Names & Information
Knowledge of BnaA09G0378700NO:
| Gene Name | BnaA09G0378700NO |
|---|---|
| Gene Location | |
| Gene Structure | |
| Protein Name | |
| Alternative splicing | |
| Homology | |
| Best Hit (NR) | PREDICTED: TMV resistance protein N isoform X1 [Brassica rapa] |
| Best Hit (SwissProt) | TMV resistance protein N OS=Nicotiana glutinosa GN=N PE=1 SV=1 |
| NT seq | Len:4131 nt ATGGAGACCGAAGTCATCACCAAACCGCACAGACTCAAGTTCGACGTCTTCCTCAGCTTCCGAGGCGAAGACACGCGCCA CACCATCACCGAGCGCGTCTACGACGCTCTCCACCGAAAAGAGAAAGTCCGCGTCTTTCGCGACGACGAAGGTATGCAAC GAGGCGACGAGATCAACCCGAGCCTCGTCGCAGCCATGGAAGACTCTGCAGCCTCCGTCGTCGTTTTATCCCCACGCTAC GCTGACTCTCACTGGTGCCTTGACGAGCTAGCTACCCTCTGCGATCTGAGAGCGTCTCTGAGACGCCCGATGATACCAAT CTTCTACGAGGTTGATCCCTCGCACGTCCGTAAACAGAACGATCATTTCGCTAAGGACTTTGAAGTACATGCTAAAAGGT TTAAGGAGGAGAAGATACAGCGGTGGAGGAAAGCTATGACTTTGGTCGGAAACCTCTCTGGTTTTGTTTGCAAAGAAGAC TCTGTTGATGATGAGATGATAGGGCTTTTGGTGAAGAGGGTTTTATCTGAAGTGAGCAACACACCAGAGAACGTTGGAGA TTACACCGTTGGCTTGGAGTCACGTGTTGATGATTTGATCAATCTGGTCGACGTTAAATCCACCTCTGACGTTCAAATCC TGGGGCTTCACGGTATGGGTGGTATTGGGAAGACGACCCTTGCAAAAGCCTTTTATAACAAGATCGTTGCAGACTTCGAG CATAGAGTTTTCATCTCAAACGTTAGAGAAAGATCATCAGACCATGATGGTTTGGTTAATCTACAAAAGAGTTTGATCAA GGGGCTTCTCCGTTCGCTACCTGAAATAGAAGATGTTAACCGAGGGAGAGACAAGATAAGAGAGAGCGTTTATGAGAAGA AGATTCTTGTGGTTTTAGATGATGTTGATAAGGTAGACCAAGTTGATGCGCTGGTTGGTGAAAAAAGTTGGTATAGTGAA GGAAGTCTTATAGTCATCACTACAAGAGATGAAGATATTCTGAGTAAGGTCTTAGTGAAGCAAAAGTATGAAGTCAGGTG CTTGAATGAGGAGCAGGCCTTGAAGCTGTTTAGTTATCATTCACTACGGAAAGAAAAACCAACAGAGAGTTTACTAGAGC TGTCCAAGAAGATTGTCAAGATATCAGGACTATTACCACTAGCACTTGAAGTGTTTGGATCTCTTTTGTATGACAAGAAG GAGGCAAAAGAATGGCAAACTCAGCTAGAGAAGCTCAAAAACACTCAACCAGGCAATCTTCAGGATGTTCTGAAGCTGAG TTTTGATTCTTTAGACGATGAGGAGAAGAATGTGTTCCTGGATATTGCCTGTCTCTTTCTTAAAATGCAGATAAAGAAAG AAGAAATCGTCGACGTACTGAATGGTTGTGGGTTTAACGCCGAGGCTGCTCTCAGTGTCCTCAGACAGAAGTCTCTTGTT AAGTTCTTGTCAGACGAGAATCTTTGGATGCATGATCAGATTCGAGACATGGGAAGGCAGTTAGACCTTAAAGAAACCCC TGGGGATACTAGAATGCGGAGTAGACTCTGGGACCGTGCTGAAATCATGACTGTATTGAACAATATGAAGGGAACATCAT CCATCCAAGGAATTGTACTTGACTTTAAAAAGAAGTTAGCAACAGATCCAAGTGCAGATAACATTGCGTTGGGGAATCTA