Names & Information
Knowledge of BnaA09G0242800ZS:
| Gene Name | BnaA09G0242800ZS |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | disease resistance protein [Brassica rapa subsp. pekinensis] |
| Best Hit (SwissProt) | Probable WRKY transcription factor 19 OS=Arabidopsis thaliana GN=WRKY19 PE=2 SV=1 |
| NT seq | Len:2751 nt ATGAGGCAGAGACGGCAGCTTCAGATCCGTGGTGATCGTCCTTCACCTCTCAGTGTCCACAAAGACTCCCACAAGATTAA GAAACCTCCTCCTCATCGAGAGCCGGTGGTGGTCTCCTCGCCCAAGGTCATACACACCCCATTGAAGGATTTCAGAAGCG TCGTCCCCCGACTCACCGGGGTTGACAACTCTGTTTTGGAATTAGAATTCATTTCCGCCTTTGGACCATCTGCCTCGAGA GGTTATCAAGTCGTAACTATATACAGGAGAGGTGACATAAGCAATGATGATTTCAATAAGGTCGTCAGGCGACTCACAAG GAATCTTAACTCTGTTTCAGACCTTAGCAACTCTGCCTCTGAGTTTAGCACACCTGCTGCTGCATCATCCGCCTTGAAAG AATATGATGTCGTTTTGAGATACAGAAGAGGTTGCATAAGCAACGACAATTTCATCACCCATCTTCATGCAGCCTTCTAC CGGAGAGGGGTCTCTCTCCGTGAAGACATCGATGAAGTGGACGCAGTTCCAGAATGTAGGGTTTTGATCATATTCTTAAC CAGCACATACGTCCCTTCCAACCTCTTAAACATTGTTGAACAACAAAGTAAAAACCCTCGAGTGGTTTATCCGATTTTTT ATGGAATATCACCATCTGATTTGATCAGTAACAGCAATTATGTGAGACCTTTTCACCAAGACGAGGCAAAAAGGTGGCAG GCTGCTTTGGAGGAAATAACTCAGATGCATGGCTACATATTGACAGATAAGTCCGAGTCTGACTTTATAGACGAGATTGT CAATGATGCTTTGGAGGTGCTACGTTCCAACTATAAGAAGAATATTATTGGGATGGATATGCAGATAAAGGAGATCCTGT CACTGTTATGCACTGAGTCTCAAGATGTTCGCCGCATAGGTATATGGGGTGCGGTTGGTATAGGAAAAACAGCCATTGCT GAAGAAATTTTCCATAGAATCTCTGTCCAATATGAGACTTGTGTCTTCCTCAAGGATCTCCATAAAGAAGTCGAGCTAAA AGGGTACGATGCTGTGAGGGAGGAACTATTGTCTAAACTTTTAGAGGTAGAACCAGATGTCATACGTACTTCAAACATTA AAATGAGTTTCTTGAGGAGCAGGCTTCAGCGTAAAAGTGCCCTCGTAGTTCTCGACGATGTGAATGATTTCAGGGATGTT GAAACCTTCGCAGAGATGCTTAGCTATTTTGGTCCAAGAAGCAGAGTAATCATAACTGGTCTGTCACCCGAGCTTTACAA GACATTGTCACTTGAGCTGGTCAAATTCTCAAATGGAAATCCTCAGGTTCTTCAGTTCTTAAGCAGATCCAGCAGAGAAT GGAAAAGTTTATCCAAAGAAATTCAAAAATCTTCAGCCATTTACATTCCAGGTATATTCGAAAGAAGCTGTTGTGGGCTT GATGAAAACGAAAAGAGTATATTTTTAGACATTGCATGTTTCTTTAGAAAGATGGATAAAGACGACGTTGCAATGTTGCT TGATGGATGTGGTTTCTCTGCACATATTGGGTTTAAAAACCTTGTTGACAAATCACTGTTAACCATATCACACAATACGG TGGACATGCTCTGGTTCCTCCAGGCAACAGGCCGAGAAATTGTTCGCCAAGAATCTATTGACAGGCCAGGACACCGCAGC AGGTTGTGGAATGCTGAAGATATTAGAGACGTATTCCTAGACAACACTGGCACGTCAGCTATTGAAGGGCTTTTCCTCGA