Names & Information
Knowledge of BnaA09G0238900GG:
| Gene Name | BnaA09G0238900GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaA09g21200D [Brassica napus] |
| Best Hit (SwissProt) | Probable WRKY transcription factor 19 OS=Arabidopsis thaliana GN=WRKY19 PE=2 SV=1 |
| NT seq | Len:3243 nt ATGCTGCAGCAACCATGGTTTAAGCTACGTTTCATAAATTCGCCGTCACCGACGATATTCACGGCTTCAAGGATTGAGGC GGAAGACGGTTCTCCGATAGCAATCGAGCTTGTTGACGCCGTCTCAAACACTCGAATTACCTCAGGGCCGCTTTCGTCTT CGCGTGTCGAGATAGTCGCCCTAGACGCCGACCTCACTGAAGAAAGTTGGACAACGGAGGTGTTCAACCGGAATCTACTG TGGTCACGGGAAGGGAAACGATCATTGCTGGTCGGAGATCTGATCGTGATACTTAAAGACGGGACCGGAGTGATCAGCGG GGAGATATCGTTCACGGATGATTCGAGCTGGTTGAAGGATGGTAAGTTCCGATTAGGTGCTAGAGCGACAGAAGGAGGAG TTGTGGAGGCGGTAACTAACGCCTTCGCGTGCTTAGCTCATCGACAAGGATTTTATCCCGGATCTGGGATTTGGAGTCTA CCAAAGCCGCGTTCCGACTTGTGGATCTATGATCATCATCGCAGAAGCTTTGGGGACTACGAGCCGCCCAACACTTCTCA AGAGAAGAGGATTAAGAAAGCTGTCTCGCTGTCGAACATTGTCTATCCACCCCGCGGGATTTCAGACATTGATTTGTTTT CGTATAAGAATTTGGATCCATTATCACTTACAGGCTTTACATCAGATTACTTAGATAATCTGGAATTTCCAGACGCTACA AGAAGCAGAATTGCCTCTCAGCCTCAGCTTCTAAGTGGATCATCTGCCCCTAAAGATTATGATGTTGTAATTAGGTACAG GAGAGGGGACGTAAACAACGAGGATTTCATTAGCCATCTTCTTGCTGCCCTCTCCCGTAGAAGGATTTCTGTCTATGGAG ACTTTGATGAAGTGGATTCAGTGCAGGAATGTAAGGTTTTGATCATCTTATTAACCAGCACATACGTCCCTCCGAATCTC TTAAGCATTGTTGAACAACAACGAAAAGAGCCTCAAGTGGTTTATCCGATTTTTTATGGAATATCACCATCTGATTTGAT CAGTAACAGCAAGTATTATGAGGGACTTTTGCTTCAAGATGAGCCTGAACGATGTCATGCTGCTTTGAGGGAAATAACTC AGATGCCTGGCTACATATTGACAGATAAATCTTGCAGGTCCGAGTCTGAACTTATAGCTGAGATTGTTAGAGACGCTCTG AAGGTGCTATGTTCCTATGATGATAAGAAAATGATTGGGATGGGTACGCAGATAAAGGATATTTTGTCACTGCTATGCAT TGAATCCCCAGATGTTCGCAGCGTAGGTATATGGGGAACGGTTGGTATAGGAAAAACAGCCATTGCTGAAGAAATCTTTC GTAGAATCTCTGTCCAATTTGTGACTTGTGTCTTCCTGAAGGACCTTCATCAAGAAGTAGAATTAAAAGGTCCTGATGCT GTGAGAGAGAAGTTATTATCGGAAGTTTTAGAGGTAGAACCACGTGTTATTCGAATTTCCGGCAGGAAAACAAGTTTCTT GAGGAATAGGCTTCAATGTAAAAAGGTCCTGGTAGTTCTCGACGATGTGAATGATTTCAGAGATGTTGAAACCTTTTTGG GAAAGCTTAGCTATTTTGGTCCAGGAAGCAGAATAATCATAACCTCGAGGAACAGACGTGTTTTCGTGCTATGCAAAATC AATCATGTCTATAAAGTCAAGCCATTAGAAAGTTATAAGGCTCTACGACTTCTCAATCTCGGGGCACGTCCGAGTTTTTT CTCACTCAAGCCTACAAGGACATACTCACCACAGCTGGTCAAATTCTCAAATGGAAATCCCATGGTTCTTCAGTTCTTAA GCAGGTCGAGCAGAGAATGCTTATCAAAAGAAATTCGGAAATCTTCTGCCATTTACATTCCAGGTATATTCGAAAGAAGC TGCTGTGGGCTTGATGACAACGAAAAGAGTATATTTTTAGACGTTGCATGTTTCTTTAGAAGGATGGATAAAGACGATGT CGCAATGTTGCTTGATGGATGTGGTTTCTCTGCACATATTGGGTTTAAAAACCTTGTTAACAAATCACTGTTAACCATAT