CATGACAATCCAGGCATCAGAGCTGTGTTTAGTTACCTGAAGAATAAGTTTGTAGGATTTCCAGCAGAGGAAAAGCCAAA AAGCTCTGAGAACACCATTCCTGTAGAGCCTTTTGTACCAATGACAAAGTTGAGACTCCTTCAGATTAATCATGTGGAGC TGGCAGGGAATCTTGAACGTCTTCCATCTGAACTCAAGTGGATACAGTGGAGAGGCTGTCCATTAAAGGAGGTACCACTC AATCTTCTTGCTCGGCAACTTGCTGTTCTTGATCTTGCTGAGAGTGCAATAAGACGCATCCAGAGTCTGCACATCGAAGG GGTGGATGGAAACTTGAAGGTTGTAAACTTGCGTGGCTGTCATAGCTTAGAAGCCGTTCCTGATTTATCAAACCATAAGT TCTTAGAGAAGCTTGTCTTTGAACGATGCATGCGTCTGGTGGAAGTTCCAAGTTCAGTTGGTAATTTGAGAACATTACTT CACCTGGATTTAAGAAACTGTCCTAACCTCACTGAGTTTCTTGTGGATGTTTCTGGACTGAAGAGTCTTGAAAAGCTTTA CCTCTCTGGCTGTTCAAGTCTGAGTGTGTTACCAGAAAACATTGGTCTCATGCCATGTTTGAAAGAGCTTTTTCTTGATG CAACTGGGATAAAGGAGTTACCAGACTCTATTTTTCGCCTCGAAAATCTTCAAAAGCTTAGCCTAAAGAGCTGCAGATCT ATTCAAGAACTTCCTATGTGCATAGGAACATTGACATCACTGGAAGAGCTAGATCTGAGTAGCACTTCACTGCAAAGTCT TCCGAGTTCTATAGGAGATTTAAAAAATCTCCAGAAGCTGAGTTTGATGCACTGTGCATCCCTTTCTAAGATACCTGACA CTATTAAGGAGCTCAAATCACTGAAGAAACTATTTATCTACGGAAGTGCAGTGGAGGAGCTGCCTCTAAGCCTAGGCTCA CTGCCATGTTTGACTGACTTTTCAGCAGGAGAATGCAAACTTCTGAAGCATGTTCCAAGTTCAATTGGTGGATTAAATTC TCTTCTAGAACTTGAGTTGGATTGGACACCAATTGAAACTCTACCAGCAGAGATTGGTGACTTGCACTTTATTCAAAAAC TTGGGTTGAGGAACTGCAAGTCTCTGAAGGCTCTGCCTGAATCAATAGGAAACATGGACACACTCCATAGCTTGTTCCTT ACAGGCGCTAACATTGAGAAACTGCCTGAAACTTTTGGCAAGCTTGAAAACCTAGACACACTCCGAATGGACAACTGTAA AATGATCAAGAGGCTTCCTGAATCATTTGGAGACTTGAAATCGCTTCACGATCTGTACATGAAGGAAACTTCGGTGGTAG AGCTGCCAGAAAGTTTTGGAAACCTCTCAAATCTAAGGGTATTGAAGATACTGAAGAAGCCTCTCTTTAGAAGTTCTCCA GGTACAAGTGAAGAACCTAGTTTTGTTGAAGTACCAAACTCTTTCTCAAACCTCTTGTCACTTGAGGAGATAGATGCTAA AGGTTGGGGGATATGGGGTAAAGTACCTGATGATCTTGGGAAGCTTTCATCTCTCAAGAAACTAGAACTGGGGAATAACT ATTTTCACAGTCTTCCATCTAGCCTTGAGGGGTTATGGAATCTTAAATTATTTACATTGTATGACTGCCAAGAGCTGAAG TGTCTCCCCCCTCTTCCGTGGAAACTGGAGAAGCTAAACCTGGCAAACTGCTTTGCGTTGGAGAGTATAGCAGACCTCTC AAAGCTGGAGATCTTGGAAGAGCTCAATCTCACAAACTGTGGGAAAGTGGATGATGTTCCAGGCCTAGAGCATTTGAAGG CTCTGAAAAGGTTATACATGAGCGGCTGCAACTCTAGGCTCTCTGTTGCAGTCAAGAAAAGACTTTCCAAGGCTTCTTTG AAAATGATGAGGAATCTGAGCTTACCTGGGAACAGAATCCCTGACTGGTTTTCACAAGGCCCTCTCACATTCTCTCCTCA