Names & Information
Knowledge of BnaA09G0239000GG:
| Gene Name | BnaA09G0239000GG |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | BnaA09g21220D [Brassica napus] |
| Best Hit (SwissProt) | Disease resistance protein RPS4 OS=Arabidopsis thaliana GN=RPS4 PE=2 SV=1 |
| NT seq | Len:2958 nt ATGGGCGGGATTGGTAAAACTACTCTTGCTGAATGCTTGCATGAACGGATGCGAGTTCAATTCGACGGAAGCTGCTTTCT TACAAACATCCGTGAAAAGTCAAGTAAAAGCGGATTAGAGTCTTTGCTGCAGGAACTCTTCTCTGAATTACTTAATGATA AGCATATTAAAATCGGAGCTCCTGGAAATGCACATGAAAGATTTGAGCGCAGGCTCAAGAGCAAGAGGCTGCTTATTGTG CTTGATGATGTGAACGATGAGAAGCAGATTAGATATCTTATGGGGCACTGCAGATGGTATCAAGGAGGAAGTAGGATTAT CATAACTACTAGAGATAGTCAACTAGTCGAGGCAGTCAAGGGTCGAAAGTATGTGCTCCCTAAACTGAATGATAGAGAAG CCTTGAAGCTCTTCAGCTTGAATGCATTTAATGCCTCTTGCCCTTCGAGTGAGTTTGTGAGGTTGGCAAACATGGTTCTG GATTATGCTAAAGGTCACCCTTTGGCTCTTAAGGTGTTAGGGTCTGATCTTTTTGAGGAGAATACTCTGTACTGGGAAGC TAAATTGAGTAGACTGACAAGTAAATCACATGGACAGATCTATGAAGTTCTGGAAACAAGCTATGAGGAGCTTAGCTTTG ACCAGAAGAATGTTTTTCTGGATATTGCATGTTTCTTCAGATCAGAGAAGGTGGACTACGTGAAAAGCCTTCTCAACAGT CATGGTGTGGACGTGTCTAGCGTGATAGAGGATCTACTTGACAAATGTTTGATTACTCTTTCTGATAATCGCATCGAGAT GCATGACATGTTGCAGACTATGGGCAAAGAGATTAGCCTAAAACCAGAAACCATAGGAATAAGGGACTTTAGGCGACTAT GGGACAGTGATTATATTTGTTACCTTCTGACCAAAGGCTTGGGAACTGACATGATAAGAGGAATTTTCCTGGACACATCA AAACAAGGAACAATGCGTCTAAGCGCCAAAGCATTCAAAGGGATGTGCAATCTCAAATACCTGAAAATTTATGATTCGCG TTGCTCACGTGGATGTGAAGTGGATTGTAAACTGCTCCTACGTAAGGGGCTTGATTTCCTTTCTGATGAGCTTACATATC TACACTGGTATGGATGCCCTCTACAGAGTCTCCTTCTGAACTTTGACCCCAAGAACCTTGTAGACCTTAAGCTTCCATAT AGTGAGTTAGAAGACATTTGGGACAAAGACAAGGATGCTGGAATGCTCAAATGGGTGGATCTCAGTCACTCGTTGAGATT AAGCCGATGTTCAGGTTTGGCTAATGCTCAAAATCTTGAGAGGTTGAATCTAGAAGGATGTACAAGTTTGAAGAAGTTGC CATCATCCATGAAATGTTTGGAGAAGCTTATTTACCTAAATCTCAGGGAGTGCACAAGTCTCAAGAATTTTCCAAAAGGA CTCAAAACTCAATCCTTGGAAACTCTTATTCTCAGTGGCTGCTCCAGTTTCAGGAAATTCCCAATGATCTCAGAAAATGT TGAAGTTCTACTTTTAGATGGCACAGCTATCAAGAGTCTTCCTGAATCCATTGAAAGCTTGAGAAAACTTGGTATGCTGA ATTTGAAAAACTGCAAAAAGCTGAAGCATCTTTCTTCTGATCTTTATGAGCTGAAATGTCTCCAAGAGCTAACACTCTCA GGATGCTTACAGCTAGAAGTTTTTCCGGAAATCAAGGAAGCCATGGAATCTTTGGAGATTTTACTTCTGGATGATACAGC CATCACTGAGATGCCAAACATGATGCATCTAAGAAATATCAAGACATTTTCTTTGTGTGGAACAAACAGTCAAGTTTCTG TTAGTATATTCTTCTTGCCACCTCCATTGGGCTGCTCTCAGTTAACGGATCTTTACCTCTCACGATGCGGTCTGGACAAA