CACACAATATGGTGGACATGCTCTGGTTCCTCCAGGCAACAGGTCGAGAAATTGTTCGCCAAGAATCAATTGACAGGCCA GGAGACCGCAGCAGGTTGTGGAATGCTGAAGATATTAGGGATGTATTCATAGATAACACTGGCACAGCAGCTATTGAGGG GATTTTTCTGGACATGTCACAGCTGAAATGTGATGCCAATGCCAATGTATTCGACAAAATGTGTAACCTTAGACTGTTAA AGTTTTATTTCTCTAAAGTGGTAGAGAACCATGGAGTATCTTTACCTCAAGGCCTTGAATATTTGCCGAGCAAGCTAAGG CTTCTGCACTGGGAATGCTATCCTATAAGCTCATTGCCGCAATGTTTTGATCCAAAGAACCTCATAGAGCTTAACATGCC AAATAGTTGTGTGAAGAAACTTTGGAAAGGCAAAAAGAGTCTGGAAAACCTTAAAAAGATGAGACTGAGCTACTCCTACC AGTTAACAAAGCTTCCAAGACTTACAAGTGCGCAAAACCTCGAGCTTCTTGATCTTGAAGGTTGCAAGAGTTTGGTGAGC ATTAGCCACTCTATCTGTTATCTTAAAAAGCTTGTTTCTCTGAATCTGAAGGACTGCTCGAATCTGGAGAGTGTACCATC TACAAGTGATTTAGAGTCTCTTGAGGTTTTGAATCTTTCTGGCTGCTCGAAGCTAGAGAATTTTCCGGAGATCTCACCAA ATGTGAAAGAACTGTACTTGGGTGGGACTATGATACGAGAAATACCATCATCGATCAAGAACTTGATACTTCTTGAAAAA CTTGACCTGGAAAACAGCAGACGCCTCGTGATTCTTCCAATGAGCATATGCAAGTTAAAGCATCTCGAAACGCTGAATCT GTCAGGCTGCTCAAGCCTTGAGTATTTTCCAGACTTCTCTAGAAAGATGAAATGCTTAAAGTCTTTGGATTTGAGCAGGA CGGCCATTAGAGAGCTACCCTCCTCCATTTCATATCTGACTGCTCTTGAAGAAGTAAGATTTGTGGGATGCAAGAGCCTC GTAAGATTGCCTGACAACGCCTGGAGCCTAAGATTCAAGGTTGAATTCCGTCAGATTGATACAGAGAAGTTTTCGAAACT GTGGAATAGATTAGGTTGGCTCAAAAAAGTTCACATCTCTTAG |
| AA seq | Len:1081 aa MLQQPWFKLRFINSPSPTIFTASRIEAEDGSPIAIELVDAVSNTRITSGPLSSSRVEIVALDADLTEESWTTEVFNRNLL WSREGKRSLLVGDLIVILKDGTGVISGEISFTDDSSWLKDGKFRLGARATEGGVVEAVTNAFACLAHRQGFYPGSGIWSL PKPRSDLWIYDHHRRSFGDYEPPNTSQEKRIKKAVSLSNIVYPPRGISDIDLFSYKNLDPLSLTGFTSDYLDNLEFPDAT RSRIASQPQLLSGSSAPKDYDVVIRYRRGDVNNEDFISHLLAALSRRRISVYGDFDEVDSVQECKVLIILLTSTYVPPNL LSIVEQQRKEPQVVYPIFYGISPSDLISNSKYYEGLLLQDEPERCHAALREITQMPGYILTDKSCRSESELIAEIVRDAL KVLCSYDDKKMIGMGTQIKDILSLLCIESPDVRSVGIWGTVGIGKTAIAEEIFRRISVQFVTCVFLKDLHQEVELKGPDA VREKLLSEVLEVEPRVIRISGRKTSFLRNRLQCKKVLVVLDDVNDFRDVETFLGKLSYFGPGSRIIITSRNRRVFVLCKI NHVYKVKPLESYKALRLLNLGARPSFFSLKPTRTYSPQLVKFSNGNPMVLQFLSRSSRECLSKEIRKSSAIYIPGIFERS CCGLDDNEKSIFLDVACFFRRMDKDDVAMLLDGCGFSAHIGFKNLVNKSLLTISHNMVDMLWFLQATGREIVRQESIDRP GDRSRLWNAEDIRDVFIDNTGTAAIEGIFLDMSQLKCDANANVFDKMCNLRLLKFYFSKVVENHGVSLPQGLEYLPSKLR LLHWECYPISSLPQCFDPKNLIELNMPNSCVKKLWKGKKSLENLKKMRLSYSYQLTKLPRLTSAQNLELLDLEGCKSLVS ISHSICYLKKLVSLNLKDCSNLESVPSTSDLESLEVLNLSGCSKLENFPEISPNVKELYLGGTMIREIPSSIKNLILLEK LDLENSRRLVILPMSICKLKHLETLNLSGCSSLEYFPDFSRKMKCLKSLDLSRTAIRELPSSISYLTALEEVRFVGCKSL VRLPDNAWSLRFKVEFRQIDTEKFSKLWNRLGWLKKVHIS* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | hypothetical protein; K19613 leucine-rich repeat protein SHOC2 (A) |