ACCCAACAGAGAGCTCAGAGGCGTAATCCTGGCCGTTGTTGTGGCTCTTAACCAAGACTGCATAGATGACTACCAGCTGC CTGATGTGATGGAGGTTCAAGCACAAATTCTAGAACTTGATTCACCCTTATACACCCACACATTGCACCTCTTTGGAGTG CCAAGAACAAGTGATGATCAACTCCACATCTGCCGATACCCAACTTTGCACCCAATGGTTTGGACATTTAGAGATGGGTA CACCATACAAGTTGTTAAACGAGAACCACCAATCAAACAAGGCGTTGAGCTAAAGATGCATGGGATTCATCTTGTTTATG AAGGGGATGATGATTTTAAAGGTGAAGAACATGTATTGAACGAGACACAGCTCACTGTCTCTCAGAAGCTTGCCAATTTT TTCAGATCTTTTGAAGAAGGTGAAGCCAGCTCAGAAAGTGAATCTGCTTGA |
| AA seq | Len:1377 aa METEVITKPHRLKFDVFLSFRGEDTRHTITERVYDALHRKEKVRVFRDDEGMQRGDEINPSLVAAMEDSAASVVVLSPRY ADSHWCLDELATLCDLRASLRRPMIPIFYEVDPSHVRKQNDHFAKDFEVHAKRFKEEKIQRWRKAMTLVGNLSGFVCKED SVDDEMIGLLVKRVLSEVSNTPENVGDYTVGLESRVDDLINLVDVKSTSDVQILGLHGMGGIGKTTLAKAFYNKIVADFE HRVFISNVRERSSDHDGLVNLQKSLIKGLLRSLPEIEDVNRGRDKIRESVYEKKILVVLDDVDKVDQVDALVGEKSWYSE GSLIVITTRDEDILSKVLVKQKYEVRCLNEEQALKLFSYHSLRKEKPTESLLELSKKIVKISGLLPLALEVFGSLLYDKK EAKEWQTQLEKLKNTQPGNLQDVLKLSFDSLDDEEKNVFLDIACLFLKMQIKKEEIVDVLNGCGFNAEAALSVLRQKSLV KFLSDENLWMHDQIRDMGRQLDLKETPGDTRMRSRLWDRAEIMTVLNNMKGTSSIQGIVLDFKKKLATDPSADNIALGNL HDNPGIRAVFSYLKNKFVGFPAEEKPKSSENTIPVEPFVPMTKLRLLQINHVELAGNLERLPSELKWIQWRGCPLKEVPL NLLARQLAVLDLAESAIRRIQSLHIEGVDGNLKVVNLRGCHSLEAVPDLSNHKFLEKLVFERCMRLVEVPSSVGNLRTLL HLDLRNCPNLTEFLVDVSGLKSLEKLYLSGCSSLSVLPENIGLMPCLKELFLDATGIKELPDSIFRLENLQKLSLKSCRS IQELPMCIGTLTSLEELDLSSTSLQSLPSSIGDLKNLQKLSLMHCASLSKIPDTIKELKSLKKLFIYGSAVEELPLSLGS LPCLTDFSAGECKLLKHVPSSIGGLNSLLELELDWTPIETLPAEIGDLHFIQKLGLRNCKSLKALPESIGNMDTLHSLFL TGANIEKLPETFGKLENLDTLRMDNCKMIKRLPESFGDLKSLHDLYMKETSVVELPESFGNLSNLRVLKILKKPLFRSSP GTSEEPSFVEVPNSFSNLLSLEEIDAKGWGIWGKVPDDLGKLSSLKKLELGNNYFHSLPSSLEGLWNLKLFTLYDCQELK CLPPLPWKLEKLNLANCFALESIADLSKLEILEELNLTNCGKVDDVPGLEHLKALKRLYMSGCNSRLSVAVKKRLSKASL KMMRNLSLPGNRIPDWFSQGPLTFSPQPNRELRGVILAVVVALNQDCIDDYQLPDVMEVQAQILELDSPLYTHTLHLFGV PRTSDDQLHICRYPTLHPMVWTFRDGYTIQVVKREPPIKQGVELKMHGIHLVYEGDDDFKGEEHVLNETQLTVSQKLANF FRSFEEGEASSESESA* |
| Expression(FPKM) | |
| Classification(Core/Distributed) | |
| Function classfication (GO) | GO:0005515 |
| Pfam | - |
| KEGG | leucine-rich repeat-containing protein, putative; K19613 leucine-rich repeat protein SHOC2 (A) |