Names & Information

Knowledge of BnaA09G0244700ZS:

Gene Name
BnaA09G0244700ZS
Gene Location
Gene Structure
Protein Name
Alternative splicing
Homology
Best Hit (NR)
PREDICTED: probable WRKY transcription factor 19 isoform X1 [Brassica rapa]
Best Hit (SwissProt)
Probable WRKY transcription factor 19 OS=Arabidopsis thaliana GN=WRKY19 PE=2 SV=1
NT seq
Len:3399 nt

ATGCTGCAGCCATGCGCATGGAAGCTGCGTTTTGTAAACTCGCCACCACCGATGATATTTACGTTTTCCAGGATCGAGTC
CGAGGACGGTTCTCCAATAGCAATCGAGCTCCTCGATGCCGCCACAAACGCTCGAGTCACCTCCGACTTGCGGCTCGAGA
TCGTAGCGCTGAACGCTGATATCCCCGAGGAAAGCTTCACCATCGAGGAGTTTAACAGGAATATTCTCCGACCACGGGAA
GGGAAACCACCATTGCTCGCCGGAGACCTGACCGTGACGCTTAAAGACGGGGTCGGAGTAGTCAGCGGCGACGTCACTTT
CACAGAAAATTCGAGCTGGACGAGATGCAGGTTAGGTGCTAAAGTTACACAACAAGGAGGAGTTGTGGAGGCCATAAGTA
GAGCGTTCGTGTGCAGAGATCCTCCAGGAGGAGAGTCTTATTCTGATTCTAAGGTACACGACATGACCAAACACGGAGTT
AAAGAATCATCTTCACCGGGCGGCGGCAATCAACAGCAGAAGCAGAGACGCCAGCTTCAGATCCGTGGTCATCGTCCTTC
ACCTCTCAGCATTCACAAAGACTCCCACGTTGTCAAGAAACCTCCCACGTTAACTCAGCGAGAGCCGGTGGTTGTCTCGC
CCAAGGTCGTACACACCACCATGAGTGATTTCAGGAGCGTCGTCCACCGACTCACCGGGGTTAACAACTCTGTTTCCCAA
CTACAATTTTCTGCATCATCCGCCTCTACGGATTATGAAGTCATAGTCATCTACAGGAGAGGTGACATCACCAATGATGC
TTTTGTTAAGGTCGTCCAGCGACTCACCGGGATTCCTAACTCTCTCTCTGTGCCTCTTAACTCATACGTTGAAATTGAAA
AAGGGTCCTCAAAGGATCTGCAAGACACTGAACTAAGCACATCCGCCATTAGGGAATATGATGTCGTAATCAGATACATG
AGAGGTTGCATAAGCAACGATGATTTCATCAGCCATCTTCGTGCTGCCCTCTGCCGGAGAGGGGTTTCTGTCCGAGAAGA
CATCGATGAAGTAGACACAGTTCCAGAATGTATGGTTTTGATCATATTCTTAACCAGCACATACGTCCCTTCCAACCTGC
TAAACATTGTTGAACAACAAAGTAAAAAGCCTCGAGTGGTTTACCCGATTTTTTATGGAATTTCACCATCTGATTTGATC
ACTAATAGCGAGTATTATGAGAGTTTTTTCCTCCAAGACGAGCCAAAACGATGGCAGGCTGCTTTGGAGAAAATAACTCA
GATGCATGGCTACATATTGACAGATAAGTCCGAGTCTGACTTTATAGACGAGATTGTCAATGATGCTTTGGAGGTGCTAC
GTTCCAACTATAAGAAGAATATTATTGGGATGGATACGCAGATAAAGGAGATCTTGTCACTGCTATGCATTGAGTCTCAA
GATGTTCGCCGCATAGGTATATGGGGTGCGGTTGGTATAGGAAAAACAGCCATTGCTGAAGAAATTTTCCATAGAATCTC
TGTCCAATATGAGACTTGTGTCTTCCTCAAGGATCTCCATAAAGAAGTCGAGCTAAAAGGGTACGATGCTGTGAGGGAGG
AACTATTGTCTAAACTTTTAGAGGTAGAACCAGATGTCATACGTACTTCAAACATTAAAATGAGTTTCTTGAGGAGCAGG
CTTCAGCGTAAAAGTGCCCTCGTAGTTCTCGACGATGTGAATGATTTCAGGGATGTTGAAACCCTCGCAGAGATGCTTAG
CTATTTTGGTCCAAGAAGCAGAGTAATCATAACGTCTAGGAACAGACATGTTTTTGTACTATGCAAAACCGATCATGTCT
ATGAGGTCAAGCCATTAGAATTTCCTAACTCTCTACATCTTCTGAACCCCGGAATATTTCAGAGTGGTTTGTCACCCGAG
CTTTACAAGACATTGTCACTTGAGTTGGTCAAATTCTCAAATGGAAATCCTCAGGTTCTTCAGTTCTTAAGCAGATCCAG
CAGAGAATGGAAATGTTTATCCAAAGAAATTCAAAAATCTTCAGCCATTTACATTCCAGGTATATTCGAAAGAAGCTGTT
GTGGGCTTGATGAAAACGAAAAGAGTATATTTTTAGACATTGCATGTTTCTATAGAAAGATGGATAAAGACGACGTTGCA
ATGTTGCTTGATGGATGTGGTTTCTCTGCACATATTGGGTTTAAAAACCTTGTTGACAAATCACTGTTAACCATATCACA
CAATACGGTGGACATGCTCTGGTTCCTCCAGGCAACAGGCCGAGAAATTGTTCGCCAAGAATCAATTGACAGGCCAGGAG
ACCGCAGCAGGTTGTGGAATGCTGAAGATATTAGAGACGTATTCCTAGACAACACTGGCACGTCAGCTATTGAAGGGATT
TTCCTGGACATGTCGCAGCTGAAATTCGATGCAAGTCCCAATGTATTCGACAAAATGTGTAATCTTAGACTGTTAAAGTT
TTATTTCTCCGAGTTGATAGAGAACCATGGAGTGTCTTTACCTCAAGGTCTTGAATACTTGCCGACCAAGCTAAGGCTTC
TGCACTGGGAATACTATCCTATAAGTTCATTGCCGCAATGTTTTGATCCAAAGAACCTCATAGAACTTAACATGCCAAAT
AGTTGTGTGAAGAAACTTTGGAAAGGCAAAAAGAGTCTGGAAAACCTTAAAAAGATGAGACTGAGCTACTCCTACCAGTT
AACAAAGCTTCCAAGACTTACAAGTGCGCAAAATCTCGAGCTTCTTGATCTTGAAGGTTGCAAGAGTTTGGAAAGCATTA
GCCACTCTATCTGTTATCTTAAAAATCTTGTTTCTCTGAATCTGAAGGACTGCTCGAATCTGGAGAGTGTACCATCTACA
AGTGATTTAGAGACTCTTGAGGTCTTGAATCTTTCTGGCTGCTCGAAGCTAGAGAATTTTCCGGAGATCTCACCAAATGT
GAAAGAACTGTACTTGGGTGGGACTATGATACGAGAAATACCATCATCGATCAAGAATTTGATACTTCTTGAAAAACTTG
ACCTGGAAAACAGCAGACGCCTCGTGATTCTTCCAATGAGCATATGCAAGTTAAAGCATCTCGAAACGCTGAATCTGTCA
GGCTGCTCAAGCCTTGAGTATTTTCCAGACTTCTCTAGAAAGATGAAATGCTTAAAGTCTTTGGATTTGAGCAGGACGGC
CATTAGAGAGCTACCCTCCTCCATTTCATATCTGACTGCTCTTGAAGAAGTAAGATTTGTGGGATGCAAGAGCCTCGTAA
GATTGCCTGACAACGCCTGGAGCCTAAGATTCAAGGTTGAATTCCGTCAGATTGATACAGAGAAGTTTTCGAAACTGTGG
AATAGATTAGGTTGGCTAAAAAAAGTTCACATCTCTTAG
AA seq
Len:1133 aa

