAGCCTTGAGCGATTTCCAGACTTGTCTAGAAAGATGAA ATGCTTAAAGTCTCTGGATTTAAGCAGAACGGCCATTAAAGAGCTACCCTCCTCCATTTCATACCTGACTGCTCTTGAAG AACTGAGATGTGTCGCCTGCAGGAGCCTCGTAAGGTTACCTGATAATATGTGGAGCCTAAGATTCAAGGTTCAATTCCGC CAAATTGACACACAGAAGTTTTCACGACTGTGGAATAGATTAGGTTGGCTTAAGAAAGTTCATACTTAG |
| AA seq | Len:1223 aa MLNKRIEANSSEATHRSKKATRLERMSSNEECNRRGNDGWKSRCGGSDDGDDERRGGFAVQEALSGELDSLVFVDGAAMV SCGRKKQRTRYETDAEFLALASPSSLLLFSTNRYNKNGKLNRNRTKIRIVHLSSDSVLRTLPEMLQQPWFKLRFINSPSP TIFTASRIEAEDGSPIAIELVDAVSNTRITSGPLSSSRVEIVALDADLTEESWTTEVFNRNLLWSREGKRSLLVGDLIVI LKDGTGVISGEISFTDDSSWLKDGKFRLGARATEGGVVEAVTNAFACLAHRQGFYPGSGIWSLPKPRSDLWIYDHHRRSF GDYEPPNTSQEKRIKKAVSLSNIVYPPRGISDIDLFSYKNLDPLSLTGFTSDYLDNLEFPDATRSRIASQPQLLSGSSAP KDYDVVIRYRRGDVNNEDFISHLLAALSRRRISVYGDFDEVDSVQECKVLIILLTSTYVPPNLLSIVEQQRKEPQVVYPI FYGISPSDLISNSKYYEGLLLQDEPERCHAALREITQMPGYILTDKSCRSESELIAEIVRDALKVLCSYDDKKMIGMGTQ IKDILSLLCIESPDVRSVGIWGTVGIGKTAIAEEIFRRISVQFVTCVFLKDLHQEVELKGPDAVREKLLSEVLEVEPRVI RISGRKTSFLRNRLQCKKVLVVLDDVNDFRDVETFLGKLSYFGPGSRIIITSRNRRVFVLCKINHVYKVKPLESYKALRL LNLGARPSFFSLKPTRTYSPQLVKFSNGNPMVLQFLSRSSRECLSKEIRKSSAIYIPGIFERSCCGLDDNEKSIFLDVAC FFRRMDKDDVAMLLDGCGFSAHIGFKNLVNKSLLTISHNMVDMLWFLQATGREIVRQESIDRPGDRSRLWNAEDIRDVFI DNTGTAAIEGIFLDMSQLKCDANANVFDKMCNLRLLKFYFSKVVENHGVSLPQGLEYLPSKLRLLHWECYPISSLPQCFD PKNLIELNMPNSCVKKLWKGKKSLEKLKKMRLSYSHQLTKIPRLSRAQNLELLDLEGCKSLVSISQSICYLKELVILNLK DCSNLESIPSTVDLESLEVLNLSGCSKLENFPEISPNVKELYLGGTMLQEIPSSLKNLVLLEKLDLENSGHLVNLPPSIC KLKHLETLNLSGCSSLERFPDLSRKMKCLKSLDLSRTAIKELPSSISYLTALEELRCVACRSLVRLPDNMWSLRFKVQFR QIDTQKFSRLWNRLGWLKKVHT* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | hypothetical protein; K19613 leucine-rich repeat protein SHOC2 (A) |