CTACCAGATGATATAAGTGGCCTATCCTTGTTGCAGTCTTTATGCTTAAGCGGAAACAACATCGAGAATCTGCCTGAGAG CTTCAACCAGCTTCACAATCTGAAATGGTTTGATCTTAAGTATTGCAAAATGCTCAAGTCTCTACCAACCCTTCCACAGA ATCTGCAATATCTGGACGCTCATGAGTGCGAGTCACTTGAAACTCTGGCAAATCCATTGACTCCTTTGACAGTAGGAGAG AGGATACATTCTATGTTCATCTTTACCAACTGTCAGAAGCTGAACCAAGATGCTCAAGAGTGTCTTGTAGGTCATGCTCG GGTCAAGAGTCAGTTGATGGCTAATGCTTCTGTGAAACGTTATTACCGGGGATTTATACCAGAACCTCTGGTTGGAATCT GTTACCCGGCGAATGAAATACCAAGCTGGTTCTGCCACCAAAGACTAGGACATTCACTAGAAATCCCATTGCCTCCTCAT TGGTGTGACACTAACTTTGTTGGACTTGCCTTATCTGTAGTTGTCTCATTCAAAGACTATGAAGACCGTGCTAAGCGTTT CTCGGTTAAGTGCTCCGGCAAATTCGATAACCAAGACGGTTCCTTCACAGGATTTGACTTTACTCTGGCCGGCTGGAACG AACCCTGTGGATCGCTTAGCCATGAACCAAGAAAGCTTACTTCTGACCATGTTTTCATGGGATACAACAGTTGTTTCCAC GTCAAGAAACTCCATGGAGAGAGTAGCAGCTGCTGTTACACAAAGGCTTCTTTCGAATTCTATGCAACGGATGATGAAAG GAACAAGAAGCTCGAGACTTGTGAGGTGGTCAAATGTGGGATGAGTTTAGTGTATGTTCCTGATGATCATACTTGTATGT TGTTGAAGAAGACGAATCTGGTTCAGTTGTGTACGAATACCGAACCAAGCTGTTCCTACGGTCTTGATGATGTCAGACTC AAGAGAGGACGATGCCAGGTTGGTGGTGGTGATGAAGAAGCAGATTGTAAGAGAACGAAAGAGAAGATTTTGGTGTGA |
| AA seq | Len:986 aa MGGIGKTTLAECLHERMRVQFDGSCFLTNIREKSSKSGLESLLQELFSELLNDKHIKIGAPGNAHERFERRLKSKRLLIV LDDVNDEKQIRYLMGHCRWYQGGSRIIITTRDSQLVEAVKGRKYVLPKLNDREALKLFSLNAFNASCPSSEFVRLANMVL DYAKGHPLALKVLGSDLFEENTLYWEAKLSRLTSKSHGQIYEVLETSYEELSFDQKNVFLDIACFFRSEKVDYVKSLLNS HGVDVSSVIEDLLDKCLITLSDNRIEMHDMLQTMGKEISLKPETIGIRDFRRLWDSDYICYLLTKGLGTDMIRGIFLDTS KQGTMRLSAKAFKGMCNLKYLKIYDSRCSRGCEVDCKLLLRKGLDFLSDELTYLHWYGCPLQSLLLNFDPKNLVDLKLPY SELEDIWDKDKDAGMLKWVDLSHSLRLSRCSGLANAQNLERLNLEGCTSLKKLPSSMKCLEKLIYLNLRECTSLKNFPKG LKTQSLETLILSGCSSFRKFPMISENVEVLLLDGTAIKSLPESIESLRKLGMLNLKNCKKLKHLSSDLYELKCLQELTLS GCLQLEVFPEIKEAMESLEILLLDDTAITEMPNMMHLRNIKTFSLCGTNSQVSVSIFFLPPPLGCSQLTDLYLSRCGLDK LPDDISGLSLLQSLCLSGNNIENLPESFNQLHNLKWFDLKYCKMLKSLPTLPQNLQYLDAHECESLETLANPLTPLTVGE RIHSMFIFTNCQKLNQDAQECLVGHARVKSQLMANASVKRYYRGFIPEPLVGICYPANEIPSWFCHQRLGHSLEIPLPPH WCDTNFVGLALSVVVSFKDYEDRAKRFSVKCSGKFDNQDGSFTGFDFTLAGWNEPCGSLSHEPRKLTSDHVFMGYNSCFH VKKLHGESSSCCYTKASFEFYATDDERNKKLETCEVVKCGMSLVYVPDDHTCMLLKKTNLVQLCTNTEPSCSYGLDDVRL KRGRCQVGGGDEEADCKRTKEKILV* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | hypothetical protein; K16226 disease resistance protein RPS4 (A) |