MLQPCAWKLRFVNSPPPMIFTFSRIESEDGSPIAIELLDAATNARVTSDLRLEIVALNADIPEESFTIEEFNRNILRPRE
GKPPLLAGDLTVTLKDGVGVVSGDVTFTENSSWTRCRLGAKVTQQGGVVEAISRAFVCRDPPGGESYSDSKVHDMTKHGV
KESSSPGGGNQQQKQRRQLQIRGHRPSPLSIHKDSHVVKKPPTLTQREPVVVSPKVVHTTMSDFRSVVHRLTGVNNSVSQ
LQFSASSASTDYEVIVIYRRGDITNDAFVKVVQRLTGIPNSLSVPLNSYVEIEKGSSKDLQDTELSTSAIREYDVVIRYM
RGCISNDDFISHLRAALCRRGVSVREDIDEVDTVPECMVLIIFLTSTYVPSNLLNIVEQQSKKPRVVYPIFYGISPSDLI
TNSEYYESFFLQDEPKRWQAALEKITQMHGYILTDKSESDFIDEIVNDALEVLRSNYKKNIIGMDTQIKEILSLLCIESQ
DVRRIGIWGAVGIGKTAIAEEIFHRISVQYETCVFLKDLHKEVELKGYDAVREELLSKLLEVEPDVIRTSNIKMSFLRSR
LQRKSALVVLDDVNDFRDVETLAEMLSYFGPRSRVIITSRNRHVFVLCKTDHVYEVKPLEFPNSLHLLNPGIFQSGLSPE
LYKTLSLELVKFSNGNPQVLQFLSRSSREWKCLSKEIQKSSAIYIPGIFERSCCGLDENEKSIFLDIACFYRKMDKDDVA
MLLDGCGFSAHIGFKNLVDKSLLTISHNTVDMLWFLQATGREIVRQESIDRPGDRSRLWNAEDIRDVFLDNTGTSAIEGI
FLDMSQLKFDASPNVFDKMCNLRLLKFYFSELIENHGVSLPQGLEYLPTKLRLLHWEYYPISSLPQCFDPKNLIELNMPN
SCVKKLWKGKKSLENLKKMRLSYSYQLTKLPRLTSAQNLELLDLEGCKSLESISHSICYLKNLVSLNLKDCSNLESVPST
SDLETLEVLNLSGCSKLENFPEISPNVKELYLGGTMIREIPSSIKNLILLEKLDLENSRRLVILPMSICKLKHLETLNLS
GCSSLEYFPDFSRKMKCLKSLDLSRTAIRELPSSISYLTALEEVRFVGCKSLVRLPDNAWSLRFKVEFRQIDTEKFSKLW
NRLGWLKKVHIS*
Expression(FPKM)
Classification(Core/Distributed)
Function classfication (GO)
GO:0005515
Pfam
Leucine Rich Repeat
KEGG
hypothetical protein; K19613 leucine-rich repeat protein SHOC2 (A)