CATGTCGCAGCTGAAATTCGATGCAAGTCCCAATGTATTCGACAAAATGTGTAATCTTAGACTGTTAAAGTTTTATTTCT CCGAGTTGATAGAGAACCATGGAGTGTCTTTACCTCAAGGTCTTGAATACTTGCCGACCAAGCTAAGGCTTCTGCACTGG GAACACTATCCTATAAGCTCATTGCCGCAATTTTTTGATCCGAAGAACCTCATAGAGCTTAACATGCCAAGTAGTTGTGT GAAGAAACTTTGGAAAGGCAAAAAGAGTCTGGAAAACCTTAAAAAGATGAGACTCAGCTACTCCTGCCAATTAACAAAGC TTCCAAGACTTACAAGTGCGCAAAACCTCGAGCTTCTTGATCTTGAAGGTTGCAAGAGTTTGGTGAGCATTAGCCACTCT ATCTGTTATCTTAAAAAGCTTGTTTCTCTGAATCTGAAGGACTGCTCGAATCTGGAGAGTGTACCATCTACAAGTGATTT AGAGTTTCTTGAGGTCTTGAATCTTTCTGGCTGCTCGAAGCTAGAGAATTTTCCGGAGATCTCACCAAATGTGAAAGAAT TGTACTTGGGTGGGACTGTAATACAAGAAATACCATCTGCGATCAAGAACTTGGTACTTCTTGAAAAACTTGACCTGGAA AACAGCAGACGCCTCGTGATTCTTCCAACGAGCATGTGCAAGTTAAAGCATCTCGAAACGCTGAATCTGTCAGGCTGCTC AAGCCTTGAGCATTTTCCAGACTTGTCTAGAAAGATGAAATGCTTAAAGTCTCTGGATTTGTGCAGGACGGCCATTAAAG AGCTACCCTCCTCCATTTCATATCTGACTGCTCTTGAAGAAGTAAGATTTGTGGGATGCAAGAGCCTCGTAAGATTGCCT GACAACGCCTGGAGCCTAAGATTCAAGGTTGAATTTCGCCAGATTGATACGGAGAAGTTTTCGAAACTGTGGAATAGATT AGGTTGGCTCAAAAAAGTTCACATCTCCTAG |
| AA seq | Len:917 aa MRQRRQLQIRGDRPSPLSVHKDSHKIKKPPPHREPVVVSSPKVIHTPLKDFRSVVPRLTGVDNSVLELEFISAFGPSASR GYQVVTIYRRGDISNDDFNKVVRRLTRNLNSVSDLSNSASEFSTPAAASSALKEYDVVLRYRRGCISNDNFITHLHAAFY RRGVSLREDIDEVDAVPECRVLIIFLTSTYVPSNLLNIVEQQSKNPRVVYPIFYGISPSDLISNSNYVRPFHQDEAKRWQ AALEEITQMHGYILTDKSESDFIDEIVNDALEVLRSNYKKNIIGMDMQIKEILSLLCTESQDVRRIGIWGAVGIGKTAIA EEIFHRISVQYETCVFLKDLHKEVELKGYDAVREELLSKLLEVEPDVIRTSNIKMSFLRSRLQRKSALVVLDDVNDFRDV ETFAEMLSYFGPRSRVIITGLSPELYKTLSLELVKFSNGNPQVLQFLSRSSREWKSLSKEIQKSSAIYIPGIFERSCCGL DENEKSIFLDIACFFRKMDKDDVAMLLDGCGFSAHIGFKNLVDKSLLTISHNTVDMLWFLQATGREIVRQESIDRPGHRS RLWNAEDIRDVFLDNTGTSAIEGLFLDMSQLKFDASPNVFDKMCNLRLLKFYFSELIENHGVSLPQGLEYLPTKLRLLHW EHYPISSLPQFFDPKNLIELNMPSSCVKKLWKGKKSLENLKKMRLSYSCQLTKLPRLTSAQNLELLDLEGCKSLVSISHS ICYLKKLVSLNLKDCSNLESVPSTSDLEFLEVLNLSGCSKLENFPEISPNVKELYLGGTVIQEIPSAIKNLVLLEKLDLE NSRRLVILPTSMCKLKHLETLNLSGCSSLEHFPDLSRKMKCLKSLDLCRTAIKELPSSISYLTALEEVRFVGCKSLVRLP DNAWSLRFKVEFRQIDTEKFSKLWNRLGWLKKVHIS* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | Leucine Rich Repeat |
| KEGG | hypothetical protein; K19613 leucine-rich repeat protein SHOC2 (A) |